diff options
| -rw-r--r-- | pkgs/applications/science/biology/kallisto/default.nix | 19 |
1 files changed, 11 insertions, 8 deletions
diff --git a/pkgs/applications/science/biology/kallisto/default.nix b/pkgs/applications/science/biology/kallisto/default.nix index 16639db178163..de93ae5d78291 100644 --- a/pkgs/applications/science/biology/kallisto/default.nix +++ b/pkgs/applications/science/biology/kallisto/default.nix @@ -1,25 +1,28 @@ -{ stdenv, fetchFromGitHub, cmake, hdf5, zlib }: +{ stdenv, fetchFromGitHub, autoconf, cmake, hdf5, zlib }: stdenv.mkDerivation rec { pname = "kallisto"; - version = "0.43.1"; + version = "0.46.0"; src = fetchFromGitHub { repo = "kallisto"; owner = "pachterlab"; rev = "v${version}"; - sha256 = "04697pf7jvy7vw126s1rn09q4iab9223jvb1nb0jn7ilwkq7pgwz"; + sha256 = "09vgdqwpigl4x3sdw5vjfyknsllkli339mh8xapbf7ldm0jldfn9"; }; - nativeBuildInputs = [ cmake ]; - + nativeBuildInputs = [ autoconf cmake ]; + buildInputs = [ hdf5 zlib ]; + # Parallel build fails in some cases: https://github.com/pachterlab/kallisto/issues/160 + enableParallelBuilding = false; + meta = with stdenv.lib; { - description = "kallisto is a program for quantifying abundances of transcripts from RNA-Seq data"; - homepage = https://pachterlab.github.io/kallisto; + description = "Kallisto is a program for quantifying abundances of transcripts from RNA-Seq data"; + homepage = "https://pachterlab.github.io/kallisto"; license = licenses.bsd2; platforms = platforms.linux; - maintainers = [ maintainers.arcadio ]; + maintainers = with maintainers; [ arcadio ]; }; } |