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authorVincent Laporte <Vincent.Laporte@gmail.com>2020-12-08 21:50:14 +0100
committerVincent Laporte <vbgl@users.noreply.github.com>2020-12-18 21:03:56 +0100
commitb6f7f1f673046ad2851728cb8f3a2f0888a1dcf0 (patch)
treedc783d933b1a6d807d5c49afcf1fa0f9395cf515 /pkgs/development/ocaml-modules/phylogenetics
parentc2e90c4433dacac61fd8f61ce6171c54acab2fc2 (diff)
ocamlPackages.janeStreet: 0.13 → 0.14
ocamlPackages.biocaml: 0.10.1 → 0.11.1

ocamlPackages.bistro: fix for Core 0.14

ocamlPackages.js_of_ocaml: 3.7.0 → 3.7.1

ocamlPackages.ocaml-r: 0.2.0 → 0.4.0

ocamlPackages.phylogenetics: 2020-01-25 → 2020-11-23

Co-authored-by: sternenseemann <0rpkxez4ksa01gb3typccl0i@systemli.org>
Diffstat (limited to 'pkgs/development/ocaml-modules/phylogenetics')
-rw-r--r--pkgs/development/ocaml-modules/phylogenetics/default.nix11
1 files changed, 6 insertions, 5 deletions
diff --git a/pkgs/development/ocaml-modules/phylogenetics/default.nix b/pkgs/development/ocaml-modules/phylogenetics/default.nix
index 1873a4e0c583b..27b6ed3f986bb 100644
--- a/pkgs/development/ocaml-modules/phylogenetics/default.nix
+++ b/pkgs/development/ocaml-modules/phylogenetics/default.nix
@@ -1,23 +1,24 @@
 { stdenv, buildDunePackage, fetchFromGitHub, ppx_deriving
-, alcotest, biocaml, gnuplot, lacaml, menhir, ocaml-r, owl, printbox }:
+, alcotest, angstrom-unix, biocaml, gnuplot, gsl, lacaml, menhir, owl, printbox }:
 
 buildDunePackage rec {
   pname = "phylogenetics";
-  version = "unstable-2020-01-25";
+  version = "unstable-2020-11-23";
 
   useDune2 = true;
 
   src = fetchFromGitHub {
     owner  = "biocaml";
     repo   = pname;
-    rev    = "752a7d0324709ba919ef43630a270afd45d6b734";
-    sha256 = "1zsxpl1yjbw6y6n1q7qk3h0l7c0lxhh8yp8bkxlwnpzlkqq28ycg";
+    rev    = "e6e10efa0a3a8fd61bf4ab69e91a09549cc1ded6";
+    sha256 = "0pmypzp0rvlpzm8zpbcfkphwnhrpyfwfv44kshvx2f8nslmksh8c";
   };
 
   minimumOCamlVersion = "4.08";  # e.g., uses Float.min
 
   checkInputs = [ alcotest ];
-  propagatedBuildInputs = [ biocaml gnuplot lacaml menhir ocaml-r owl ppx_deriving printbox ];
+  buildInputs = [ menhir ];
+  propagatedBuildInputs = [ angstrom-unix biocaml gnuplot gsl lacaml owl ppx_deriving printbox ];
 
   doCheck = false;  # many tests require bppsuite