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authorJustin Bedo <cu@cua0.org>2022-05-06 10:53:50 +1000
committerJustin Bedo <cu@cua0.org>2022-05-06 10:54:43 +1000
commit72c388eed4e12a591833e3c51e419b1af678cee6 (patch)
tree89230adcfbd5afd483d54593e7cca4d8da21acfb /pkgs/development/r-modules/default.nix
parentdb5e7f7a928f9504ece7dfccce9f52dc36360fbb (diff)
rPackages.Rhdf5lib: fix build
Patch is no-longer necessary; HDF5 no-longer vendored
Diffstat (limited to 'pkgs/development/r-modules/default.nix')
-rw-r--r--pkgs/development/r-modules/default.nix6
1 files changed, 1 insertions, 5 deletions
diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix
index c8f8934e866a1..3993701677626 100644
--- a/pkgs/development/r-modules/default.nix
+++ b/pkgs/development/r-modules/default.nix
@@ -389,7 +389,7 @@ let
     Rglpk = [ pkgs.glpk ];
     RGtk2 = [ pkgs.gtk2.dev ];
     rhdf5 = [ pkgs.zlib ];
-    Rhdf5lib = [ pkgs.zlib.dev ];
+    Rhdf5lib = with pkgs; [ zlib.dev hdf5.dev ];
     Rhpc = with pkgs; [ zlib bzip2.dev icu xz.dev mpi pcre.dev ];
     Rhtslib = with pkgs; [ zlib.dev automake autoconf bzip2.dev xz.dev curl.dev ];
     rjags = [ pkgs.jags ];
@@ -997,10 +997,6 @@ let
       patchPhase = "patchShebangs configure";
     });
 
-    Rhdf5lib = old.Rhdf5lib.overrideDerivation (attrs: {
-      patches = [ ./patches/Rhdf5lib.patch ];
-    });
-
     rJava = old.rJava.overrideDerivation (attrs: {
       preConfigure = ''
         export JAVA_CPPFLAGS=-I${pkgs.jdk}/include/