diff options
Diffstat (limited to 'pkgs/applications/science/math/mathematica/default.nix')
| -rw-r--r-- | pkgs/applications/science/math/mathematica/default.nix | 213 |
1 files changed, 109 insertions, 104 deletions
diff --git a/pkgs/applications/science/math/mathematica/default.nix b/pkgs/applications/science/math/mathematica/default.nix index af88263889773..d24cff9e86cee 100644 --- a/pkgs/applications/science/math/mathematica/default.nix +++ b/pkgs/applications/science/math/mathematica/default.nix @@ -1,167 +1,172 @@ -{ lib, stdenv -, coreutils -, patchelf -, requireFile -, callPackage +{ lib +, stdenv +, autoPatchelfHook +, buildEnv , makeWrapper +, requireFile , alsa-lib +, cups , dbus +, flite , fontconfig , freetype -, gcc +, gcc-unwrapped , glib -, libssh2 +, gmpxx +, keyutils +, libGL +, libGLU +, libpcap +, libtins +, libuuid +, libxkbcommon +, libxml2 +, llvmPackages_12 +, matio +, mpfr , ncurses , opencv4 +, openjdk11 , openssl +, pciutils +, tre , unixODBC , xkeyboard_config , xorg , zlib -, libxml2 -, libuuid , lang ? "en" -, libGL -, libGLU }: let - l10n = - import ./l10ns.nix { - lib = lib; - inherit requireFile lang; - }; -in -stdenv.mkDerivation rec { + l10n = import ./l10ns.nix { + inherit lib requireFile lang; + }; +in stdenv.mkDerivation { inherit (l10n) version name src; - buildInputs = [ - coreutils - patchelf + nativeBuildInputs = [ + autoPatchelfHook makeWrapper + ]; + + buildInputs = [ alsa-lib - coreutils + cups.lib dbus + flite fontconfig freetype - gcc.cc - gcc.libc glib - libssh2 + gmpxx + keyutils.lib + libGL + libGLU + libpcap + libtins + libuuid + libxkbcommon + libxml2 + llvmPackages_12.libllvm.lib + matio + mpfr ncurses opencv4 + openjdk11 openssl - stdenv.cc.cc.lib + pciutils + tre unixODBC xkeyboard_config - libxml2 - libuuid - zlib - libGL - libGLU ] ++ (with xorg; [ + libICE + libSM libX11 + libXScrnSaver + libXcomposite + libXcursor + libXdamage libXext - libXtst + libXfixes libXi + libXinerama libXmu + libXrandr libXrender + libXtst libxcb - libXcursor - libXfixes - libXrandr - libICE - libSM ]); - ldpath = lib.makeLibraryPath buildInputs - + lib.optionalString (stdenv.hostPlatform.system == "x86_64-linux") - (":" + lib.makeSearchPathOutput "lib" "lib64" buildInputs); + wrapProgramFlags = [ + "--prefix LD_LIBRARY_PATH : ${lib.makeLibraryPath [ gcc-unwrapped.lib zlib ]}" + "--prefix PATH : ${lib.makeBinPath [ stdenv.cc ]}" + # Fix libQt errors - #96490 + "--set USE_WOLFRAM_LD_LIBRARY_PATH 1" + # Fix xkeyboard config path for Qt + "--set QT_XKB_CONFIG_ROOT ${xkeyboard_config}/share/X11/xkb" + ]; unpackPhase = '' - echo "=== Extracting makeself archive ===" - # find offset from file + runHook preUnpack + + # Find offset from file offset=$(${stdenv.shell} -c "$(grep -axm1 -e 'offset=.*' $src); echo \$offset" $src) - dd if="$src" ibs=$offset skip=1 | tar -xf - - cd Unix + tail -c +$(($offset + 1)) $src | tar -xf - + + runHook postUnpack ''; installPhase = '' - cd Installer - # don't restrict PATH, that has already been done - sed -i -e 's/^PATH=/# PATH=/' MathInstaller - - # Fix the installation script as follows: - # 1. Adjust the shebang - # 2. Use the wrapper in the desktop items - substituteInPlace MathInstaller \ - --replace "/bin/bash" "/bin/sh" \ - --replace "Executables/Mathematica" "../../bin/mathematica" - - # Install the desktop items - export XDG_DATA_HOME="$out/share" + runHook preInstall - echo "=== Running MathInstaller ===" - ./MathInstaller -auto -createdir=y -execdir=$out/bin -targetdir=$out/libexec/Mathematica -silent + cd "$TMPDIR/Unix/Installer" - # Fix library paths - cd $out/libexec/Mathematica/Executables - for path in mathematica MathKernel Mathematica WolframKernel wolfram math; do - sed -i -e "2iexport LD_LIBRARY_PATH=${zlib}/lib:${stdenv.cc.cc.lib}/lib:${libssh2}/lib:\''${LD_LIBRARY_PATH}\n" $path - done + mkdir -p "$out/lib/udev/rules.d" - # Fix xkeyboard config path for Qt - for path in mathematica Mathematica; do - sed -i -e "2iexport QT_XKB_CONFIG_ROOT=\"${xkeyboard_config}/share/X11/xkb\"\n" $path - done - - # Remove some broken libraries - rm -f $out/libexec/Mathematica/SystemFiles/Libraries/Linux-x86-64/libz.so* - - # Set environment variable to fix libQt errors - see https://github.com/NixOS/nixpkgs/issues/96490 - wrapProgram $out/bin/mathematica --set USE_WOLFRAM_LD_LIBRARY_PATH 1 + # Patch MathInstaller's shebangs and udev rules dir + patchShebangs MathInstaller + substituteInPlace MathInstaller \ + --replace /etc/udev/rules.d $out/lib/udev/rules.d + + # Remove PATH restriction, root and avahi daemon checks, and hostname call + sed -i ' + s/^PATH=/# &/ + s/isRoot="false"/# &/ + s/^checkAvahiDaemon$/# &/ + s/`hostname`/""/ + ' MathInstaller + + # NOTE: some files placed under HOME may be useful + XDG_DATA_HOME="$out/share" HOME="$TMPDIR/home" vernierLink=y \ + ./MathInstaller -execdir="$out/bin" -targetdir="$out/libexec/Mathematica" -auto -verbose -createdir=y + + # Check if MathInstaller produced any errors + errLog="$out/libexec/Mathematica/InstallErrors" + if [ -f "$errLog" ]; then + echo "Installation errors:" + cat "$errLog" + return 1 + fi + + runHook postInstall ''; preFixup = '' - echo "=== PatchElfing away ===" - # This code should be a bit forgiving of errors, unfortunately - set +e - find $out/libexec/Mathematica/SystemFiles -type f -perm -0100 | while read f; do - type=$(readelf -h "$f" 2>/dev/null | grep 'Type:' | sed -e 's/ *Type: *\([A-Z]*\) (.*/\1/') - if [ -z "$type" ]; then - : - elif [ "$type" == "EXEC" ]; then - echo "patching $f executable <<" - patchelf --shrink-rpath "$f" - patchelf \ - --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" \ - --set-rpath "$(patchelf --print-rpath "$f"):${ldpath}" \ - "$f" \ - && patchelf --shrink-rpath "$f" \ - || echo unable to patch ... ignoring 1>&2 - elif [ "$type" == "DYN" ]; then - echo "patching $f library <<" - patchelf \ - --set-rpath "$(patchelf --print-rpath "$f"):${ldpath}" \ - "$f" \ - && patchelf --shrink-rpath "$f" \ - || echo unable to patch ... ignoring 1>&2 - else - echo "not patching $f <<: unknown elf type" - fi + for bin in $out/libexec/Mathematica/Executables/*; do + wrapProgram "$bin" ''${wrapProgramFlags[@]} done ''; + dontConfigure = true; dontBuild = true; - # This is primarily an IO bound build; there's little benefit to building remotely. + # This is primarily an IO bound build; there's little benefit to building remotely preferLocalBuild = true; - # all binaries are already stripped + # All binaries are already stripped dontStrip = true; - # we did this in prefixup already - dontPatchELF = true; + # NOTE: Some deps are still not found; ignore for now + autoPatchelfIgnoreMissingDeps = true; meta = with lib; { description = "Wolfram Mathematica computational software system"; |