{ stdenv, fetchFromGitHub, cmake, makeWrapper, perlPackages, libminc, EBTKS }: stdenv.mkDerivation rec { pname = "N3"; version = "unstable-2018-08-09"; src = fetchFromGitHub { owner = "BIC-MNI"; repo = pname; rev = "010fc2ac58ce1d67b8e6a863fac0809d3203cb9b"; sha256 = "06hci7gzhy8p34ggvx7gah2k9yxpwhgmq1cgw8pcd1r82g4rg6kd"; }; nativeBuildInputs = [ cmake makeWrapper ]; buildInputs = [ libminc EBTKS ]; propagatedBuildInputs = with perlPackages; [ perl MNI-Perllib GetoptTabular ]; cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/cmake" "-DEBTKS_DIR=${EBTKS}/lib/" ]; postFixup = '' for p in $out/bin/*; do wrapProgram $p --prefix PERL5LIB : $PERL5LIB done ''; meta = with stdenv.lib; { homepage = "https://github.com/BIC-MNI/N3"; description = "MRI non-uniformity correction for MINC files"; maintainers = with maintainers; [ bcdarwin ]; platforms = platforms.unix; license = licenses.free; }; }