diff options
Diffstat (limited to 'pkgs/applications/science')
7 files changed, 9 insertions, 10 deletions
diff --git a/pkgs/applications/science/biology/eggnog-mapper/default.nix b/pkgs/applications/science/biology/eggnog-mapper/default.nix index c555a30b15a8d..05c445b6cd08d 100644 --- a/pkgs/applications/science/biology/eggnog-mapper/default.nix +++ b/pkgs/applications/science/biology/eggnog-mapper/default.nix @@ -36,7 +36,7 @@ python3Packages.buildPythonApplication rec { ] ++ (with python3Packages; [ biopython psutil - XlsxWriter + xlsxwriter ]); # Tests rely on some of the databases being available, which is not bundled diff --git a/pkgs/applications/science/biology/muscle/default.nix b/pkgs/applications/science/biology/muscle/default.nix index 99d13d1ab8953..86219f35f95a3 100644 --- a/pkgs/applications/science/biology/muscle/default.nix +++ b/pkgs/applications/science/biology/muscle/default.nix @@ -1,13 +1,13 @@ { lib, stdenv, fetchFromGitHub }: stdenv.mkDerivation rec { - name = "muscle"; + pname = "muscle"; version = "5.1.0"; src = fetchFromGitHub { owner = "rcedgar"; - repo = "${name}"; + repo = pname; rev = "${version}"; hash = "sha256-NpnJziZXga/T5OavUt3nQ5np8kJ9CFcSmwyg4m6IJsk="; }; diff --git a/pkgs/applications/science/biology/veryfasttree/default.nix b/pkgs/applications/science/biology/veryfasttree/default.nix index d5d4c6231e699..f85f93055289d 100644 --- a/pkgs/applications/science/biology/veryfasttree/default.nix +++ b/pkgs/applications/science/biology/veryfasttree/default.nix @@ -1,12 +1,12 @@ { lib, stdenv, fetchFromGitHub, cmake }: stdenv.mkDerivation rec { - name = "veryfasttree"; + pname = "veryfasttree"; version = "3.1.1"; src = fetchFromGitHub { owner = "citiususc"; - repo = "${name}"; + repo = pname; rev = "v${version}"; hash = "sha256-AOzbxUnrn1qgscjdOKf4dordnSKtIg3nSVaYWK1jbuc="; }; diff --git a/pkgs/applications/science/electronics/flatcam/default.nix b/pkgs/applications/science/electronics/flatcam/default.nix index 25efbd754b2a5..02b2d2d61ac02 100644 --- a/pkgs/applications/science/electronics/flatcam/default.nix +++ b/pkgs/applications/science/electronics/flatcam/default.nix @@ -46,7 +46,7 @@ in python.pkgs.buildPythonApplication rec { numpy packaging pyqt4 - Rtree + rtree scipy setuptools shapely diff --git a/pkgs/applications/science/engineering/strictdoc/default.nix b/pkgs/applications/science/engineering/strictdoc/default.nix index c81652c5ae7e6..aaf944fdd01e0 100644 --- a/pkgs/applications/science/engineering/strictdoc/default.nix +++ b/pkgs/applications/science/engineering/strictdoc/default.nix @@ -19,7 +19,7 @@ , setuptools , textx , xlrd -, XlsxWriter +, xlsxwriter , pytestCheckHook }: @@ -70,7 +70,7 @@ buildPythonApplication rec { setuptools textx xlrd - XlsxWriter + xlsxwriter ]; nativeCheckInputs = [ diff --git a/pkgs/applications/science/math/readstat/default.nix b/pkgs/applications/science/math/readstat/default.nix index e58674f344971..efbf80ba16ed2 100644 --- a/pkgs/applications/science/math/readstat/default.nix +++ b/pkgs/applications/science/math/readstat/default.nix @@ -1,7 +1,7 @@ { lib, stdenv, fetchFromGitHub, autoreconfHook, pkg-config, libiconv }: stdenv.mkDerivation rec { - name = "readstat"; + pname = "readstat"; version = "1.1.9"; src = fetchFromGitHub { diff --git a/pkgs/applications/science/misc/bada-bib/default.nix b/pkgs/applications/science/misc/bada-bib/default.nix index 76495f5cae150..7ad542402b58b 100644 --- a/pkgs/applications/science/misc/bada-bib/default.nix +++ b/pkgs/applications/science/misc/bada-bib/default.nix @@ -22,7 +22,6 @@ python3Packages.buildPythonApplication rec { pname = "bada-bib"; version = "0.8.0"; format = "other"; - strictDeps = false; # https://github.com/NixOS/nixpkgs/issues/56943 src = fetchFromGitHub { owner = "RogerCrocker"; |