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-rw-r--r--pkgs/development/python-modules/rpy2/2.nix108
1 files changed, 0 insertions, 108 deletions
diff --git a/pkgs/development/python-modules/rpy2/2.nix b/pkgs/development/python-modules/rpy2/2.nix
deleted file mode 100644
index 3108861e9ce22..0000000000000
--- a/pkgs/development/python-modules/rpy2/2.nix
+++ /dev/null
@@ -1,108 +0,0 @@
-{ lib
-, python
-, buildPythonPackage
-, fetchPypi
-, isPyPy
-, isPy27
-, readline
-, R
-, rWrapper
-, rPackages
-, pcre
-, xz
-, bzip2
-, zlib
-, icu
-, singledispatch
-, six
-, jinja2
-, pytz
-, numpy
-, pytest
-, mock
-, extraRPackages ? []
-}:
-
-buildPythonPackage rec {
-    version = "2.8.6"; # python2 support dropped in 2.9.x
-    pname = "rpy2";
-    disabled = isPyPy;
-    src = fetchPypi {
-      inherit version pname;
-      sha256 = "162zki5c1apgv6qbafi7n66y4hgpgp43xag7q75qb6kv99ri6k80";
-    };
-    buildInputs = [
-      readline
-      R
-      pcre
-      xz
-      bzip2
-      zlib
-      icu
-    ] ++ (with rPackages; [
-      # packages expected by the test framework
-      ggplot2
-      dplyr
-      RSQLite
-      broom
-      DBI
-      dbplyr
-      hexbin
-      lme4
-      tidyr
-
-      # is in upstream's `requires` although it shouldn't be -- this is easier than patching it away
-      pytest
-    ]) ++ extraRPackages ++ rWrapper.recommendedPackages;
-
-    nativeBuildInputs = [
-      R # needed at setup time to detect R_HOME (alternatively set R_HOME explicitly)
-    ];
-
-    patches = [
-      # R_LIBS_SITE is used by the nix r package to point to the installed R libraries.
-      # This patch sets R_LIBS_SITE when rpy2 is imported.
-      ./r-libs-site.patch
-    ];
-    postPatch = ''
-      substituteInPlace ${ if isPy27 then "rpy/rinterface/__init__.py" else "rpy2/rinterface_lib/embedded.py" } --replace '@NIX_R_LIBS_SITE@' "$R_LIBS_SITE"
-    '';
-
-    doPatchelf = false; # fails because of "missing filename"
-    patchelfPhase = "";
-
-    propagatedBuildInputs = [
-      singledispatch
-      six
-      jinja2
-      pytz
-      numpy
-    ];
-
-    checkInputs = [
-      pytest
-      mock
-    ];
-    # One remaining test failure caused by different unicode encoding.
-    # https://bitbucket.org/rpy2/rpy2/issues/488
-    doCheck = false;
-    checkPhase = ''
-      ${python.interpreter} -m 'rpy2'
-    '';
-
-    # For some reason libreadline.so is not found. Curiously `ldd _rinterface.so | grep readline` shows two readline entries:
-    # libreadline.so.6 => not found
-    # libreadline.so.6 => /nix/store/z2zhmrg6jcrn5iq2779mav0nnq4vm2q6-readline-6.3p08/lib/libreadline.so.6 (0x00007f333ac43000)
-    # There must be a better way to fix this, but I don't know it.
-    postFixup = ''
-      patchelf --add-needed ${readline}/lib/libreadline.so "$out/${python.sitePackages}/rpy2/rinterface/"_rinterface*.so
-    '';
-
-    meta = {
-      homepage = "http://rpy.sourceforge.net/rpy2";
-      description = "Python interface to R";
-      license = lib.licenses.gpl2Plus;
-      platforms = lib.platforms.unix;
-      maintainers = with lib.maintainers; [ joelmo ];
-    };
-  }