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| author | Matthew Bauer <mjbauer95@gmail.com> | 2018-11-18 14:33:09 -0600 |
|---|---|---|
| committer | Matthew Bauer <mjbauer95@gmail.com> | 2018-11-18 19:31:02 -0600 |
| commit | 2c47a4229f3b3c22b4d7d337694dcf2067b41594 (patch) | |
| tree | e8310cc87adf9766376912a52798b6f7687d9946 /pkgs/applications/science/biology | |
| parent | f6f7283e692111603b15bae48026432469b85085 (diff) | |
treewide: remove ctest usages
These are already in the generated makefiles!
Diffstat (limited to 'pkgs/applications/science/biology')
5 files changed, 0 insertions, 11 deletions
diff --git a/pkgs/applications/science/biology/EZminc/default.nix b/pkgs/applications/science/biology/EZminc/default.nix index 20d88eb3aafb9..dbcfead6b1ea2 100644 --- a/pkgs/applications/science/biology/EZminc/default.nix +++ b/pkgs/applications/science/biology/EZminc/default.nix @@ -18,8 +18,6 @@ stdenv.mkDerivation rec { pname = "EZminc"; "-DEZMINC_BUILD_MRFSEG=TRUE" "-DEZMINC_BUILD_DD=TRUE" ]; - checkPhase = "ctest --output-on-failure ../tests/"; # but ctest doesn't find the tests ... - enableParallelBuilding = true; meta = with stdenv.lib; { diff --git a/pkgs/applications/science/biology/N3/default.nix b/pkgs/applications/science/biology/N3/default.nix index c14846beec2fd..3502ac3e51b7d 100644 --- a/pkgs/applications/science/biology/N3/default.nix +++ b/pkgs/applications/science/biology/N3/default.nix @@ -19,9 +19,6 @@ stdenv.mkDerivation rec { cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/" "-DEBTKS_DIR=${EBTKS}/lib/" ]; - checkPhase = "ctest --output-on-failure"; - # don't run the tests as they fail at least due to missing program wrappers in this phase ... - postFixup = '' for p in $out/bin/*; do wrapProgram $p --prefix PERL5LIB : $PERL5LIB diff --git a/pkgs/applications/science/biology/ants/default.nix b/pkgs/applications/science/biology/ants/default.nix index 0b8ddd0d4fb93..f54bd9af02882 100644 --- a/pkgs/applications/science/biology/ants/default.nix +++ b/pkgs/applications/science/biology/ants/default.nix @@ -21,8 +21,6 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; - checkPhase = "ctest"; - postInstall = '' for file in $out/bin/*; do wrapProgram $file --set ANTSPATH "$out/bin" diff --git a/pkgs/applications/science/biology/inormalize/default.nix b/pkgs/applications/science/biology/inormalize/default.nix index f17143ad06bbc..7ba054a592eab 100644 --- a/pkgs/applications/science/biology/inormalize/default.nix +++ b/pkgs/applications/science/biology/inormalize/default.nix @@ -21,8 +21,6 @@ stdenv.mkDerivation rec { cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/" "-DEBTKS_DIR=${EBTKS}/lib/" ]; - checkPhase = "ctest --output-on-failure"; # but no tests - postFixup = '' for p in $out/bin/*; do wrapProgram $p --prefix PERL5LIB : $PERL5LIB diff --git a/pkgs/applications/science/biology/minc-tools/default.nix b/pkgs/applications/science/biology/minc-tools/default.nix index 8e1f74686d1f8..c680eda95d2f7 100644 --- a/pkgs/applications/science/biology/minc-tools/default.nix +++ b/pkgs/applications/science/biology/minc-tools/default.nix @@ -17,8 +17,6 @@ stdenv.mkDerivation rec { cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/" ]; - checkPhase = "ctest --output-on-failure"; # still some weird test failures though - postFixup = '' for prog in minccomplete minchistory mincpik; do wrapProgram $out/bin/$prog --prefix PERL5LIB : $PERL5LIB |