diff options
Diffstat (limited to 'pkgs/applications/science/biology/inormalize')
-rw-r--r-- | pkgs/applications/science/biology/inormalize/default.nix | 11 |
1 files changed, 8 insertions, 3 deletions
diff --git a/pkgs/applications/science/biology/inormalize/default.nix b/pkgs/applications/science/biology/inormalize/default.nix index b4999193e177e..bf24f0ce19bf9 100644 --- a/pkgs/applications/science/biology/inormalize/default.nix +++ b/pkgs/applications/science/biology/inormalize/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchFromGitHub, cmake, makeWrapper, perlPackages, - libminc, EBTKS }: + libminc, ebtks }: stdenv.mkDerivation rec { pname = "inormalize"; @@ -15,11 +15,16 @@ stdenv.mkDerivation rec { patches = [ ./lgmask-interp.patch ./nu_correct_norm-interp.patch ]; + postPatch = '' + substituteInPlace inormalize.cc \ + --replace "clamp" "::clamp" + ''; + nativeBuildInputs = [ cmake makeWrapper ]; - buildInputs = [ libminc EBTKS ]; + buildInputs = [ libminc ebtks ]; propagatedBuildInputs = with perlPackages; [ perl GetoptTabular MNI-Perllib ]; - cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/cmake" "-DEBTKS_DIR=${EBTKS}/lib/" ]; + cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/cmake" "-DEBTKS_DIR=${ebtks}/lib/" ]; postFixup = '' for p in $out/bin/*; do |