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authorgithub-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>2024-07-01 00:16:16 +0000
committerGitHub <noreply@github.com>2024-07-01 00:16:16 +0000
commite37016f618f13c9397ce2d6e7e58b9b602f82fe9 (patch)
tree764196fa81476f91a8c6fb0f139a28b29a11d81f /pkgs/applications/science
parent01da4c59cc4879540b7a5d73230475b4616a0dc8 (diff)
parentc00f20377be57a37df5cf7986198aab6051c0057 (diff)
Merge master into haskell-updates
Diffstat (limited to 'pkgs/applications/science')
-rw-r--r--pkgs/applications/science/biology/gatk/default.nix4
-rw-r--r--pkgs/applications/science/biology/picard-tools/default.nix4
-rw-r--r--pkgs/applications/science/logic/cbmc/default.nix4
-rw-r--r--pkgs/applications/science/math/fricas/default.nix4
4 files changed, 8 insertions, 8 deletions
diff --git a/pkgs/applications/science/biology/gatk/default.nix b/pkgs/applications/science/biology/gatk/default.nix
index 41623bf640dda..50dc0613c743f 100644
--- a/pkgs/applications/science/biology/gatk/default.nix
+++ b/pkgs/applications/science/biology/gatk/default.nix
@@ -2,10 +2,10 @@
 
 stdenv.mkDerivation rec {
   pname = "gatk";
-  version = "4.5.0.0";
+  version = "4.6.0.0";
   src = fetchzip {
     url = "https://github.com/broadinstitute/gatk/releases/download/${version}/gatk-${version}.zip";
-    sha256 = "sha256-c3YZsSCjZY75jooiqtc8x/xsWTvYm9labUcOydDlSRQ=";
+    sha256 = "sha256-AwGRkgVbG2gA4K1JG0WPr4v18JHG5YzYUKdJ2EJZX+Y=";
   };
 
   nativeBuildInputs = [ makeWrapper ];
diff --git a/pkgs/applications/science/biology/picard-tools/default.nix b/pkgs/applications/science/biology/picard-tools/default.nix
index 880ea77e9d245..e8786fe4b9c0e 100644
--- a/pkgs/applications/science/biology/picard-tools/default.nix
+++ b/pkgs/applications/science/biology/picard-tools/default.nix
@@ -2,11 +2,11 @@
 
 stdenv.mkDerivation rec {
   pname = "picard-tools";
-  version = "3.1.1";
+  version = "3.2.0";
 
   src = fetchurl {
     url = "https://github.com/broadinstitute/picard/releases/download/${version}/picard.jar";
-    sha256 = "sha256-FcefUf0KwAEEn53XubrB2991ncsCMKicf20fJG6LurQ=";
+    sha256 = "sha256-4lj6Lj9fphzWeZ7I4HP0mpX73OrxY9imCXGyYZuG+kE=";
   };
 
   nativeBuildInputs = [ makeWrapper ];
diff --git a/pkgs/applications/science/logic/cbmc/default.nix b/pkgs/applications/science/logic/cbmc/default.nix
index 0a81b2a09ef1d..c980e84f9d9f6 100644
--- a/pkgs/applications/science/logic/cbmc/default.nix
+++ b/pkgs/applications/science/logic/cbmc/default.nix
@@ -13,13 +13,13 @@
 
 stdenv.mkDerivation rec {
   pname = "cbmc";
-  version = "6.0.0";
+  version = "6.0.1";
 
   src = fetchFromGitHub {
     owner = "diffblue";
     repo = pname;
     rev = "${pname}-${version}";
-    sha256 = "sha256-mPRkkKN7Hz9Qi6a3fEwVFh7a9OaBFcksNw9qwNOarao=";
+    sha256 = "sha256-7syRpCNL7TRZoJaNrmAdahNy7IyovyniYyOwD/lzhuw=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/applications/science/math/fricas/default.nix b/pkgs/applications/science/math/fricas/default.nix
index 9f0b87f011a10..43a00a5e1fbac 100644
--- a/pkgs/applications/science/math/fricas/default.nix
+++ b/pkgs/applications/science/math/fricas/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   pname = "fricas";
-  version = "1.3.10";
+  version = "1.3.11";
 
   src = fetchFromGitHub {
     owner = "fricas";
     repo = "fricas";
     rev = version;
-    sha256 = "sha256-T1xDndDnHq/hmhTWWO3Eu0733u8+C8sJMCF6pbLU2GI=";
+    sha256 = "sha256-EX/boSs6rK4RrJ5W6Rd0TSHsbQsNiFI1evFuNPBMeu8=";
   };
 
   buildInputs = [ sbcl libX11 libXpm libICE libSM libXt libXau libXdmcp ];