diff options
Diffstat (limited to 'pkgs/applications/science/biology/conglomerate/default.nix')
-rw-r--r-- | pkgs/applications/science/biology/conglomerate/default.nix | 62 |
1 files changed, 47 insertions, 15 deletions
diff --git a/pkgs/applications/science/biology/conglomerate/default.nix b/pkgs/applications/science/biology/conglomerate/default.nix index d9092b9eeb11b..0d140914638e7 100644 --- a/pkgs/applications/science/biology/conglomerate/default.nix +++ b/pkgs/applications/science/biology/conglomerate/default.nix @@ -1,20 +1,47 @@ -{ lib, stdenv, fetchFromGitHub, cmake, coreutils, perlPackages, bicpl, libminc, zlib, minc_tools, - makeWrapper }: +{ + lib, + stdenv, + fetchFromGitHub, + cmake, + coreutils, + perlPackages, + bicpl, + libminc, + zlib, + minc_tools, + makeWrapper, +}: stdenv.mkDerivation rec { pname = "conglomerate"; - version = "unstable-2017-09-10"; + version = "unstable-2023-01-19"; src = fetchFromGitHub { - owner = "BIC-MNI"; - repo = pname; - rev = "7343238bc6215942c7ecc885a224f24433a291b0"; - sha256 = "1mlqgmy3jc13bv7d01rjwldxq0p4ayqic85xcl222hhifi3w2prr"; + owner = "BIC-MNI"; + repo = pname; + rev = "6fb26084f2871a85044e2e4afc868982702b40ed"; + hash = "sha256-Inr4b2bxguzkcRQBURObsQQ0Rb3H/Zz6hEzNRd+IX3w="; }; - nativeBuildInputs = [ cmake makeWrapper ]; - buildInputs = [ libminc zlib bicpl ]; - propagatedBuildInputs = [ coreutils minc_tools ] ++ (with perlPackages; [ perl GetoptTabular MNI-Perllib ]); + nativeBuildInputs = [ + cmake + makeWrapper + ]; + buildInputs = [ + libminc + zlib + bicpl + ]; + propagatedBuildInputs = + [ + coreutils + minc_tools + ] + ++ (with perlPackages; [ + perl + GetoptTabular + MNI-Perllib + ]); cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/cmake" @@ -23,15 +50,20 @@ stdenv.mkDerivation rec { postFixup = '' for p in $out/bin/*; do - wrapProgram $p --prefix PERL5LIB : $PERL5LIB --set PATH "${lib.makeBinPath [ coreutils minc_tools ]}"; + wrapProgram $p --prefix PERL5LIB : $PERL5LIB --set PATH "${ + lib.makeBinPath [ + coreutils + minc_tools + ] + }"; done ''; - meta = with lib; { + meta = { homepage = "https://github.com/BIC-MNI/conglomerate"; description = "More command-line utilities for working with MINC files"; - maintainers = with maintainers; [ bcdarwin ]; - platforms = platforms.unix; - license = licenses.hpndUc; + maintainers = with lib.maintainers; [ bcdarwin ]; + platforms = lib.platforms.unix; + license = lib.licenses.hpndUc; }; } |