diff options
| -rw-r--r-- | pkgs/applications/science/biology/samtools/default.nix | 13 | ||||
| -rw-r--r-- | pkgs/development/libraries/science/biology/htslib/default.nix | 4 |
2 files changed, 4 insertions, 13 deletions
diff --git a/pkgs/applications/science/biology/samtools/default.nix b/pkgs/applications/science/biology/samtools/default.nix index c72dd1b19077d..5e18d5ead58a5 100644 --- a/pkgs/applications/science/biology/samtools/default.nix +++ b/pkgs/applications/science/biology/samtools/default.nix @@ -2,22 +2,13 @@ stdenv.mkDerivation rec { pname = "samtools"; - version = "1.13"; + version = "1.17"; src = fetchurl { url = "https://github.com/samtools/samtools/releases/download/${version}/${pname}-${version}.tar.bz2"; - sha256 = "sha256-YWyi4FHMgAmh6cAc/Yx8r4twkW3f9m87dpFAeUZfjGA="; + sha256 = "sha256-Ot85C2KCGf1kCPFGAqTEqpDmPhizldrXIqtRlDiipyk"; }; - patches = [ - # Pull upstream patch for ncurses-6.3 support - (fetchpatch { - name = "ncurses-6.3.patch"; - url = "https://github.com/samtools/samtools/commit/396ef20eb0854d6b223c3223b60bb7efe42301f7.patch"; - sha256 = "sha256-p0l9ymXK9nqL2w8EytbW+qeaI7dD86IQgIVxacBj838="; - }) - ]; - # tests require `bgzip` from the htslib package nativeCheckInputs = [ htslib ]; diff --git a/pkgs/development/libraries/science/biology/htslib/default.nix b/pkgs/development/libraries/science/biology/htslib/default.nix index 219c06ce57ad0..a3b35d55c9e8a 100644 --- a/pkgs/development/libraries/science/biology/htslib/default.nix +++ b/pkgs/development/libraries/science/biology/htslib/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "htslib"; - version = "1.16"; + version = "1.17"; src = fetchurl { url = "https://github.com/samtools/htslib/releases/download/${version}/${pname}-${version}.tar.bz2"; - sha256 = "sha256-YGt8ev9zc0zwM+zRVvQFKfpXkvVFJJUqKJOMoIkNeSQ="; + sha256 = "sha256-djd5KIxA8HZG7HrZi5bDeMc5Fx0WKtmDmIaHg7chg58"; }; # perl is only used during the check phase. |