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authorBen Darwin <bcdarwin@gmail.com>2020-06-18 18:25:14 -0400
committerBen Darwin <bcdarwin@gmail.com>2020-07-06 11:09:33 -0400
commit28becad9bee2c8d56571a701b0f10a8b5cd9bcac (patch)
treeb200a54a7a7f21616fec56af7726330088729b96 /pkgs/applications/science/biology/minc-tools
parentadbace3c212a64cfa151590f907965aa3eaabf8b (diff)
minc-tools: actually build Nifti support
Diffstat (limited to 'pkgs/applications/science/biology/minc-tools')
-rw-r--r--pkgs/applications/science/biology/minc-tools/default.nix14
1 files changed, 9 insertions, 5 deletions
diff --git a/pkgs/applications/science/biology/minc-tools/default.nix b/pkgs/applications/science/biology/minc-tools/default.nix
index db803ea4922f0..b2029842bbba3 100644
--- a/pkgs/applications/science/biology/minc-tools/default.nix
+++ b/pkgs/applications/science/biology/minc-tools/default.nix
@@ -14,15 +14,19 @@ stdenv.mkDerivation rec {
 
   patches = [ ./fix-netcdf-header.patch ];
 
+  # add missing CMake module to build NIFTI support
+  # (the maintainers normally build libminc and minc-tools in a meta-project)
+  postPatch = ''
+    cp ${libminc.src}/cmake-modules/FindNIFTI.cmake cmake-modules
+  '';
+
   nativeBuildInputs = [ cmake flex bison makeWrapper ];
-  buildInputs = [ libminc libjpeg zlib ];
+  buildInputs = [ libminc libjpeg nifticlib zlib ];
   propagatedBuildInputs = [ perl TextFormat ];
 
   cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/"
-                 "-DZNZ_INCLUDE_DIR=${nifticlib}/include/"
-                 "-DZNZ_LIBRARY=${nifticlib}/lib/libznz.a"
-                 "-DNIFTI_INCLUDE_DIR=${nifticlib}/include/nifti/"
-                 "-DNIFTI_LIBRARY=${nifticlib}/lib/libniftiio.a" ];
+                 "-DZNZ_INCLUDE_DIR=${nifticlib}/include/nifti"
+                 "-DNIFTI_INCLUDE_DIR=${nifticlib}/include/nifti" ];
 
   postFixup = ''
     for prog in minccomplete minchistory mincpik; do