Merge branch 'staging-next' into staging

3 files changed, 7 insertions, 10 deletions

diff --git a/pkgs/applications/science/biology/seqkit/default.nix b/pkgs/applications/science/biology/seqkit/default.nix
index 1c572ba563541..5c46e25f5d6de 100644
--- a/pkgs/applications/science/biology/seqkit/default.nix
+++ b/pkgs/applications/science/biology/seqkit/default.nix
@@ -5,13 +5,13 @@
 
 buildGoModule rec {
   pname = "seqkit";
-  version = "2.8.0";
+  version = "2.8.1";
 
   src = fetchFromGitHub {
     owner = "shenwei356";
     repo = "seqkit";
     rev = "v${version}";
-    sha256 = "sha256-JsrmRUbSNCFJ58tIblKq+VRXCD1mBeCAcosDGiVb5Gs=";
+    sha256 = "sha256-LtPf99spy2ByTnSMJ5k1mWkh+Nct3Fg4Y9mXARxuXlA=";
   };
 
   vendorHash = "sha256-0//kySYhNmfiwiys/Ku0/8RzKpnxO0+byD8pcIkvDY0=";
diff --git a/pkgs/applications/science/electronics/nvc/default.nix b/pkgs/applications/science/electronics/nvc/default.nix
index a72043de38339..9bab9991baf82 100644
--- a/pkgs/applications/science/electronics/nvc/default.nix
+++ b/pkgs/applications/science/electronics/nvc/default.nix
@@ -15,13 +15,13 @@
 
 stdenv.mkDerivation rec {
   pname = "nvc";
-  version = "1.11.3";
+  version = "1.12.0";
 
   src = fetchFromGitHub {
     owner = "nickg";
     repo = "nvc";
     rev = "r${version}";
-    hash = "sha256-Z4YxXPf8uKlASSK9v6fbtHtkUibc9EeA4i+3kD/vBmY=";
+    hash = "sha256-7g4Ki5lhmX/13XCv0on1PgvEthCTfe9wh8EFjMcP1+c=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/applications/science/math/polymake/default.nix b/pkgs/applications/science/math/polymake/default.nix
index fe9210641d2e7..9c2623651517d 100644
--- a/pkgs/applications/science/math/polymake/default.nix
+++ b/pkgs/applications/science/math/polymake/default.nix
@@ -14,14 +14,11 @@
 , ninja
 , ant
 , openjdk
-, perl536Packages
+, perl
+, perlPackages
 , makeWrapper
 }:
-let
-  # log says: polymake does not work with perl 5.37 or newer;
-  perlPackages = perl536Packages;
-  inherit (perlPackages) perl;
-in
+
 # polymake compiles its own version of sympol and atint because we
 # don't have those packages. other missing optional dependencies:
 # javaview, libnormaliz, scip, soplex, jreality.