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-rw-r--r--pkgs/development/compilers/gnu-cim/default.nix2
-rw-r--r--pkgs/development/compilers/llvm/common/mlir/default.nix11
-rw-r--r--pkgs/development/compilers/rust/rustc.nix2
-rw-r--r--pkgs/development/compilers/sbcl/default.nix6
-rw-r--r--pkgs/development/compilers/shaderc/default.nix18
-rw-r--r--pkgs/development/compilers/vala/default.nix2
-rw-r--r--pkgs/development/interpreters/ngn-k/default.nix2
-rw-r--r--pkgs/development/libraries/dconf/default.nix2
-rw-r--r--pkgs/development/libraries/duckdb/default.nix1
-rw-r--r--pkgs/development/libraries/duckdb/versions.json6
-rw-r--r--pkgs/development/libraries/folks/default.nix2
-rw-r--r--pkgs/development/libraries/gcr/4.nix4
-rw-r--r--pkgs/development/libraries/gcr/default.nix4
-rw-r--r--pkgs/development/libraries/gexiv2/default.nix2
-rw-r--r--pkgs/development/libraries/gfbgraph/default.nix2
-rw-r--r--pkgs/development/libraries/glib/default.nix10
-rw-r--r--pkgs/development/libraries/gnome-online-accounts/default.nix2
-rw-r--r--pkgs/development/libraries/gnome-video-effects/default.nix2
-rw-r--r--pkgs/development/libraries/gom/default.nix2
-rw-r--r--pkgs/development/libraries/goocanvas/2.x.nix2
-rw-r--r--pkgs/development/libraries/goocanvas/3.x.nix2
-rw-r--r--pkgs/development/libraries/goocanvas/default.nix2
-rw-r--r--pkgs/development/libraries/goocanvasmm/default.nix2
-rw-r--r--pkgs/development/libraries/grilo-plugins/default.nix2
-rw-r--r--pkgs/development/libraries/grilo/default.nix2
-rw-r--r--pkgs/development/libraries/gsound/default.nix2
-rw-r--r--pkgs/development/libraries/gspell/default.nix2
-rw-r--r--pkgs/development/libraries/gstreamer/good/default.nix4
-rw-r--r--pkgs/development/libraries/gtk-mac-integration/default.nix2
-rw-r--r--pkgs/development/libraries/gtkimageview/default.nix2
-rw-r--r--pkgs/development/libraries/gtksourceview/3.x.nix2
-rw-r--r--pkgs/development/libraries/gtksourceview/4.x.nix2
-rw-r--r--pkgs/development/libraries/gtksourceview/5.x.nix2
-rw-r--r--pkgs/development/libraries/gupnp-dlna/default.nix2
-rw-r--r--pkgs/development/libraries/hyena/default.nix2
-rw-r--r--pkgs/development/libraries/intel-gmmlib/default.nix4
-rw-r--r--pkgs/development/libraries/json-glib/default.nix2
-rw-r--r--pkgs/development/libraries/lasem/default.nix2
-rw-r--r--pkgs/development/libraries/libbluray/default.nix11
-rw-r--r--pkgs/development/libraries/libchamplain/default.nix2
-rw-r--r--pkgs/development/libraries/libdazzle/default.nix2
-rw-r--r--pkgs/development/libraries/libepc/default.nix2
-rw-r--r--pkgs/development/libraries/libgdata/default.nix2
-rw-r--r--pkgs/development/libraries/libgee/default.nix2
-rw-r--r--pkgs/development/libraries/libgit2-glib/default.nix2
-rw-r--r--pkgs/development/libraries/libgnome-games-support/2.0.nix2
-rw-r--r--pkgs/development/libraries/libgnome-games-support/default.nix2
-rw-r--r--pkgs/development/libraries/libgnome-keyring/default.nix2
-rw-r--r--pkgs/development/libraries/libgrss/default.nix2
-rw-r--r--pkgs/development/libraries/libgudev/default.nix2
-rw-r--r--pkgs/development/libraries/libgweather/default.nix2
-rw-r--r--pkgs/development/libraries/libgxps/default.nix2
-rw-r--r--pkgs/development/libraries/libks/default.nix4
-rw-r--r--pkgs/development/libraries/libpeas/2.x.nix2
-rw-r--r--pkgs/development/libraries/libpeas/default.nix2
-rw-r--r--pkgs/development/libraries/librealsense/default.nix2
-rw-r--r--pkgs/development/libraries/librest/1.0.nix2
-rw-r--r--pkgs/development/libraries/librest/default.nix2
-rw-r--r--pkgs/development/libraries/librsvg/default.nix2
-rw-r--r--pkgs/development/libraries/libsecret/default.nix2
-rw-r--r--pkgs/development/libraries/libsoup/3.x.nix2
-rw-r--r--pkgs/development/libraries/libsoup/default.nix2
-rw-r--r--pkgs/development/libraries/libunique/3.x.nix2
-rw-r--r--pkgs/development/libraries/libunique/default.nix2
-rw-r--r--pkgs/development/libraries/libunwind/default.nix2
-rw-r--r--pkgs/development/libraries/libvirt/default.nix11
-rw-r--r--pkgs/development/libraries/libzapojit/default.nix2
-rw-r--r--pkgs/development/libraries/mlt/default.nix4
-rw-r--r--pkgs/development/libraries/openssl/default.nix23
-rw-r--r--pkgs/development/libraries/python-qt/default.nix4
-rw-r--r--pkgs/development/libraries/totem-pl-parser/default.nix2
-rw-r--r--pkgs/development/libraries/tracker-miners/default.nix2
-rw-r--r--pkgs/development/libraries/tracker/default.nix2
-rw-r--r--pkgs/development/libraries/waylib/default.nix9
-rw-r--r--pkgs/development/libraries/wlroots/default.nix4
-rw-r--r--pkgs/development/libraries/wxwidgets/wxGTK32.nix2
-rw-r--r--pkgs/development/misc/yelp-tools/default.nix2
-rw-r--r--pkgs/development/ocaml-modules/cstruct/ppx.nix4
-rw-r--r--pkgs/development/python-modules/aiortm/default.nix4
-rw-r--r--pkgs/development/python-modules/amaranth-boards/default.nix6
-rw-r--r--pkgs/development/python-modules/amaranth-soc/default.nix2
-rw-r--r--pkgs/development/python-modules/amaranth/default.nix2
-rw-r--r--pkgs/development/python-modules/anthropic/default.nix59
-rw-r--r--pkgs/development/python-modules/birch/default.nix6
-rw-r--r--pkgs/development/python-modules/boto3-stubs/default.nix4
-rw-r--r--pkgs/development/python-modules/cachier/default.nix4
-rw-r--r--pkgs/development/python-modules/desktop-notifier/default.nix4
-rw-r--r--pkgs/development/python-modules/domeneshop/default.nix9
-rw-r--r--pkgs/development/python-modules/duckdb-engine/default.nix25
-rw-r--r--pkgs/development/python-modules/duckdb-engine/remote_data.patch24
-rw-r--r--pkgs/development/python-modules/duckdb/default.nix4
-rw-r--r--pkgs/development/python-modules/ffmpy/default.nix2
-rw-r--r--pkgs/development/python-modules/flake8-bugbear/default.nix4
-rw-r--r--pkgs/development/python-modules/frozendict/default.nix7
-rw-r--r--pkgs/development/python-modules/gekko/default.nix2
-rw-r--r--pkgs/development/python-modules/geopandas/default.nix16
-rw-r--r--pkgs/development/python-modules/govee-local-api/default.nix27
-rw-r--r--pkgs/development/python-modules/gradio-pdf/default.nix2
-rw-r--r--pkgs/development/python-modules/gradio/client.nix2
-rw-r--r--pkgs/development/python-modules/gradio/default.nix2
-rw-r--r--pkgs/development/python-modules/hdf5plugin/default.nix2
-rw-r--r--pkgs/development/python-modules/instructor/default.nix71
-rw-r--r--pkgs/development/python-modules/langchain-community/default.nix4
-rw-r--r--pkgs/development/python-modules/langchain-core/default.nix4
-rw-r--r--pkgs/development/python-modules/langchain/default.nix2
-rw-r--r--pkgs/development/python-modules/langsmith/default.nix9
-rw-r--r--pkgs/development/python-modules/maestral/default.nix23
-rw-r--r--pkgs/development/python-modules/manim/default.nix175
-rw-r--r--pkgs/development/python-modules/manim/failing_tests.nix92
-rw-r--r--pkgs/development/python-modules/manim/pytest-report-header.patch22
-rw-r--r--pkgs/development/python-modules/mashumaro/default.nix4
-rw-r--r--pkgs/development/python-modules/mkdocstrings/default.nix4
-rw-r--r--pkgs/development/python-modules/numba-scipy/default.nix4
-rw-r--r--pkgs/development/python-modules/pdoc/default.nix2
-rw-r--r--pkgs/development/python-modules/pipdeptree/default.nix43
-rw-r--r--pkgs/development/python-modules/pydrawise/default.nix4
-rw-r--r--pkgs/development/python-modules/pygame-ce/default.nix123
-rw-r--r--pkgs/development/python-modules/pygame-ce/fix-dependency-finding.patch41
-rw-r--r--pkgs/development/python-modules/pygame-ce/skip-surface-tests.patch26
-rw-r--r--pkgs/development/python-modules/pymc/default.nix4
-rw-r--r--pkgs/development/python-modules/pymongo-inmemory/default.nix6
-rw-r--r--pkgs/development/python-modules/pyrender/default.nix11
-rw-r--r--pkgs/development/python-modules/pytensor/default.nix1
-rw-r--r--pkgs/development/python-modules/pytikz-allefeld/default.nix9
-rw-r--r--pkgs/development/python-modules/pyunpack/default.nix4
-rw-r--r--pkgs/development/python-modules/pyvis/default.nix9
-rw-r--r--pkgs/development/python-modules/remi/default.nix15
-rw-r--r--pkgs/development/python-modules/rubicon-objc/default.nix62
-rw-r--r--pkgs/development/python-modules/snaptime/default.nix9
-rw-r--r--pkgs/development/python-modules/sqlglot/default.nix4
-rw-r--r--pkgs/development/python-modules/sqlmodel/default.nix35
-rw-r--r--pkgs/development/python-modules/strct/default.nix4
-rw-r--r--pkgs/development/python-modules/total-connect-client/default.nix10
-rw-r--r--pkgs/development/python-modules/trimesh/default.nix6
-rw-r--r--pkgs/development/python-modules/uncompyle6/default.nix14
-rw-r--r--pkgs/development/python-modules/watchdog-gevent/default.nix39
-rw-r--r--pkgs/development/python-modules/whenever/default.nix4
-rw-r--r--pkgs/development/python-modules/xdis/default.nix26
-rw-r--r--pkgs/development/tools/bbin/default.nix4
-rw-r--r--pkgs/development/tools/biodiff/default.nix15
-rw-r--r--pkgs/development/tools/continuous-integration/drone/default.nix4
-rw-r--r--pkgs/development/tools/continuous-integration/github-runner/default.nix4
-rw-r--r--pkgs/development/tools/continuous-integration/gitlab-runner/default.nix6
-rw-r--r--pkgs/development/tools/devbox/default.nix6
-rw-r--r--pkgs/development/tools/glade/default.nix2
-rw-r--r--pkgs/development/tools/gnome-desktop-testing/default.nix2
-rw-r--r--pkgs/development/tools/go-migrate/default.nix2
-rw-r--r--pkgs/development/tools/gotestsum/default.nix17
-rw-r--r--pkgs/development/tools/gtk-mac-bundler/default.nix2
-rw-r--r--pkgs/development/tools/language-servers/neocmakelsp/default.nix6
-rw-r--r--pkgs/development/tools/language-servers/nil/default.nix2
-rw-r--r--pkgs/development/tools/misc/astyle/default.nix4
-rw-r--r--pkgs/development/tools/misc/msitools/default.nix2
-rw-r--r--pkgs/development/tools/nemiver/default.nix8
-rw-r--r--pkgs/development/tools/pip-audit/default.nix46
-rw-r--r--pkgs/development/tools/profiling/sysprof/default.nix2
-rw-r--r--pkgs/development/tools/rust/cargo-nextest/default.nix6
-rw-r--r--pkgs/development/tools/txtpbfmt/default.nix8
-rw-r--r--pkgs/development/web/flyctl/default.nix12
159 files changed, 1136 insertions, 428 deletions
diff --git a/pkgs/development/compilers/gnu-cim/default.nix b/pkgs/development/compilers/gnu-cim/default.nix
index b1cb9f08597e0..54ba6cffff130 100644
--- a/pkgs/development/compilers/gnu-cim/default.nix
+++ b/pkgs/development/compilers/gnu-cim/default.nix
@@ -17,7 +17,7 @@ stdenv.mkDerivation rec {
   postPatch = ''
     for fname in lib/{simulation,simset}.c; do
       substituteInPlace "$fname" \
-        --replace \
+        --replace-fail \
           '#include "../../lib/cim.h"' \
           '#include "../lib/cim.h"'
     done
diff --git a/pkgs/development/compilers/llvm/common/mlir/default.nix b/pkgs/development/compilers/llvm/common/mlir/default.nix
index 7a79ac30ba864..044e5c673108b 100644
--- a/pkgs/development/compilers/llvm/common/mlir/default.nix
+++ b/pkgs/development/compilers/llvm/common/mlir/default.nix
@@ -1,6 +1,9 @@
-{ lib, stdenv, llvm_meta
+{ lib
+, stdenv
+, llvm_meta
 , buildLlvmTools
-, monorepoSrc, runCommand
+, monorepoSrc
+, runCommand
 , cmake
 , ninja
 , libxml2
@@ -14,7 +17,7 @@ stdenv.mkDerivation rec {
   inherit version doCheck;
 
   # Blank llvm dir just so relative path works
-  src = runCommand "${pname}-src-${version}" {} ''
+  src = runCommand "${pname}-src-${version}" { } ''
     mkdir -p "$out"
     cp -r ${monorepoSrc}/cmake "$out"
     cp -r ${monorepoSrc}/mlir "$out"
@@ -45,7 +48,7 @@ stdenv.mkDerivation rec {
     "-DLLVM_INSTALL_TOOLCHAIN_ONLY=OFF"
     "-DMLIR_TOOLS_INSTALL_DIR=${placeholder "out"}/bin/"
     "-DLLVM_ENABLE_IDE=OFF"
-    "-DLLD_INSTALL_PACKAGE_DIR=${placeholder "out"}/lib/cmake/mlir"
+    "-DMLIR_INSTALL_PACKAGE_DIR=${placeholder "out"}/lib/cmake/mlir"
     "-DLLVM_BUILD_TESTS=${if doCheck then "ON" else "OFF"}"
     "-DLLVM_ENABLE_FFI=ON"
     "-DLLVM_HOST_TRIPLE=${stdenv.hostPlatform.config}"
diff --git a/pkgs/development/compilers/rust/rustc.nix b/pkgs/development/compilers/rust/rustc.nix
index ee4ee37dfc98b..4c02692b75bd5 100644
--- a/pkgs/development/compilers/rust/rustc.nix
+++ b/pkgs/development/compilers/rust/rustc.nix
@@ -274,7 +274,7 @@ in stdenv.mkDerivation (finalAttrs: {
       # Platforms with host tools from
       # https://doc.rust-lang.org/nightly/rustc/platform-support.html
       "x86_64-darwin" "i686-darwin" "aarch64-darwin"
-      "i686-freebsd13" "x86_64-freebsd13"
+      "i686-freebsd" "x86_64-freebsd"
       "x86_64-solaris"
       "aarch64-linux" "armv6l-linux" "armv7l-linux" "i686-linux"
       "loongarch64-linux" "powerpc64-linux" "powerpc64le-linux"
diff --git a/pkgs/development/compilers/sbcl/default.nix b/pkgs/development/compilers/sbcl/default.nix
index 2ba79281567ba..4116952199719 100644
--- a/pkgs/development/compilers/sbcl/default.nix
+++ b/pkgs/development/compilers/sbcl/default.nix
@@ -19,12 +19,12 @@
 
 let
   versionMap = {
-    "2.4.2" = {
-      sha256 = "sha256-/APLUtEqr+h1nmMoRQogG73fibFwcaToPznoC0Pd7w8=";
-    };
     "2.4.3" = {
       sha256 = "sha256-icmq35K4KtPHSj1PFYoDiJPeoOTzlNyvyWNYPDC3w/I=";
     };
+    "2.4.4" = {
+      sha256 = "sha256-ipMmJ7Px2OlhjxzcIl7csAJFaARpfiyH0UBoN2ShBtU=";
+    };
   };
   # Collection of pre-built SBCL binaries for platforms that need them for
   # bootstrapping. Ideally these are to be avoided.  If ECL (or any other
diff --git a/pkgs/development/compilers/shaderc/default.nix b/pkgs/development/compilers/shaderc/default.nix
index 8982382247939..bb8030406aebb 100644
--- a/pkgs/development/compilers/shaderc/default.nix
+++ b/pkgs/development/compilers/shaderc/default.nix
@@ -8,25 +8,25 @@ let
   glslang = fetchFromGitHub {
     owner = "KhronosGroup";
     repo = "glslang";
-    rev = "a91631b260cba3f22858d6c6827511e636c2458a";
-    hash = "sha256-7kIIU45pe+IF7lGltpIKSvQBmcXR+TWFvmx7ztMNrpc=";
+    rev = "6be56e45e574b375d759b89dad35f780bbd4792f";
+    hash = "sha256-tktdsj4sxwQHBavHzu1x8H28RrIqSQs/fp2TQcVCm2g=";
   };
   spirv-tools = fetchFromGitHub {
     owner = "KhronosGroup";
     repo = "SPIRV-Tools";
-    rev = "f0cc85efdbbe3a46eae90e0f915dc1509836d0fc";
-    hash = "sha256-RzGvoDt1Qc+f6mZsfs99MxX4YB3yFc5FP92Yx/WGrsI=";
+    rev = "360d469b9eac54d6c6e20f609f9ec35e3a5380ad";
+    hash = "sha256-Bned5Pa6zCFByfNvqD0M5t3l4uAJYkDlpe6wu8e7a3U=";
   };
   spirv-headers = fetchFromGitHub {
     owner = "KhronosGroup";
     repo = "SPIRV-Headers";
-    rev = "1c6bb2743599e6eb6f37b2969acc0aef812e32e3";
-    hash = "sha256-/I9dJlBE0kvFvqooKuqMETtOE72Jmva3zIGnq0o4+aE=";
+    rev = "4183b260f4cccae52a89efdfcdd43c4897989f42";
+    hash = "sha256-RKjw3H1z02bl6730xsbo38yjMaOCsHZP9xJOQbmWpnw=";
   };
 in
 stdenv.mkDerivation rec {
   pname = "shaderc";
-  version = "2023.8";
+  version = "2024.0";
 
   outputs = [ "out" "lib" "bin" "dev" "static" ];
 
@@ -34,10 +34,10 @@ stdenv.mkDerivation rec {
     owner = "google";
     repo = "shaderc";
     rev = "v${version}";
-    hash = "sha256-c8mJ361DY2VlSFZ4/RCrV+nqB9HblbOdfMkI4cM1QzM=";
+    hash = "sha256-Cwp7WbaKWw/wL9m70wfYu47xoUGQW+QGeoYhbyyzstQ=";
   };
 
-  patchPhase = ''
+  postPatch = ''
     cp -r --no-preserve=mode ${glslang} third_party/glslang
     cp -r --no-preserve=mode ${spirv-tools} third_party/spirv-tools
     ln -s ${spirv-headers} third_party/spirv-tools/external/spirv-headers
diff --git a/pkgs/development/compilers/vala/default.nix b/pkgs/development/compilers/vala/default.nix
index b2bbbdd7bf3cb..86caf243a559c 100644
--- a/pkgs/development/compilers/vala/default.nix
+++ b/pkgs/development/compilers/vala/default.nix
@@ -77,7 +77,7 @@ let
 
     meta = with lib; {
       description = "Compiler for GObject type system";
-      homepage = "https://wiki.gnome.org/Projects/Vala";
+      homepage = "https://vala.dev";
       license = licenses.lgpl21Plus;
       platforms = platforms.unix;
       maintainers = with maintainers; [ antono jtojnar ] ++ teams.pantheon.members;
diff --git a/pkgs/development/interpreters/ngn-k/default.nix b/pkgs/development/interpreters/ngn-k/default.nix
index 0a24bbdfe0f79..9ec1f0b673d3d 100644
--- a/pkgs/development/interpreters/ngn-k/default.nix
+++ b/pkgs/development/interpreters/ngn-k/default.nix
@@ -65,6 +65,6 @@ useStdenv.mkDerivation {
     homepage = "https://codeberg.org/ngn/k";
     license = lib.licenses.agpl3Only;
     maintainers = [ lib.maintainers.sternenseemann ];
-    platforms = [ "x86_64-linux" "x86_64-freebsd13" ];
+    platforms = [ "x86_64-linux" "x86_64-freebsd" ];
   };
 }
diff --git a/pkgs/development/libraries/dconf/default.nix b/pkgs/development/libraries/dconf/default.nix
index 2f8ea0e685e8c..ab3804dfcf3ba 100644
--- a/pkgs/development/libraries/dconf/default.nix
+++ b/pkgs/development/libraries/dconf/default.nix
@@ -76,7 +76,7 @@ stdenv.mkDerivation rec {
   };
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Projects/dconf";
+    homepage = "https://gitlab.gnome.org/GNOME/dconf";
     license = licenses.lgpl21Plus;
     platforms = platforms.unix;
     maintainers = teams.gnome.members;
diff --git a/pkgs/development/libraries/duckdb/default.nix b/pkgs/development/libraries/duckdb/default.nix
index 03857e962a832..343574f251a8b 100644
--- a/pkgs/development/libraries/duckdb/default.nix
+++ b/pkgs/development/libraries/duckdb/default.nix
@@ -98,6 +98,7 @@ stdenv.mkDerivation (finalAttrs: {
         # fails with Out of Memory Error
         "test/sql/copy/parquet/batched_write/batch_memory_usage.test"
         # wants http connection
+        "test/sql/copy/csv/recursive_query_csv.test"
         "test/sql/copy/csv/test_mixed_lines.test"
       ] ++ lib.optionals stdenv.isAarch64 [
         "test/sql/aggregate/aggregates/test_kurtosis.test"
diff --git a/pkgs/development/libraries/duckdb/versions.json b/pkgs/development/libraries/duckdb/versions.json
index efb151413e3d9..de679be88599a 100644
--- a/pkgs/development/libraries/duckdb/versions.json
+++ b/pkgs/development/libraries/duckdb/versions.json
@@ -1,5 +1,5 @@
 {
-  "version": "0.10.1",
-  "rev": "4a89d97db8a5a23a15f3025c8d2d2885337c2637",
-  "hash": "sha256-/j/DaUzsfACI5Izr4lblkYmIEmKsOXr760UTwC0l/qg="
+  "version": "0.10.2",
+  "rev": "1601d94f94a7e0d2eb805a94803eb1e3afbbe4ed",
+  "hash": "sha256-CTZ90KJvLPQqu1FYciEWsxJbvybCjeBsi/12bkfVd9Q="
 }
diff --git a/pkgs/development/libraries/folks/default.nix b/pkgs/development/libraries/folks/default.nix
index c100a8862d5cc..8df1c9585450a 100644
--- a/pkgs/development/libraries/folks/default.nix
+++ b/pkgs/development/libraries/folks/default.nix
@@ -110,7 +110,7 @@ stdenv.mkDerivation (finalAttrs: {
 
   meta = with lib; {
     description = "A library that aggregates people from multiple sources to create metacontacts";
-    homepage = "https://wiki.gnome.org/Projects/Folks";
+    homepage = "https://gitlab.gnome.org/GNOME/folks";
     license = licenses.lgpl21Plus;
     maintainers = teams.gnome.members;
     platforms = platforms.unix;
diff --git a/pkgs/development/libraries/gcr/4.nix b/pkgs/development/libraries/gcr/4.nix
index 243663e430d53..ea1dbf99f2730 100644
--- a/pkgs/development/libraries/gcr/4.nix
+++ b/pkgs/development/libraries/gcr/4.nix
@@ -35,6 +35,8 @@ stdenv.mkDerivation rec {
     sha256 = "nOqtKShLqRm5IW4oiMGOxnJAwsk7OkhWvFSIu8Hzo4M=";
   };
 
+  strictDeps = true;
+
   nativeBuildInputs = [
     pkg-config
     meson
@@ -49,7 +51,6 @@ stdenv.mkDerivation rec {
   ];
 
   buildInputs = [
-    gnupg
     libgcrypt
     libtasn1
     pango
@@ -72,6 +73,7 @@ stdenv.mkDerivation rec {
     # We are still using ssh-agent from gnome-keyring.
     # https://github.com/NixOS/nixpkgs/issues/140824
     "-Dssh_agent=false"
+    "-Dgpg_path=${lib.getBin gnupg}/bin/gpg"
   ];
 
   doCheck = false; # fails 21 out of 603 tests, needs dbus daemon
diff --git a/pkgs/development/libraries/gcr/default.nix b/pkgs/development/libraries/gcr/default.nix
index 5a388246c154c..11d695e774994 100644
--- a/pkgs/development/libraries/gcr/default.nix
+++ b/pkgs/development/libraries/gcr/default.nix
@@ -35,6 +35,8 @@ stdenv.mkDerivation rec {
     sha256 = "utEPPFU6DhhUZJq1nFskNNoiyhpUrmE48fU5YVZ+Grc=";
   };
 
+  strictDeps = true;
+
   nativeBuildInputs = [
     pkg-config
     meson
@@ -46,7 +48,6 @@ stdenv.mkDerivation rec {
     wrapGAppsHook
     vala
     shared-mime-info
-    gnupg
     openssh
   ];
 
@@ -74,6 +75,7 @@ stdenv.mkDerivation rec {
     # We are still using ssh-agent from gnome-keyring.
     # https://github.com/NixOS/nixpkgs/issues/140824
     "-Dssh_agent=false"
+    "-Dgpg_path=${lib.getBin gnupg}/bin/gpg"
   ] ++ lib.optionals (!systemdSupport) [
     "-Dsystemd=disabled"
   ];
diff --git a/pkgs/development/libraries/gexiv2/default.nix b/pkgs/development/libraries/gexiv2/default.nix
index 4a346fdcffcd1..9753f78ec83ed 100644
--- a/pkgs/development/libraries/gexiv2/default.nix
+++ b/pkgs/development/libraries/gexiv2/default.nix
@@ -75,7 +75,7 @@ stdenv.mkDerivation rec {
   };
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Projects/gexiv2";
+    homepage = "https://gitlab.gnome.org/GNOME/gexiv2";
     description = "GObject wrapper around the Exiv2 photo metadata library";
     license = licenses.gpl2Plus;
     platforms = platforms.unix;
diff --git a/pkgs/development/libraries/gfbgraph/default.nix b/pkgs/development/libraries/gfbgraph/default.nix
index d84dd96ce2f4f..c3c41d971beb9 100644
--- a/pkgs/development/libraries/gfbgraph/default.nix
+++ b/pkgs/development/libraries/gfbgraph/default.nix
@@ -58,7 +58,7 @@ stdenv.mkDerivation rec {
   };
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Projects/GFBGraph";
+    homepage = "https://gitlab.gnome.org/GNOME/libgfbgraph";
     description = "GLib/GObject wrapper for the Facebook Graph API";
     maintainers = teams.gnome.members;
     license = licenses.lgpl21Plus;
diff --git a/pkgs/development/libraries/glib/default.nix b/pkgs/development/libraries/glib/default.nix
index 7c14141554fb4..cd03315c0b3c6 100644
--- a/pkgs/development/libraries/glib/default.nix
+++ b/pkgs/development/libraries/glib/default.nix
@@ -24,14 +24,6 @@
 
 assert stdenv.isLinux -> util-linuxMinimal != null;
 
-/*
-  * TODO:
-  * Use --enable-installed-tests for GNOME-related packages,
-      and use them as a separately installed tests run by Hydra
-      (they should test an already installed package)
-      https://wiki.gnome.org/Initiatives/GnomeGoals/InstalledTests
-  * Support org.freedesktop.Application, including D-Bus activation from desktop files
-*/
 let
   # Some packages don't get "Cflags" from pkg-config correctly
   # and then fail to build when directly including like <glib/...>.
@@ -282,7 +274,7 @@ stdenv.mkDerivation (finalAttrs: {
 
   meta = with lib; {
     description = "C library of programming buildings blocks";
-    homepage    = "https://wiki.gnome.org/Projects/GLib";
+    homepage    = "https://gitlab.gnome.org/GNOME/glib";
     license     = licenses.lgpl21Plus;
     maintainers = teams.gnome.members ++ (with maintainers; [ lovek323 raskin ]);
     pkgConfigModules = [
diff --git a/pkgs/development/libraries/gnome-online-accounts/default.nix b/pkgs/development/libraries/gnome-online-accounts/default.nix
index aee2056a85637..c06e45356ac8a 100644
--- a/pkgs/development/libraries/gnome-online-accounts/default.nix
+++ b/pkgs/development/libraries/gnome-online-accounts/default.nix
@@ -93,7 +93,7 @@ stdenv.mkDerivation (finalAttrs: {
   };
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Projects/GnomeOnlineAccounts";
+    homepage = "https://gitlab.gnome.org/GNOME/gnome-online-accounts";
     description = "Single sign-on framework for GNOME";
     platforms = platforms.unix;
     license = licenses.lgpl2Plus;
diff --git a/pkgs/development/libraries/gnome-video-effects/default.nix b/pkgs/development/libraries/gnome-video-effects/default.nix
index 0db1aa27e7789..fcf955fbc173c 100644
--- a/pkgs/development/libraries/gnome-video-effects/default.nix
+++ b/pkgs/development/libraries/gnome-video-effects/default.nix
@@ -32,7 +32,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "A collection of GStreamer effects to be used in different GNOME Modules";
-    homepage = "https://wiki.gnome.org/Projects/GnomeVideoEffects";
+    homepage = "https://gitlab.gnome.org/GNOME/gnome-video-effects";
     platforms = platforms.unix;
     maintainers = teams.gnome.members;
     license = licenses.gpl2;
diff --git a/pkgs/development/libraries/gom/default.nix b/pkgs/development/libraries/gom/default.nix
index 3cb7e9bd6fcba..4d48e0c227407 100644
--- a/pkgs/development/libraries/gom/default.nix
+++ b/pkgs/development/libraries/gom/default.nix
@@ -56,7 +56,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "A GObject to SQLite object mapper";
-    homepage = "https://wiki.gnome.org/Projects/Gom";
+    homepage = "https://gitlab.gnome.org/GNOME/gom";
     license = licenses.lgpl21Plus;
     platforms = platforms.unix;
     maintainers = teams.gnome.members;
diff --git a/pkgs/development/libraries/goocanvas/2.x.nix b/pkgs/development/libraries/goocanvas/2.x.nix
index 9067ef71ca051..46c7b188c9079 100644
--- a/pkgs/development/libraries/goocanvas/2.x.nix
+++ b/pkgs/development/libraries/goocanvas/2.x.nix
@@ -31,7 +31,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "Canvas widget for GTK based on the the Cairo 2D library";
-    homepage = "https://wiki.gnome.org/Projects/GooCanvas";
+    homepage = "https://gitlab.gnome.org/Archive/goocanvas";
     license = licenses.lgpl2;
     maintainers = with maintainers; [ ];
     platforms = platforms.unix;
diff --git a/pkgs/development/libraries/goocanvas/3.x.nix b/pkgs/development/libraries/goocanvas/3.x.nix
index 8a07f31b818d4..4058412d83055 100644
--- a/pkgs/development/libraries/goocanvas/3.x.nix
+++ b/pkgs/development/libraries/goocanvas/3.x.nix
@@ -50,7 +50,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "Canvas widget for GTK based on the the Cairo 2D library";
-    homepage = "https://wiki.gnome.org/Projects/GooCanvas";
+    homepage = "https://gitlab.gnome.org/Archive/goocanvas";
     license = licenses.lgpl2; # https://gitlab.gnome.org/GNOME/goocanvas/-/issues/12
     maintainers = with maintainers; [ bobby285271 ];
     platforms = platforms.unix;
diff --git a/pkgs/development/libraries/goocanvas/default.nix b/pkgs/development/libraries/goocanvas/default.nix
index 03268fb024c66..47ff343ffb630 100644
--- a/pkgs/development/libraries/goocanvas/default.nix
+++ b/pkgs/development/libraries/goocanvas/default.nix
@@ -22,7 +22,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "Canvas widget for GTK based on the the Cairo 2D library";
-    homepage = "https://wiki.gnome.org/Projects/GooCanvas";
+    homepage = "https://gitlab.gnome.org/Archive/goocanvas";
     license = licenses.lgpl2;
     platforms = lib.platforms.unix;
   };
diff --git a/pkgs/development/libraries/goocanvasmm/default.nix b/pkgs/development/libraries/goocanvasmm/default.nix
index 7642080086562..ccee4831dc7f4 100644
--- a/pkgs/development/libraries/goocanvasmm/default.nix
+++ b/pkgs/development/libraries/goocanvasmm/default.nix
@@ -25,7 +25,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "C++ bindings for GooCanvas";
-    homepage = "https://wiki.gnome.org/Projects/GooCanvas";
+    homepage = "https://gitlab.gnome.org/Archive/goocanvasmm";
     license = licenses.lgpl2;
     maintainers = with maintainers; [ ];
     platforms = platforms.unix;
diff --git a/pkgs/development/libraries/grilo-plugins/default.nix b/pkgs/development/libraries/grilo-plugins/default.nix
index 88b83a32918f9..4113ee2f5d7c3 100644
--- a/pkgs/development/libraries/grilo-plugins/default.nix
+++ b/pkgs/development/libraries/grilo-plugins/default.nix
@@ -92,7 +92,7 @@ stdenv.mkDerivation rec {
   };
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Projects/Grilo";
+    homepage = "https://gitlab.gnome.org/GNOME/grilo-plugins";
     description = "A collection of plugins for the Grilo framework";
     maintainers = teams.gnome.members;
     license = licenses.lgpl21Plus;
diff --git a/pkgs/development/libraries/grilo/default.nix b/pkgs/development/libraries/grilo/default.nix
index 49c957cec5dc5..06b524579ac42 100644
--- a/pkgs/development/libraries/grilo/default.nix
+++ b/pkgs/development/libraries/grilo/default.nix
@@ -71,7 +71,7 @@ stdenv.mkDerivation rec {
   };
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Projects/Grilo";
+    homepage = "https://gitlab.gnome.org/GNOME/grilo";
     description = "Framework that provides access to various sources of multimedia content, using a pluggable system";
     maintainers = teams.gnome.members;
     license = licenses.lgpl2Plus;
diff --git a/pkgs/development/libraries/gsound/default.nix b/pkgs/development/libraries/gsound/default.nix
index 3c7049e92efe5..e588a7adca624 100644
--- a/pkgs/development/libraries/gsound/default.nix
+++ b/pkgs/development/libraries/gsound/default.nix
@@ -22,7 +22,7 @@ stdenv.mkDerivation rec {
   };
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Projects/GSound";
+    homepage = "https://gitlab.gnome.org/GNOME/gsound";
     description = "Small library for playing system sounds";
     mainProgram = "gsound-play";
     maintainers = teams.gnome.members;
diff --git a/pkgs/development/libraries/gspell/default.nix b/pkgs/development/libraries/gspell/default.nix
index f1b8733cf84b4..13a9e4be04b5c 100644
--- a/pkgs/development/libraries/gspell/default.nix
+++ b/pkgs/development/libraries/gspell/default.nix
@@ -72,7 +72,7 @@ stdenv.mkDerivation rec {
   meta = with lib; {
     description = "A spell-checking library for GTK applications";
     mainProgram = "gspell-app1";
-    homepage = "https://wiki.gnome.org/Projects/gspell";
+    homepage = "https://gitlab.gnome.org/GNOME/gspell";
     license = licenses.lgpl21Plus;
     maintainers = teams.gnome.members;
     platforms = platforms.unix;
diff --git a/pkgs/development/libraries/gstreamer/good/default.nix b/pkgs/development/libraries/gstreamer/good/default.nix
index fbb79028bdaf7..19b786a86063c 100644
--- a/pkgs/development/libraries/gstreamer/good/default.nix
+++ b/pkgs/development/libraries/gstreamer/good/default.nix
@@ -39,6 +39,7 @@
 , enableJack ? true, libjack2
 , enableX11 ? stdenv.isLinux, xorg
 , ncurses
+, enableWayland ? stdenv.isLinux
 , wayland
 , wayland-protocols
 , libgudev
@@ -94,7 +95,7 @@ stdenv.mkDerivation rec {
   ]) ++ lib.optionals qt6Support (with qt6; [
     qtbase
     qttools
-  ]) ++ lib.optionals stdenv.isLinux [
+  ]) ++ lib.optionals enableWayland [
     wayland-protocols
   ];
 
@@ -148,6 +149,7 @@ stdenv.mkDerivation rec {
     libavc1394
     libiec61883
     libgudev
+  ] ++ lib.optionals enableWayland [
     wayland
   ] ++ lib.optionals enableJack [
     libjack2
diff --git a/pkgs/development/libraries/gtk-mac-integration/default.nix b/pkgs/development/libraries/gtk-mac-integration/default.nix
index f9d41916ecd64..7dd08878bce18 100644
--- a/pkgs/development/libraries/gtk-mac-integration/default.nix
+++ b/pkgs/development/libraries/gtk-mac-integration/default.nix
@@ -23,7 +23,7 @@ stdenv.mkDerivation rec {
   meta = with lib; {
     description = "Provides integration for GTK applications into the Mac desktop";
     license = licenses.lgpl21;
-    homepage = "https://wiki.gnome.org/Projects/GTK/OSX/Integration";
+    homepage = "https://gitlab.gnome.org/GNOME/gtk-mac-integration";
     maintainers = with maintainers; [ matthewbauer ];
     platforms = platforms.darwin;
   };
diff --git a/pkgs/development/libraries/gtkimageview/default.nix b/pkgs/development/libraries/gtkimageview/default.nix
index fb63d4f00c1de..19bcb4ad99c39 100644
--- a/pkgs/development/libraries/gtkimageview/default.nix
+++ b/pkgs/development/libraries/gtkimageview/default.nix
@@ -20,7 +20,7 @@ stdenv.mkDerivation rec {
   doCheck = true;
 
   meta = {
-    homepage = "https://wiki.gnome.org/Projects/GTK/GtkImageView";
+    homepage = "https://gitlab.gnome.org/Archive/gtkimageview";
 
     description = "Image viewer widget for GTK";
 
diff --git a/pkgs/development/libraries/gtksourceview/3.x.nix b/pkgs/development/libraries/gtksourceview/3.x.nix
index 704a7c3e9c545..fb5c72e8b34da 100644
--- a/pkgs/development/libraries/gtksourceview/3.x.nix
+++ b/pkgs/development/libraries/gtksourceview/3.x.nix
@@ -49,7 +49,7 @@ stdenv.mkDerivation (finalAttrs: {
   passthru.tests.pkg-config = testers.testMetaPkgConfig finalAttrs.finalPackage;
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Projects/GtkSourceView";
+    homepage = "https://gitlab.gnome.org/GNOME/gtksourceview";
     pkgConfigModules = [ "gtksourceview-3.0" ];
     platforms = with platforms; linux ++ darwin;
     license = licenses.lgpl21;
diff --git a/pkgs/development/libraries/gtksourceview/4.x.nix b/pkgs/development/libraries/gtksourceview/4.x.nix
index df66d4b9eb72e..1b427957c811a 100644
--- a/pkgs/development/libraries/gtksourceview/4.x.nix
+++ b/pkgs/development/libraries/gtksourceview/4.x.nix
@@ -122,7 +122,7 @@ stdenv.mkDerivation (finalAttrs: {
 
   meta = with lib; {
     description = "Source code editing widget for GTK";
-    homepage = "https://wiki.gnome.org/Projects/GtkSourceView";
+    homepage = "https://gitlab.gnome.org/GNOME/gtksourceview";
     pkgConfigModules = [ "gtksourceview-4" ];
     platforms = platforms.unix;
     license = licenses.lgpl21Plus;
diff --git a/pkgs/development/libraries/gtksourceview/5.x.nix b/pkgs/development/libraries/gtksourceview/5.x.nix
index ee2d694c18ff0..c54017312e1ed 100644
--- a/pkgs/development/libraries/gtksourceview/5.x.nix
+++ b/pkgs/development/libraries/gtksourceview/5.x.nix
@@ -110,7 +110,7 @@ stdenv.mkDerivation (finalAttrs: {
 
   meta = with lib; {
     description = "Source code editing widget for GTK";
-    homepage = "https://wiki.gnome.org/Projects/GtkSourceView";
+    homepage = "https://gitlab.gnome.org/GNOME/gtksourceview";
     pkgConfigModules = [ "gtksourceview-5" ];
     platforms = platforms.unix;
     license = licenses.lgpl21Plus;
diff --git a/pkgs/development/libraries/gupnp-dlna/default.nix b/pkgs/development/libraries/gupnp-dlna/default.nix
index 7761e3cbd880d..44e7c5b5f47c5 100644
--- a/pkgs/development/libraries/gupnp-dlna/default.nix
+++ b/pkgs/development/libraries/gupnp-dlna/default.nix
@@ -60,7 +60,7 @@ stdenv.mkDerivation rec {
   };
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Projects/GUPnP/";
+    homepage = "https://gitlab.gnome.org/GNOME/gupnp-dlna";
     description = "Library to ease DLNA-related bits for applications using GUPnP";
     license = licenses.lgpl2Plus;
     platforms = platforms.unix;
diff --git a/pkgs/development/libraries/hyena/default.nix b/pkgs/development/libraries/hyena/default.nix
index 177f6fe7909df..0a4e89b3b2de3 100644
--- a/pkgs/development/libraries/hyena/default.nix
+++ b/pkgs/development/libraries/hyena/default.nix
@@ -26,7 +26,7 @@ stdenv.mkDerivation rec {
   inherit monoDLLFixer;
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Attic/Hyena";
+    homepage = "https://gitlab.gnome.org/Archive/hyena";
     description = "A C# library which contains a hodge-podge of random stuff";
     longDescription = ''
       Hyena is a C# library used to make awesome applications. It contains a lot of random things,
diff --git a/pkgs/development/libraries/intel-gmmlib/default.nix b/pkgs/development/libraries/intel-gmmlib/default.nix
index 6d21c7bc6e1a3..5c647aaadfe62 100644
--- a/pkgs/development/libraries/intel-gmmlib/default.nix
+++ b/pkgs/development/libraries/intel-gmmlib/default.nix
@@ -9,13 +9,13 @@
 
 stdenv.mkDerivation rec {
   pname = "intel-gmmlib";
-  version = "22.3.18";
+  version = "22.3.19";
 
   src = fetchFromGitHub {
     owner = "intel";
     repo = "gmmlib";
     rev = "intel-gmmlib-${version}";
-    sha256 = "sha256-woEYEgvwf12aWCeYqSiosQAUJErGaEP3q8JER971lys=";
+    sha256 = "sha256-y35rcAo1CR8HvKD4hCtdMSSPSSnGaUf4l2Tdzbq5fFw=";
   };
 
   nativeBuildInputs = [ cmake ];
diff --git a/pkgs/development/libraries/json-glib/default.nix b/pkgs/development/libraries/json-glib/default.nix
index 79075929c651f..1f36ccdc051d4 100644
--- a/pkgs/development/libraries/json-glib/default.nix
+++ b/pkgs/development/libraries/json-glib/default.nix
@@ -98,7 +98,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "A library providing (de)serialization support for the JavaScript Object Notation (JSON) format";
-    homepage = "https://wiki.gnome.org/Projects/JsonGlib";
+    homepage = "https://gitlab.gnome.org/GNOME/json-glib";
     license = licenses.lgpl21Plus;
     maintainers = teams.gnome.members;
     platforms = with platforms; unix;
diff --git a/pkgs/development/libraries/lasem/default.nix b/pkgs/development/libraries/lasem/default.nix
index 80a5fc0e24d02..c76a695562509 100644
--- a/pkgs/development/libraries/lasem/default.nix
+++ b/pkgs/development/libraries/lasem/default.nix
@@ -32,7 +32,7 @@ stdenv.mkDerivation rec {
     description = "SVG and MathML rendering library";
     mainProgram = "lasem-render-0.4";
 
-    homepage = "https://wiki.gnome.org/Projects/Lasem";
+    homepage = "https://github.com/LasemProject/lasem";
     license = lib.licenses.gpl2Plus;
 
     platforms = lib.platforms.unix;
diff --git a/pkgs/development/libraries/libbluray/default.nix b/pkgs/development/libraries/libbluray/default.nix
index bc10d06b846cc..552259ce3babe 100644
--- a/pkgs/development/libraries/libbluray/default.nix
+++ b/pkgs/development/libraries/libbluray/default.nix
@@ -1,5 +1,5 @@
 { lib, stdenv, fetchurl, fetchpatch, pkg-config, fontconfig, autoreconfHook, DiskArbitration
-, withJava ? false, jdk, ant
+, withJava ? false, jdk17, ant, stripJavaArchivesHook
 , withAACS ? false, libaacs
 , withBDplus ? false, libbdplus
 , withMetadata ? true, libxml2
@@ -19,23 +19,18 @@ stdenv.mkDerivation rec {
   };
 
   nativeBuildInputs = [ pkg-config autoreconfHook ]
-    ++ lib.optionals withJava [ ant ];
+    ++ lib.optionals withJava [ jdk17 ant stripJavaArchivesHook ];
 
   buildInputs = [ fontconfig ]
-    ++ lib.optional withJava jdk
     ++ lib.optional withMetadata libxml2
     ++ lib.optional withFonts freetype
     ++ lib.optional stdenv.isDarwin DiskArbitration;
 
   propagatedBuildInputs = lib.optional withAACS libaacs;
 
-  NIX_LDFLAGS = lib.optionalString withAACS "-L${libaacs}/lib -laacs"
+  env.NIX_LDFLAGS = lib.optionalString withAACS "-L${libaacs}/lib -laacs"
     + lib.optionalString withBDplus " -L${libbdplus}/lib -lbdplus";
 
-  preConfigure = lib.optionalString withJava ''
-    export JDK_HOME="${jdk.home}"
-  '';
-
   configureFlags = lib.optional (!withJava) "--disable-bdjava-jar"
     ++ lib.optional (!withMetadata) "--without-libxml2"
     ++ lib.optional (!withFonts) "--without-freetype";
diff --git a/pkgs/development/libraries/libchamplain/default.nix b/pkgs/development/libraries/libchamplain/default.nix
index 065d412c91e14..f49d12e639db3 100644
--- a/pkgs/development/libraries/libchamplain/default.nix
+++ b/pkgs/development/libraries/libchamplain/default.nix
@@ -70,7 +70,7 @@ stdenv.mkDerivation rec {
   };
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Projects/libchamplain";
+    homepage = "https://gitlab.gnome.org/GNOME/libchamplain";
     license = licenses.lgpl2Plus;
 
     description = "C library providing a ClutterActor to display maps";
diff --git a/pkgs/development/libraries/libdazzle/default.nix b/pkgs/development/libraries/libdazzle/default.nix
index 38ba2e3b36156..1e7bb7d05e3ab 100644
--- a/pkgs/development/libraries/libdazzle/default.nix
+++ b/pkgs/development/libraries/libdazzle/default.nix
@@ -81,7 +81,7 @@ stdenv.mkDerivation rec {
       for those libraries. In other cases, our design isn't quite generic
       enough to work for everyone.
     '';
-    homepage = "https://wiki.gnome.org/Apps/Builder";
+    homepage = "https://gitlab.gnome.org/GNOME/libdazzle";
     license = licenses.gpl3Plus;
     maintainers = teams.gnome.members;
     platforms = platforms.unix;
diff --git a/pkgs/development/libraries/libepc/default.nix b/pkgs/development/libraries/libepc/default.nix
index a2822eae8d547..c9a1d09172a98 100644
--- a/pkgs/development/libraries/libepc/default.nix
+++ b/pkgs/development/libraries/libepc/default.nix
@@ -61,7 +61,7 @@ stdenv.mkDerivation (finalAttrs: {
 
   meta = with lib; {
     description = "Easy Publish and Consume Library";
-    homepage = "https://wiki.gnome.org/Projects/libepc";
+    homepage = "https://gitlab.gnome.org/Archive/libepc";
     license = licenses.lgpl21Plus;
     maintainers = teams.gnome.members;
     platforms = platforms.linux;
diff --git a/pkgs/development/libraries/libgdata/default.nix b/pkgs/development/libraries/libgdata/default.nix
index e0d3a7318a856..3f7242aedd335 100644
--- a/pkgs/development/libraries/libgdata/default.nix
+++ b/pkgs/development/libraries/libgdata/default.nix
@@ -78,7 +78,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "GData API library";
-    homepage = "https://wiki.gnome.org/Projects/libgdata";
+    homepage = "https://gitlab.gnome.org/GNOME/libgdata";
     maintainers = with maintainers; [ raskin ] ++ teams.gnome.members;
     platforms = platforms.linux;
     license = licenses.lgpl21Plus;
diff --git a/pkgs/development/libraries/libgee/default.nix b/pkgs/development/libraries/libgee/default.nix
index 7863235e0211e..0ae1886ebb62d 100644
--- a/pkgs/development/libraries/libgee/default.nix
+++ b/pkgs/development/libraries/libgee/default.nix
@@ -47,7 +47,7 @@ stdenv.mkDerivation (finalAttrs: {
 
   meta = with lib; {
     description = "Utility library providing GObject-based interfaces and classes for commonly used data structures";
-    homepage = "https://wiki.gnome.org/Projects/Libgee";
+    homepage = "https://gitlab.gnome.org/GNOME/libgee";
     license = licenses.lgpl21Plus;
     platforms = platforms.unix;
     maintainers = teams.gnome.members;
diff --git a/pkgs/development/libraries/libgit2-glib/default.nix b/pkgs/development/libraries/libgit2-glib/default.nix
index 9d16775f626b4..26b0a9907d111 100644
--- a/pkgs/development/libraries/libgit2-glib/default.nix
+++ b/pkgs/development/libraries/libgit2-glib/default.nix
@@ -65,7 +65,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "A glib wrapper library around the libgit2 git access library";
-    homepage = "https://wiki.gnome.org/Projects/Libgit2-glib";
+    homepage = "https://gitlab.gnome.org/GNOME/libgit2-glib";
     license = licenses.lgpl21Plus;
     maintainers = teams.gnome.members;
     platforms = platforms.linux;
diff --git a/pkgs/development/libraries/libgnome-games-support/2.0.nix b/pkgs/development/libraries/libgnome-games-support/2.0.nix
index 03166a423c3a5..bc8da8045899a 100644
--- a/pkgs/development/libraries/libgnome-games-support/2.0.nix
+++ b/pkgs/development/libraries/libgnome-games-support/2.0.nix
@@ -53,7 +53,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "Small library intended for internal use by GNOME Games, but it may be used by others";
-    homepage = "https://wiki.gnome.org/Apps/Games";
+    homepage = "https://gitlab.gnome.org/GNOME/libgnome-games-support";
     license = licenses.lgpl3Plus;
     maintainers = teams.gnome.members;
     platforms = platforms.unix;
diff --git a/pkgs/development/libraries/libgnome-games-support/default.nix b/pkgs/development/libraries/libgnome-games-support/default.nix
index e63d7f8fe656f..bdbdc10f514c8 100644
--- a/pkgs/development/libraries/libgnome-games-support/default.nix
+++ b/pkgs/development/libraries/libgnome-games-support/default.nix
@@ -50,7 +50,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "Small library intended for internal use by GNOME Games, but it may be used by others";
-    homepage = "https://wiki.gnome.org/Apps/Games";
+    homepage = "https://gitlab.gnome.org/GNOME/libgnome-games-support";
     license = licenses.lgpl3;
     maintainers = teams.gnome.members;
     platforms = platforms.unix;
diff --git a/pkgs/development/libraries/libgnome-keyring/default.nix b/pkgs/development/libraries/libgnome-keyring/default.nix
index f360e29ec2f24..f31f26539a55d 100644
--- a/pkgs/development/libraries/libgnome-keyring/default.nix
+++ b/pkgs/development/libraries/libgnome-keyring/default.nix
@@ -37,7 +37,7 @@ stdenv.mkDerivation (finalAttrs: {
   meta = {
     pkgConfigModules = [ "gnome-keyring-1" ];
     inherit (glib.meta) platforms maintainers;
-    homepage = "https://wiki.gnome.org/Projects/GnomeKeyring";
+    homepage = "https://gitlab.gnome.org/Archive/libgnome-keyring";
     license = with lib.licenses; [ gpl2 lgpl2 ];
   };
 })
diff --git a/pkgs/development/libraries/libgrss/default.nix b/pkgs/development/libraries/libgrss/default.nix
index 8cb978042e716..ce0c6e14edc28 100644
--- a/pkgs/development/libraries/libgrss/default.nix
+++ b/pkgs/development/libraries/libgrss/default.nix
@@ -58,7 +58,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "Glib abstaction to handle feeds in RSS, Atom and other formats";
-    homepage = "https://wiki.gnome.org/Projects/Libgrss";
+    homepage = "https://gitlab.gnome.org/GNOME/libgrss";
     license = licenses.lgpl3Plus;
     maintainers = teams.gnome.members;
     platforms = platforms.unix;
diff --git a/pkgs/development/libraries/libgudev/default.nix b/pkgs/development/libraries/libgudev/default.nix
index 68e3e42476e72..99ca086792fb0 100644
--- a/pkgs/development/libraries/libgudev/default.nix
+++ b/pkgs/development/libraries/libgudev/default.nix
@@ -69,7 +69,7 @@ stdenv.mkDerivation (finalAttrs: {
 
   meta = with lib; {
     description = "A library that provides GObject bindings for libudev";
-    homepage = "https://wiki.gnome.org/Projects/libgudev";
+    homepage = "https://gitlab.gnome.org/GNOME/libgudev";
     maintainers = [ maintainers.eelco ] ++ teams.gnome.members;
     platforms = platforms.linux;
     license = licenses.lgpl2Plus;
diff --git a/pkgs/development/libraries/libgweather/default.nix b/pkgs/development/libraries/libgweather/default.nix
index 53c4b5f259b76..58fb14167bd39 100644
--- a/pkgs/development/libraries/libgweather/default.nix
+++ b/pkgs/development/libraries/libgweather/default.nix
@@ -101,7 +101,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "A library to access weather information from online services for numerous locations";
-    homepage = "https://wiki.gnome.org/Projects/LibGWeather";
+    homepage = "https://gitlab.gnome.org/GNOME/libgweather";
     license = licenses.gpl2Plus;
     maintainers = teams.gnome.members;
     platforms = platforms.unix;
diff --git a/pkgs/development/libraries/libgxps/default.nix b/pkgs/development/libraries/libgxps/default.nix
index 3979391034006..041431651c3e2 100644
--- a/pkgs/development/libraries/libgxps/default.nix
+++ b/pkgs/development/libraries/libgxps/default.nix
@@ -32,7 +32,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "A GObject based library for handling and rendering XPS documents";
-    homepage = "https://wiki.gnome.org/Projects/libgxps";
+    homepage = "https://gitlab.gnome.org/GNOME/libgxps";
     license = licenses.lgpl21Plus;
     maintainers = teams.gnome.members;
     platforms = platforms.unix;
diff --git a/pkgs/development/libraries/libks/default.nix b/pkgs/development/libraries/libks/default.nix
index 0b1135f8522ba..520c8568ebc17 100644
--- a/pkgs/development/libraries/libks/default.nix
+++ b/pkgs/development/libraries/libks/default.nix
@@ -13,13 +13,13 @@
 
 stdenv.mkDerivation rec {
   pname = "libks";
-  version = "2.0.4";
+  version = "2.0.5";
 
   src = fetchFromGitHub {
     owner = "signalwire";
     repo = pname;
     rev = "v${version}";
-    sha256 = "sha256-G2ZsTm7qyEhkys+3lcuq1VsKTz3RpfodDekecRRk++w=";
+    sha256 = "sha256-cSBtNOJfau+7wQ5iUs4hnqSMoo8XYN9opwPfox2ke+E=";
   };
 
   patches = [
diff --git a/pkgs/development/libraries/libpeas/2.x.nix b/pkgs/development/libraries/libpeas/2.x.nix
index 38e4fe0550850..61fe424e2c224 100644
--- a/pkgs/development/libraries/libpeas/2.x.nix
+++ b/pkgs/development/libraries/libpeas/2.x.nix
@@ -89,7 +89,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "A GObject-based plugins engine";
-    homepage = "https://wiki.gnome.org/Projects/Libpeas";
+    homepage = "https://gitlab.gnome.org/GNOME/libpeas";
     license = licenses.gpl2Plus;
     platforms = platforms.unix;
     maintainers = teams.gnome.members;
diff --git a/pkgs/development/libraries/libpeas/default.nix b/pkgs/development/libraries/libpeas/default.nix
index f9d8be93c66c8..922bfba9ad232 100644
--- a/pkgs/development/libraries/libpeas/default.nix
+++ b/pkgs/development/libraries/libpeas/default.nix
@@ -84,7 +84,7 @@ stdenv.mkDerivation rec {
   meta = with lib; {
     description = "A GObject-based plugins engine";
     mainProgram = "peas-demo";
-    homepage = "https://wiki.gnome.org/Projects/Libpeas";
+    homepage = "https://gitlab.gnome.org/GNOME/libpeas";
     license = licenses.gpl2Plus;
     platforms = platforms.unix;
     maintainers = teams.gnome.members;
diff --git a/pkgs/development/libraries/librealsense/default.nix b/pkgs/development/libraries/librealsense/default.nix
index fe35759da63a9..cb69770f054a0 100644
--- a/pkgs/development/libraries/librealsense/default.nix
+++ b/pkgs/development/libraries/librealsense/default.nix
@@ -74,7 +74,7 @@ stdenv.mkDerivation rec {
   # ( https://github.com/IntelRealSense/meta-intel-realsense/issues/20 )
   postInstall = ''
     substituteInPlace $out/lib/cmake/realsense2/realsense2Targets.cmake \
-    --replace "\''${_IMPORT_PREFIX}/include" "$dev/include"
+    --replace-fail "\''${_IMPORT_PREFIX}/include" "$dev/include"
   '' + lib.optionalString enablePython  ''
     cp ../wrappers/python/pyrealsense2/__init__.py $out/${pythonPackages.python.sitePackages}/pyrealsense2
   '';
diff --git a/pkgs/development/libraries/librest/1.0.nix b/pkgs/development/libraries/librest/1.0.nix
index 1e134f62bad77..eff390cb2031a 100644
--- a/pkgs/development/libraries/librest/1.0.nix
+++ b/pkgs/development/libraries/librest/1.0.nix
@@ -91,7 +91,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "Helper library for RESTful services";
-    homepage = "https://wiki.gnome.org/Projects/Librest";
+    homepage = "https://gitlab.gnome.org/GNOME/librest";
     license = licenses.lgpl21Only;
     platforms = platforms.unix;
     maintainers = teams.gnome.members;
diff --git a/pkgs/development/libraries/librest/default.nix b/pkgs/development/libraries/librest/default.nix
index 19f7ced5986f4..de0ff52f1e1bf 100644
--- a/pkgs/development/libraries/librest/default.nix
+++ b/pkgs/development/libraries/librest/default.nix
@@ -55,7 +55,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "Helper library for RESTful services";
-    homepage = "https://wiki.gnome.org/Projects/Librest";
+    homepage = "https://gitlab.gnome.org/GNOME/librest";
     license = licenses.lgpl21Only;
     platforms = platforms.unix;
     maintainers = teams.gnome.members;
diff --git a/pkgs/development/libraries/librsvg/default.nix b/pkgs/development/libraries/librsvg/default.nix
index c5788e6903446..ee840b8e7f39b 100644
--- a/pkgs/development/libraries/librsvg/default.nix
+++ b/pkgs/development/libraries/librsvg/default.nix
@@ -217,7 +217,7 @@ stdenv.mkDerivation (finalAttrs: {
 
   meta = with lib; {
     description = "A small library to render SVG images to Cairo surfaces";
-    homepage = "https://wiki.gnome.org/Projects/LibRsvg";
+    homepage = "hhttps://gitlab.gnome.org/GNOME/librsvg";
     license = licenses.lgpl2Plus;
     maintainers = teams.gnome.members;
     mainProgram = "rsvg-convert";
diff --git a/pkgs/development/libraries/libsecret/default.nix b/pkgs/development/libraries/libsecret/default.nix
index 514b8c05177b3..040722ea406e8 100644
--- a/pkgs/development/libraries/libsecret/default.nix
+++ b/pkgs/development/libraries/libsecret/default.nix
@@ -121,7 +121,7 @@ stdenv.mkDerivation rec {
 
   meta = {
     description = "A library for storing and retrieving passwords and other secrets";
-    homepage = "https://wiki.gnome.org/Projects/Libsecret";
+    homepage = "https://gitlab.gnome.org/GNOME/libsecret";
     license = lib.licenses.lgpl21Plus;
     mainProgram = "secret-tool";
     inherit (glib.meta) platforms maintainers;
diff --git a/pkgs/development/libraries/libsoup/3.x.nix b/pkgs/development/libraries/libsoup/3.x.nix
index 6d1545af40796..4d5f30cf0b6e8 100644
--- a/pkgs/development/libraries/libsoup/3.x.nix
+++ b/pkgs/development/libraries/libsoup/3.x.nix
@@ -101,7 +101,7 @@ stdenv.mkDerivation rec {
 
   meta = {
     description = "HTTP client/server library for GNOME";
-    homepage = "https://wiki.gnome.org/Projects/libsoup";
+    homepage = "https://gitlab.gnome.org/GNOME/libsoup";
     license = lib.licenses.lgpl2Plus;
     inherit (glib.meta) maintainers platforms;
   };
diff --git a/pkgs/development/libraries/libsoup/default.nix b/pkgs/development/libraries/libsoup/default.nix
index 11e1a5a40f1e9..e92c59bc2f2c0 100644
--- a/pkgs/development/libraries/libsoup/default.nix
+++ b/pkgs/development/libraries/libsoup/default.nix
@@ -93,7 +93,7 @@ stdenv.mkDerivation rec {
 
   meta = {
     description = "HTTP client/server library for GNOME";
-    homepage = "https://wiki.gnome.org/Projects/libsoup";
+    homepage = "https://gitlab.gnome.org/GNOME/libsoup";
     license = lib.licenses.lgpl2Plus;
     inherit (glib.meta) maintainers platforms;
     pkgConfigModules = [
diff --git a/pkgs/development/libraries/libunique/3.x.nix b/pkgs/development/libraries/libunique/3.x.nix
index 780ae7418dded..678f685d4882d 100644
--- a/pkgs/development/libraries/libunique/3.x.nix
+++ b/pkgs/development/libraries/libunique/3.x.nix
@@ -20,7 +20,7 @@ stdenv.mkDerivation rec {
   buildInputs = [ dbus dbus-glib gtk3 gtk-doc docbook_xml_dtd_45 docbook_xsl libxslt libxml2 ];
 
   meta = {
-    homepage = "https://wiki.gnome.org/Attic/LibUnique";
+    homepage = "https://gitlab.gnome.org/Archive/unique";
     description = "A library for writing single instance applications";
     license = lib.licenses.lgpl21;
     maintainers = [ lib.maintainers.AndersonTorres ];
diff --git a/pkgs/development/libraries/libunique/default.nix b/pkgs/development/libraries/libunique/default.nix
index 13dc13e5e968e..f75aed442a852 100644
--- a/pkgs/development/libraries/libunique/default.nix
+++ b/pkgs/development/libraries/libunique/default.nix
@@ -31,7 +31,7 @@ stdenv.mkDerivation rec {
   doCheck = true;
 
   meta = {
-    homepage = "https://wiki.gnome.org/Attic/LibUnique";
+    homepage = "https://gitlab.gnome.org/Archive/unique";
     description = "A library for writing single instance applications";
     license = lib.licenses.lgpl21;
     platforms = with lib.platforms; linux ++ darwin;
diff --git a/pkgs/development/libraries/libunwind/default.nix b/pkgs/development/libraries/libunwind/default.nix
index 66f9f076dab49..5144abc6dc5b6 100644
--- a/pkgs/development/libraries/libunwind/default.nix
+++ b/pkgs/development/libraries/libunwind/default.nix
@@ -50,7 +50,7 @@ stdenv.mkDerivation rec {
     description = "A portable and efficient API to determine the call-chain of a program";
     maintainers = with maintainers; [ orivej ];
     # https://github.com/libunwind/libunwind#libunwind
-    platforms = [ "aarch64-linux" "armv5tel-linux" "armv6l-linux" "armv7a-linux" "armv7l-linux" "i686-freebsd13" "i686-linux" "loongarch64-linux" "mips64el-linux" "mipsel-linux" "powerpc64-linux" "powerpc64le-linux" "riscv64-linux" "s390x-linux" "x86_64-freebsd13" "x86_64-linux" "x86_64-solaris" ];
+    platforms = [ "aarch64-linux" "armv5tel-linux" "armv6l-linux" "armv7a-linux" "armv7l-linux" "i686-freebsd" "i686-linux" "loongarch64-linux" "mips64el-linux" "mipsel-linux" "powerpc64-linux" "powerpc64le-linux" "riscv64-linux" "s390x-linux" "x86_64-freebsd" "x86_64-linux" "x86_64-solaris" ];
     license = licenses.mit;
   };
 }
diff --git a/pkgs/development/libraries/libvirt/default.nix b/pkgs/development/libraries/libvirt/default.nix
index f82c5d18fb9d6..81dacdb493c91 100644
--- a/pkgs/development/libraries/libvirt/default.nix
+++ b/pkgs/development/libraries/libvirt/default.nix
@@ -9,6 +9,7 @@
 , dnsmasq
 , docutils
 , fetchFromGitLab
+, fetchpatch
 , gettext
 , glib
 , gnutls
@@ -126,6 +127,16 @@ stdenv.mkDerivation rec {
 
   patches = [
     ./0001-meson-patch-in-an-install-prefix-for-building-on-nix.patch
+    (fetchpatch {
+      name = "CVE-2024-2494.patch";
+      url = "https://gitlab.com/libvirt/libvirt/-/commit/8a3f8d957507c1f8223fdcf25a3ff885b15557f2.patch";
+      hash = "sha256-kxSIZ4bPOhN6PpJepoSF+EDTgdmazRWh3a3KSVfm1GU=";
+    })
+    (fetchpatch {
+      name = "CVE-2024-1441.patch";
+      url = "https://gitlab.com/libvirt/libvirt/-/commit/c664015fe3a7bf59db26686e9ed69af011c6ebb8.patch";
+      hash = "sha256-Qi/gk7+NPz9s9OpWOnF8XW6A75C9BbVxBTE4KVwalo4=";
+    })
   ] ++ lib.optionals enableZfs [
     (substituteAll {
       src = ./0002-substitute-zfs-and-zpool-commands.patch;
diff --git a/pkgs/development/libraries/libzapojit/default.nix b/pkgs/development/libraries/libzapojit/default.nix
index 8acb5e858df8b..43f9065dfa615 100644
--- a/pkgs/development/libraries/libzapojit/default.nix
+++ b/pkgs/development/libraries/libzapojit/default.nix
@@ -23,7 +23,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "GObject wrapper for the SkyDrive and Hotmail REST APIs";
-    homepage = "https://wiki.gnome.org/Projects/Zapojit";
+    homepage = "https://gitlab.gnome.org/Archive/libzapojit";
     license = licenses.lgpl21Plus;
     maintainers = teams.gnome.members;
     platforms = platforms.linux;
diff --git a/pkgs/development/libraries/mlt/default.nix b/pkgs/development/libraries/mlt/default.nix
index abe368f2ea62a..672bb36609ec5 100644
--- a/pkgs/development/libraries/mlt/default.nix
+++ b/pkgs/development/libraries/mlt/default.nix
@@ -40,13 +40,13 @@
 
 stdenv.mkDerivation rec {
   pname = "mlt";
-  version = "7.22.0";
+  version = "7.24.0";
 
   src = fetchFromGitHub {
     owner = "mltframework";
     repo = "mlt";
     rev = "v${version}";
-    hash = "sha256-vJKpeEdQIWBQRRdDui5ibSZtD8qUlDZBD+UQE+0cQqk=";
+    hash = "sha256-nQ9uRip6i9+/MziU4gQq1ah712J6f94cFQWTDYRjzyE=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/libraries/openssl/default.nix b/pkgs/development/libraries/openssl/default.nix
index c0b4fe75b610e..359ed2832d24d 100644
--- a/pkgs/development/libraries/openssl/default.nix
+++ b/pkgs/development/libraries/openssl/default.nix
@@ -309,4 +309,27 @@ in {
       license = licenses.asl20;
     };
   };
+
+  openssl_3_3 = common {
+    version = "3.3.0";
+    hash = "sha256-U+ZrBDMipgar8Ah+dpmg4DOjf6E/65dC3zXDozsY+wI=";
+
+    patches = [
+      ./3.0/nix-ssl-cert-file.patch
+
+      # openssl will only compile in KTLS if the current kernel supports it.
+      # This patch disables build-time detection.
+      ./3.0/openssl-disable-kernel-detection.patch
+
+      (if stdenv.hostPlatform.isDarwin
+       then ./3.2/use-etc-ssl-certs-darwin.patch
+       else ./3.2/use-etc-ssl-certs.patch)
+    ];
+
+    withDocs = true;
+
+    extraMeta = with lib; {
+      license = licenses.asl20;
+    };
+  };
 }
diff --git a/pkgs/development/libraries/python-qt/default.nix b/pkgs/development/libraries/python-qt/default.nix
index 16c2124cf0831..2b7ac684974e6 100644
--- a/pkgs/development/libraries/python-qt/default.nix
+++ b/pkgs/development/libraries/python-qt/default.nix
@@ -12,13 +12,13 @@
 
 stdenv.mkDerivation (finalAttrs: {
   pname = "python-qt";
-  version = "3.5.1";
+  version = "3.5.2";
 
   src = fetchFromGitHub {
     owner = "MeVisLab";
     repo = "pythonqt";
     rev = "v${finalAttrs.version}";
-    hash = "sha256-IED6UFk8UTle7g/yPC0nXOEgJwrs6sB/Dk3OTyVgHPo=";
+    hash = "sha256-Mpi1pAPS/UuzaBK7I1kI0HlS3dphcKiVXIPuJwdEDXM=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/libraries/totem-pl-parser/default.nix b/pkgs/development/libraries/totem-pl-parser/default.nix
index 871b724029c80..6598da9a6f821 100644
--- a/pkgs/development/libraries/totem-pl-parser/default.nix
+++ b/pkgs/development/libraries/totem-pl-parser/default.nix
@@ -34,7 +34,7 @@ stdenv.mkDerivation rec {
   ];
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Apps/Videos";
+    homepage = "https://gitlab.gnome.org/GNOME/totem-pl-parser";
     description = "Simple GObject-based library to parse and save a host of playlist formats";
     maintainers = teams.gnome.members;
     license = licenses.lgpl2;
diff --git a/pkgs/development/libraries/tracker-miners/default.nix b/pkgs/development/libraries/tracker-miners/default.nix
index 3abd9bd24ba4a..6d9d1628e4e70 100644
--- a/pkgs/development/libraries/tracker-miners/default.nix
+++ b/pkgs/development/libraries/tracker-miners/default.nix
@@ -135,7 +135,7 @@ stdenv.mkDerivation rec {
   };
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Projects/Tracker";
+    homepage = "https://gitlab.gnome.org/GNOME/tracker-miners";
     description = "Desktop-neutral user information store, search tool and indexer";
     maintainers = teams.gnome.members;
     license = licenses.gpl2Plus;
diff --git a/pkgs/development/libraries/tracker/default.nix b/pkgs/development/libraries/tracker/default.nix
index 45c5eb10152c7..48fc561ddd13b 100644
--- a/pkgs/development/libraries/tracker/default.nix
+++ b/pkgs/development/libraries/tracker/default.nix
@@ -171,7 +171,7 @@ stdenv.mkDerivation (finalAttrs: {
   };
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Projects/Tracker";
+    homepage = "https://tracker.gnome.org/";
     description = "Desktop-neutral user information store, search tool and indexer";
     mainProgram = "tracker3";
     maintainers = teams.gnome.members;
diff --git a/pkgs/development/libraries/waylib/default.nix b/pkgs/development/libraries/waylib/default.nix
index 9aa211ffd3e08..d8522e1f64ff7 100644
--- a/pkgs/development/libraries/waylib/default.nix
+++ b/pkgs/development/libraries/waylib/default.nix
@@ -1,6 +1,7 @@
 { stdenv
 , lib
 , fetchFromGitHub
+, fetchpatch
 , cmake
 , pkg-config
 , wayland-scanner
@@ -27,6 +28,14 @@ stdenv.mkDerivation (finalAttrs: {
     hash = "sha256-3IdrChuXQyQGhJ/7kTqmkV0PyuSNP53Y0Po01Fc9Qi0=";
   };
 
+  patches = [
+    (fetchpatch {
+      name = "fix-build-on-qt-6_7.patch";
+      url = "https://github.com/vioken/waylib/commit/09875ebedb074089ec57e71cbc8d8011f555be70.patch";
+      hash = "sha256-ulXlLxn7TOlXSl4N5mjXCy3PJhxVeyDwbwKeV9J/FSI=";
+    })
+  ];
+
   postPatch = ''
     substituteInPlace examples/tinywl/OutputDelegate.qml \
       --replace "/usr/share/wallpapers/deepin/desktop.jpg" \
diff --git a/pkgs/development/libraries/wlroots/default.nix b/pkgs/development/libraries/wlroots/default.nix
index e130da1664be7..f62a4661a9949 100644
--- a/pkgs/development/libraries/wlroots/default.nix
+++ b/pkgs/development/libraries/wlroots/default.nix
@@ -127,9 +127,11 @@ rec {
   wlroots_0_17 = generic {
     version = "0.17.3";
     hash = "sha256-jth6BKci3sVDC86o+gSHKyDWnibVcNmipm7nn0S6LTg=";
+    extraNativeBuildInputs = [
+      hwdata
+    ];
     extraBuildInputs = [
       ffmpeg
-      hwdata
       libliftoff
       libdisplay-info
     ];
diff --git a/pkgs/development/libraries/wxwidgets/wxGTK32.nix b/pkgs/development/libraries/wxwidgets/wxGTK32.nix
index 5bba7315f5cc4..3094f253a01ab 100644
--- a/pkgs/development/libraries/wxwidgets/wxGTK32.nix
+++ b/pkgs/development/libraries/wxwidgets/wxGTK32.nix
@@ -109,6 +109,8 @@ stdenv.mkDerivation rec {
     "--disable-monolithic"
     "--enable-mediactrl"
     "--with-nanosvg"
+    "--disable-rpath"
+    "--enable-repro-build"
     (if compat28 then "--enable-compat28" else "--disable-compat28")
     (if compat30 then "--enable-compat30" else "--disable-compat30")
   ] ++ lib.optional unicode "--enable-unicode"
diff --git a/pkgs/development/misc/yelp-tools/default.nix b/pkgs/development/misc/yelp-tools/default.nix
index 088b4ccf48af8..97ec85f6f2e9e 100644
--- a/pkgs/development/misc/yelp-tools/default.nix
+++ b/pkgs/development/misc/yelp-tools/default.nix
@@ -53,7 +53,7 @@ python3.pkgs.buildPythonApplication rec {
   };
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Apps/Yelp/Tools";
+    homepage = "https://gitlab.gnome.org/GNOME/yelp-tools";
     description = "Small programs that help you create, edit, manage, and publish your Mallard or DocBook documentation";
     maintainers = teams.gnome.members ++ (with maintainers; [ domenkozar ]);
     license = licenses.gpl2Plus;
diff --git a/pkgs/development/ocaml-modules/cstruct/ppx.nix b/pkgs/development/ocaml-modules/cstruct/ppx.nix
index 96814ebdc72ab..1cae0cc3dea48 100644
--- a/pkgs/development/ocaml-modules/cstruct/ppx.nix
+++ b/pkgs/development/ocaml-modules/cstruct/ppx.nix
@@ -1,4 +1,4 @@
-{ lib, buildDunePackage, cstruct, sexplib, ppxlib
+{ lib, buildDunePackage, ocaml, cstruct, sexplib, ppxlib
 , ocaml-migrate-parsetree-2
 , ounit, cppo, ppx_sexp_conv, cstruct-unix, cstruct-sexp
 }:
@@ -15,7 +15,7 @@ else
 
     propagatedBuildInputs = [ cstruct ppxlib sexplib ];
 
-    doCheck = true;
+    doCheck = !lib.versionAtLeast ocaml.version "5.1";
     nativeCheckInputs = [ cppo ];
     checkInputs = [ ounit ppx_sexp_conv cstruct-sexp cstruct-unix ocaml-migrate-parsetree-2 ];
   }
diff --git a/pkgs/development/python-modules/aiortm/default.nix b/pkgs/development/python-modules/aiortm/default.nix
index cbd44aa17016b..9e1384acc6792 100644
--- a/pkgs/development/python-modules/aiortm/default.nix
+++ b/pkgs/development/python-modules/aiortm/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "aiortm";
-  version = "0.8.12";
+  version = "0.8.13";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -25,7 +25,7 @@ buildPythonPackage rec {
     owner = "MartinHjelmare";
     repo = "aiortm";
     rev = "refs/tags/v${version}";
-    hash = "sha256-X7MqBDmVfLy5ajqhFcvA8oCaoxy3zLusXkB659qWR5E=";
+    hash = "sha256-JoolmxZFN0UG8wAMxMAYL8APFjpEcMECirCKUA/UBlY=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/amaranth-boards/default.nix b/pkgs/development/python-modules/amaranth-boards/default.nix
index 01f5dde3b562f..2475c93f8c617 100644
--- a/pkgs/development/python-modules/amaranth-boards/default.nix
+++ b/pkgs/development/python-modules/amaranth-boards/default.nix
@@ -9,7 +9,7 @@
 buildPythonPackage rec {
   pname = "amaranth-boards";
   version = "0-unstable-2023-12-13";
-  format = "setuptools";
+  pyproject = true;
   # python setup.py --version
   realVersion = "0.1.dev202+g${lib.substring 0 7 src.rev}";
 
@@ -20,8 +20,8 @@ buildPythonPackage rec {
     hash = "sha256-dwZCKMJnEY9RjzkcJ9r3TEC7W+Wfi/P7Hjl4/d60/qo=";
   };
 
-  nativeBuildInputs = [ setuptools-scm ];
-  propagatedBuildInputs = [ setuptools amaranth ];
+  nativeBuildInputs = [ setuptools setuptools-scm ];
+  dependencies = [ setuptools amaranth ];
 
   preBuild = ''
     export SETUPTOOLS_SCM_PRETEND_VERSION="${realVersion}"
diff --git a/pkgs/development/python-modules/amaranth-soc/default.nix b/pkgs/development/python-modules/amaranth-soc/default.nix
index b509ec551cf84..0742055e9cf24 100644
--- a/pkgs/development/python-modules/amaranth-soc/default.nix
+++ b/pkgs/development/python-modules/amaranth-soc/default.nix
@@ -20,7 +20,7 @@ buildPythonPackage rec {
   };
 
   nativeBuildInputs = [ pdm-backend ];
-  propagatedBuildInputs = [ amaranth ];
+  dependencies = [ amaranth ];
 
   preBuild = ''
     export PDM_BUILD_SCM_VERSION="${realVersion}"
diff --git a/pkgs/development/python-modules/amaranth/default.nix b/pkgs/development/python-modules/amaranth/default.nix
index a0e2675a0099a..5f2f072558dfe 100644
--- a/pkgs/development/python-modules/amaranth/default.nix
+++ b/pkgs/development/python-modules/amaranth/default.nix
@@ -34,7 +34,7 @@ buildPythonPackage rec {
     pdm-backend
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     jinja2
     pyvcd
   ] ++
diff --git a/pkgs/development/python-modules/anthropic/default.nix b/pkgs/development/python-modules/anthropic/default.nix
index 76b852c71f6dc..5eef6a51010a4 100644
--- a/pkgs/development/python-modules/anthropic/default.nix
+++ b/pkgs/development/python-modules/anthropic/default.nix
@@ -1,25 +1,27 @@
-{ lib
-, buildPythonPackage
-, fetchFromGitHub
-, hatchling
-, anyio
-, distro
-, dirty-equals
-, httpx
-, google-auth
-, sniffio
-, pydantic
-, pytest-asyncio
-, respx
-, tokenizers
-, typing-extensions
-, pytestCheckHook
-, pythonOlder
+{
+  lib,
+  anyio,
+  buildPythonPackage,
+  dirty-equals,
+  distro,
+  fetchFromGitHub,
+  google-auth,
+  hatch-fancy-pypi-readme,
+  hatchling,
+  httpx,
+  pydantic,
+  pytest-asyncio,
+  pytestCheckHook,
+  pythonOlder,
+  respx,
+  sniffio,
+  tokenizers,
+  typing-extensions,
 }:
 
 buildPythonPackage rec {
   pname = "anthropic";
-  version = "0.19.1";
+  version = "0.25.6";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -28,14 +30,15 @@ buildPythonPackage rec {
     owner = "anthropics";
     repo = "anthropic-sdk-python";
     rev = "refs/tags/v${version}";
-    hash = "sha256-D9asbwZ9puOuIK6w7cWJ2HmC3JYjamUZPOxVKWq+Va4=";
+    hash = "sha256-83TufOgu6W9UvoCEUgDiw6gXDAdwyIKEALVF0hjj6wk=";
   };
 
-  nativeBuildInputs = [
+  build-system = [
     hatchling
+    hatch-fancy-pypi-readme
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     anyio
     distro
     httpx
@@ -56,13 +59,21 @@ buildPythonPackage rec {
     respx
   ];
 
+  pythonImportsCheck = [ "anthropic" ];
+
+  disabledTests = [
+    # Test require network access
+    "test_copy_build_request"
+  ];
+
   disabledTestPaths = [
-    # require network access
+    # Test require network access
     "tests/api_resources"
   ];
 
-  pythonImportsCheck = [
-    "anthropic"
+  pytestFlagsArray = [
+    "-W"
+    "ignore::DeprecationWarning"
   ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/birch/default.nix b/pkgs/development/python-modules/birch/default.nix
index 1dd4848427e52..56c95e415c319 100644
--- a/pkgs/development/python-modules/birch/default.nix
+++ b/pkgs/development/python-modules/birch/default.nix
@@ -31,20 +31,20 @@ buildPythonPackage rec {
 
   postPatch = ''
     substituteInPlace pytest.ini \
-      --replace  \
+      --replace-fail  \
         "--cov" \
         "#--cov"
 
     # configure correct version, which fails due to missing .git
     substituteInPlace versioneer.py birch/_version.py \
-      --replace '"0+unknown"' '"${version}"'
+      --replace-fail '"0+unknown"' '"${version}"'
   '';
 
   nativeBuildInputs = [
     setuptools
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     strct
   ];
 
diff --git a/pkgs/development/python-modules/boto3-stubs/default.nix b/pkgs/development/python-modules/boto3-stubs/default.nix
index 53fa22914a9bf..06bbc1752fb47 100644
--- a/pkgs/development/python-modules/boto3-stubs/default.nix
+++ b/pkgs/development/python-modules/boto3-stubs/default.nix
@@ -366,7 +366,7 @@
 
 buildPythonPackage rec {
   pname = "boto3-stubs";
-  version = "1.34.94";
+  version = "1.34.95";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -374,7 +374,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "boto3_stubs";
     inherit version;
-    hash = "sha256-ZyKwsCQpPrN3E7jsNdAuLELEi0NhWoVExAKXLbBTQS0=";
+    hash = "sha256-QSAGsn7nB+m1GghLAqySsUOvijtWcnWCr+wqds6Tw7Y=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/cachier/default.nix b/pkgs/development/python-modules/cachier/default.nix
index 037f02b4d3ee1..e8fe51d4ded7b 100644
--- a/pkgs/development/python-modules/cachier/default.nix
+++ b/pkgs/development/python-modules/cachier/default.nix
@@ -35,14 +35,14 @@ buildPythonPackage rec {
     setuptools
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     watchdog
     portalocker
   ];
 
   preCheck = ''
     substituteInPlace pyproject.toml \
-      --replace  \
+      --replace-fail  \
         '"--cov' \
         '#"--cov'
   '';
diff --git a/pkgs/development/python-modules/desktop-notifier/default.nix b/pkgs/development/python-modules/desktop-notifier/default.nix
index b56a6b0849d06..708c971943ec8 100644
--- a/pkgs/development/python-modules/desktop-notifier/default.nix
+++ b/pkgs/development/python-modules/desktop-notifier/default.nix
@@ -6,6 +6,7 @@
 , packaging
 , setuptools
 , dbus-next
+, rubicon-objc
 }:
 
 buildPythonPackage rec {
@@ -30,6 +31,8 @@ buildPythonPackage rec {
     packaging
   ] ++ lib.optionals stdenv.isLinux [
     dbus-next
+  ] ++ lib.optionals stdenv.hostPlatform.isDarwin [
+    rubicon-objc
   ];
 
   # no tests available, do the imports check instead
@@ -45,6 +48,5 @@ buildPythonPackage rec {
     changelog = "https://github.com/samschott/desktop-notifier/releases/tag/v${version}";
     license = licenses.mit;
     maintainers = with maintainers; [ sfrijters ];
-    platforms = platforms.linux;
   };
 }
diff --git a/pkgs/development/python-modules/domeneshop/default.nix b/pkgs/development/python-modules/domeneshop/default.nix
index b266412219b42..ab01424c09405 100644
--- a/pkgs/development/python-modules/domeneshop/default.nix
+++ b/pkgs/development/python-modules/domeneshop/default.nix
@@ -2,6 +2,7 @@
 , buildPythonPackage
 , fetchPypi
 , pythonOlder
+, setuptools
 , urllib3
 , pyopenssl
 , cryptography
@@ -12,7 +13,7 @@
 buildPythonPackage rec {
   pname = "domeneshop";
   version = "0.4.3";
-  format = "setuptools";
+  pyproject = true;
 
   disabled = pythonOlder "3.4";
 
@@ -21,7 +22,11 @@ buildPythonPackage rec {
     hash = "sha256-kL0X1mEsmVWqnq5NgsMBxeAu48zjmi3muhZYryTCOMo=";
   };
 
-  propagatedBuildInputs = [
+  nativeBuildInputs = [
+    setuptools
+  ];
+
+  dependencies = [
     certifi
     urllib3
   ];
diff --git a/pkgs/development/python-modules/duckdb-engine/default.nix b/pkgs/development/python-modules/duckdb-engine/default.nix
index 955334bdf283d..be851c7e16fa9 100644
--- a/pkgs/development/python-modules/duckdb-engine/default.nix
+++ b/pkgs/development/python-modules/duckdb-engine/default.nix
@@ -6,7 +6,9 @@
 , duckdb
 , hypothesis
 , ipython-sql
+, pandas
 , poetry-core
+, pytest-remotedata
 , snapshottest
 , sqlalchemy
 , typing-extensions
@@ -14,20 +16,18 @@
 
 buildPythonPackage rec {
   pname = "duckdb-engine";
-  version = "0.11.2";
+  version = "0.12.0";
   pyproject = true;
 
-  disabled = pythonOlder "3.7";
+  disabled = pythonOlder "3.8";
 
   src = fetchFromGitHub {
     repo = "duckdb_engine";
     owner = "Mause";
     rev = "refs/tags/v${version}";
-    hash = "sha256-yW1gaZ0B6JNX98KzAxf146goniNmWnkMUmJRrScot1w=";
+    hash = "sha256-cm0vbz0VZ2Ws6FDWJO16q4KZW2obs0CBNrfY9jmR+6A=";
   };
 
-  patches = [ ./remote_data.patch ];
-
   nativeBuildInputs = [
     poetry-core
   ];
@@ -42,24 +42,27 @@ buildPythonPackage rec {
   '';
 
   disabledTests = [
-    # this test tries to download the httpfs extension
-    "test_preload_extension"
-    "test_motherduck"
     # test should be skipped based on sqlalchemy version but isn't and fails
     "test_commit"
-    # rowcount no longer generates an attribute error.
-    "test_rowcount"
   ];
 
   nativeCheckInputs = [
     pytestCheckHook
+  ];
+
+  checkInputs = [
     hypothesis
     ipython-sql
-    # TODO(cpcloud): include pandas here when it supports sqlalchemy 2.0
+    pandas
+    pytest-remotedata
     snapshottest
     typing-extensions
   ];
 
+  pytestFlagsArray = [
+    "-m" "'not remote_data'"
+  ];
+
   pythonImportsCheck = [
     "duckdb_engine"
   ];
diff --git a/pkgs/development/python-modules/duckdb-engine/remote_data.patch b/pkgs/development/python-modules/duckdb-engine/remote_data.patch
deleted file mode 100644
index 1c887acf6caea..0000000000000
--- a/pkgs/development/python-modules/duckdb-engine/remote_data.patch
+++ /dev/null
@@ -1,24 +0,0 @@
-diff --git a/duckdb_engine/tests/test_basic.py b/duckdb_engine/tests/test_basic.py
-index 302636f..ed20f12 100644
---- a/duckdb_engine/tests/test_basic.py
-+++ b/duckdb_engine/tests/test_basic.py
-@@ -183,7 +183,6 @@ def test_get_views(engine: Engine) -> None:
- 
- 
- @mark.skipif(os.uname().machine == "aarch64", reason="not supported on aarch64")
--@mark.remote_data
- def test_preload_extension() -> None:
-     duckdb.default_connection.execute("INSTALL httpfs")
-     engine = create_engine(
-diff --git a/duckdb_engine/tests/test_integration.py b/duckdb_engine/tests/test_integration.py
-index 349c976..bf3dbaa 100644
---- a/duckdb_engine/tests/test_integration.py
-+++ b/duckdb_engine/tests/test_integration.py
-@@ -24,7 +24,6 @@ def test_integration(engine: Engine) -> None:
-         conn.execute(text("select * from test_df"))
- 
- 
--@mark.remote_data
- @mark.skipif(
-     "dev" in duckdb.__version__, reason="md extension not available for dev builds"  # type: ignore[attr-defined]
- )
diff --git a/pkgs/development/python-modules/duckdb/default.nix b/pkgs/development/python-modules/duckdb/default.nix
index 83fd0bbb6908e..34f20998ef3d5 100644
--- a/pkgs/development/python-modules/duckdb/default.nix
+++ b/pkgs/development/python-modules/duckdb/default.nix
@@ -25,7 +25,7 @@ buildPythonPackage rec {
     # 2. default to extension autoload & autoinstall disabled
     substituteInPlace setup.py \
       --replace-fail "ParallelCompile()" 'ParallelCompile("NIX_BUILD_CORES")' \
-      --replace-fail "define_macros.extend([('DUCKDB_EXTENSION_AUTOLOAD_DEFAULT', '1'), ('DUCKDB_EXTENSION_AUTOINSTALL_DEFAULT', '1')])" ""
+      --replace-fail "define_macros.extend([('DUCKDB_EXTENSION_AUTOLOAD_DEFAULT', '1'), ('DUCKDB_EXTENSION_AUTOINSTALL_DEFAULT', '1')])" "pass"
   '';
 
   env = {
@@ -34,8 +34,6 @@ buildPythonPackage rec {
     OVERRIDE_GIT_DESCRIBE="v${version}-0-g${rev}";
   };
 
-  dontPretendSetuptoolsSCMVersion = true;
-
   nativeBuildInputs = [
     pybind11
     setuptools-scm
diff --git a/pkgs/development/python-modules/ffmpy/default.nix b/pkgs/development/python-modules/ffmpy/default.nix
index 8e00a4678ebff..974e2bcd8fdac 100644
--- a/pkgs/development/python-modules/ffmpy/default.nix
+++ b/pkgs/development/python-modules/ffmpy/default.nix
@@ -25,7 +25,7 @@ buildPythonPackage rec {
   postPatch = ''
     # default to store ffmpeg
     substituteInPlace ffmpy.py \
-      --replace 'executable="ffmpeg",' 'executable="${ffmpeg-headless}/bin/ffmpeg",'
+      --replace-fail 'executable="ffmpeg",' 'executable="${ffmpeg-headless}/bin/ffmpeg",'
 
     #  The tests test a mock that does not behave like ffmpeg. If we default to the nix-store ffmpeg they fail.
     for fname in tests/*.py; do
diff --git a/pkgs/development/python-modules/flake8-bugbear/default.nix b/pkgs/development/python-modules/flake8-bugbear/default.nix
index 75af6d9b9757d..5a6305744dbd8 100644
--- a/pkgs/development/python-modules/flake8-bugbear/default.nix
+++ b/pkgs/development/python-modules/flake8-bugbear/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "flake8-bugbear";
-  version = "24.4.21";
+  version = "24.4.26";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "PyCQA";
     repo = pname;
     rev = "refs/tags/${version}";
-    hash = "sha256-6jKVKVJuNpdKLzl2dTkr1cvArGWCWvuhyjww05r9W/c=";
+    hash = "sha256-jJ4/l2nzjqJDCe1pFrdkMvB5WJ+GJarOHgGZSzCS6nc=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/frozendict/default.nix b/pkgs/development/python-modules/frozendict/default.nix
index e1ded2da5f9b5..5405e570ed8dc 100644
--- a/pkgs/development/python-modules/frozendict/default.nix
+++ b/pkgs/development/python-modules/frozendict/default.nix
@@ -1,6 +1,7 @@
 { lib
 , buildPythonPackage
 , fetchFromGitHub
+, setuptools
 , pytestCheckHook
 , pythonAtLeast
 , pythonOlder
@@ -9,7 +10,7 @@
 buildPythonPackage rec {
   pname = "frozendict";
   version = "2.4.2";
-  format = "setuptools";
+  pyproject = true;
 
   disabled = pythonOlder "3.6";
 
@@ -32,6 +33,10 @@ buildPythonPackage rec {
     fi
   '';
 
+  nativeBuildInputs = [
+    setuptools
+  ];
+
   nativeCheckInputs = [
     pytestCheckHook
   ];
diff --git a/pkgs/development/python-modules/gekko/default.nix b/pkgs/development/python-modules/gekko/default.nix
index 24fd7423b8c39..d62c1f3dbfd1b 100644
--- a/pkgs/development/python-modules/gekko/default.nix
+++ b/pkgs/development/python-modules/gekko/default.nix
@@ -33,6 +33,6 @@ buildPythonPackage rec {
     homepage = "https://github.com/BYU-PRISM/GEKKO";
     changelog = "https://github.com/BYU-PRISM/GEKKO/releases/tag/v${version}";
     license = licenses.mit;
-    maintainers = with maintainers; [ ayes-web ];
+    maintainers = with maintainers; [ BatteredBunny ];
   };
 }
diff --git a/pkgs/development/python-modules/geopandas/default.nix b/pkgs/development/python-modules/geopandas/default.nix
index 522e0f6e59e33..f786d3b252938 100644
--- a/pkgs/development/python-modules/geopandas/default.nix
+++ b/pkgs/development/python-modules/geopandas/default.nix
@@ -2,20 +2,22 @@
 , stdenv
 , buildPythonPackage
 , fetchFromGitHub
+, pytestCheckHook
+, pythonOlder
+, setuptools
+
 , fiona
 , packaging
 , pandas
 , pyproj
-, pytestCheckHook
-, pythonOlder
 , rtree
 , shapely
 }:
 
 buildPythonPackage rec {
   pname = "geopandas";
-  version = "0.14.3";
-  format = "setuptools";
+  version = "0.14.4";
+  pyproject = true;
 
   disabled = pythonOlder "3.9";
 
@@ -23,9 +25,13 @@ buildPythonPackage rec {
     owner = "geopandas";
     repo = "geopandas";
     rev = "refs/tags/v${version}";
-    hash = "sha256-qAINoqnCVfpg2mQhnu0qT/5EjUB+9a3//H8vJJnyj6A=";
+    hash = "sha256-FBhPcae8bnNnsfr14I1p22VhoOf9USF9DAcrAqx+zso=";
   };
 
+  build-system = [
+    setuptools
+  ];
+
   propagatedBuildInputs = [
     fiona
     packaging
diff --git a/pkgs/development/python-modules/govee-local-api/default.nix b/pkgs/development/python-modules/govee-local-api/default.nix
index 03501fa0cbcf3..6cf2fa9b29c20 100644
--- a/pkgs/development/python-modules/govee-local-api/default.nix
+++ b/pkgs/development/python-modules/govee-local-api/default.nix
@@ -1,10 +1,11 @@
-{ lib
-, buildPythonPackage
-, fetchFromGitHub
-, poetry-core
-, poetry-dynamic-versioning
-, pytestCheckHook
-, pythonOlder
+{
+  lib,
+  buildPythonPackage,
+  fetchFromGitHub,
+  poetry-core,
+  poetry-dynamic-versioning,
+  pytestCheckHook,
+  pythonOlder,
 }:
 
 buildPythonPackage rec {
@@ -21,21 +22,17 @@ buildPythonPackage rec {
     hash = "sha256-J4SG4n6LIZ/G6pEXAzliV7uTWzqsH7rtFe3Y7BJ2dWE=";
   };
 
-  nativeBuildInputs = [
+  build-system = [
     poetry-core
     poetry-dynamic-versioning
   ];
 
-  nativeCheckInputs = [
-    pytestCheckHook
-  ];
+  nativeCheckInputs = [ pytestCheckHook ];
 
-  pythonImportsCheck = [
-    "govee_local_api"
-  ];
+  pythonImportsCheck = [ "govee_local_api" ];
 
   meta = with lib; {
-    description = "";
+    description = "Library to communicate with Govee local API";
     homepage = "https://github.com/Galorhallen/govee-local-api";
     changelog = "https://github.com/Galorhallen/govee-local-api/releases/tag/v${version}";
     license = licenses.asl20;
diff --git a/pkgs/development/python-modules/gradio-pdf/default.nix b/pkgs/development/python-modules/gradio-pdf/default.nix
index caa3ddbaa6b80..4a5128455e6d5 100644
--- a/pkgs/development/python-modules/gradio-pdf/default.nix
+++ b/pkgs/development/python-modules/gradio-pdf/default.nix
@@ -25,7 +25,7 @@ buildPythonPackage rec {
     hatchling
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     gradio-client
   ];
 
diff --git a/pkgs/development/python-modules/gradio/client.nix b/pkgs/development/python-modules/gradio/client.nix
index 2c3abd4c0e785..96c293d399c55 100644
--- a/pkgs/development/python-modules/gradio/client.nix
+++ b/pkgs/development/python-modules/gradio/client.nix
@@ -59,7 +59,7 @@ buildPythonPackage rec {
     pythonRelaxDepsHook
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     setuptools # needed for 'pkg_resources'
     fsspec
     httpx
diff --git a/pkgs/development/python-modules/gradio/default.nix b/pkgs/development/python-modules/gradio/default.nix
index 69e57b821a69c..6c735123aca18 100644
--- a/pkgs/development/python-modules/gradio/default.nix
+++ b/pkgs/development/python-modules/gradio/default.nix
@@ -99,7 +99,7 @@ buildPythonPackage rec {
     hatch-fancy-pypi-readme
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     setuptools # needed for 'pkg_resources'
     aiofiles
     altair
diff --git a/pkgs/development/python-modules/hdf5plugin/default.nix b/pkgs/development/python-modules/hdf5plugin/default.nix
index c2cfe5843c426..7d4019d28ce29 100644
--- a/pkgs/development/python-modules/hdf5plugin/default.nix
+++ b/pkgs/development/python-modules/hdf5plugin/default.nix
@@ -16,7 +16,7 @@ buildPythonPackage rec {
     hash = "sha256-MnqY1PyGzo31H696J9CekiA2rJrUYzUMDC3UJMZaFLA=";
   };
 
-  propagatedBuildInputs = [
+  dependencies = [
     h5py
   ];
 
diff --git a/pkgs/development/python-modules/instructor/default.nix b/pkgs/development/python-modules/instructor/default.nix
index 0370c356d9fcc..bb36e7a8abf21 100644
--- a/pkgs/development/python-modules/instructor/default.nix
+++ b/pkgs/development/python-modules/instructor/default.nix
@@ -1,24 +1,50 @@
-{ lib
-, python3
-, fetchPypi
-, buildPythonPackage
+{
+  lib,
+  aiohttp,
+  anthropic,
+  buildPythonPackage,
+  docstring-parser,
+  fetchFromGitHub,
+  openai,
+  poetry-core,
+  pydantic,
+  pytest-examples,
+  pytest-asyncio,
+  pytestCheckHook,
+  fastapi,
+  diskcache,
+  redis,
+  pythonOlder,
+  pythonRelaxDepsHook,
+  rich,
+  tenacity,
+  typer,
 }:
 
 buildPythonPackage rec {
   pname = "instructor";
-  version = "0.6.8";
+  version = "1.2.3";
   pyproject = true;
 
-  src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-4mHXPes1NdYu53XEN7gq626cKy9ju1M7U6n6akfbuVo=";
+  disabled = pythonOlder "3.9";
+
+  src = fetchFromGitHub {
+    owner = "jxnl";
+    repo = "instructor";
+    rev = "refs/tags/${version}";
+    hash = "sha256-LmorlFKIG7iPAK4pDbQqjxjiwB1md3u52B4u5WlqqTk=";
   };
 
-  nativeBuildInputs = [
-    python3.pkgs.poetry-core
+  pythonRelaxDeps = [
+    "docstring-parser"
+    "pydantic"
   ];
 
-  propagatedBuildInputs = with python3.pkgs; [
+  build-system = [ poetry-core ];
+
+  nativeBuildInputs = [ pythonRelaxDepsHook ];
+
+  dependencies = [
     aiohttp
     docstring-parser
     openai
@@ -28,8 +54,31 @@ buildPythonPackage rec {
     typer
   ];
 
+  nativeCheckInputs = [
+    anthropic
+    fastapi
+    redis
+    diskcache
+    pytest-asyncio
+    pytest-examples
+    pytestCheckHook
+  ];
+
   pythonImportsCheck = [ "instructor" ];
 
+  disabledTests = [
+    # Tests require OpenAI API key
+    "test_partial"
+    "successfully"
+  ];
+
+  disabledTestPaths = [
+    # Tests require OpenAI API key
+    "tests/test_distil.py"
+    "tests/test_new_client.py"
+    "tests/llm/"
+  ];
+
   meta = with lib; {
     description = "Structured outputs for llm";
     homepage = "https://github.com/jxnl/instructor";
diff --git a/pkgs/development/python-modules/langchain-community/default.nix b/pkgs/development/python-modules/langchain-community/default.nix
index 472022947fed5..af29f6068b045 100644
--- a/pkgs/development/python-modules/langchain-community/default.nix
+++ b/pkgs/development/python-modules/langchain-community/default.nix
@@ -18,7 +18,7 @@
 
 buildPythonPackage rec {
   pname = "langchain-community";
-  version = "0.0.33";
+  version = "0.0.36";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "langchain_community";
     inherit version;
-    hash = "sha256-u1bbwe8RygnyWEaOETaHga3akhnhRAc+MM2mlJbTQrI=";
+    hash = "sha256-l76dAM8RnJYeA+0ibgTmcPUbXUL1sF/8NRhZj6bSDHQ=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/langchain-core/default.nix b/pkgs/development/python-modules/langchain-core/default.nix
index 72ce1715493f3..3c0b421564492 100644
--- a/pkgs/development/python-modules/langchain-core/default.nix
+++ b/pkgs/development/python-modules/langchain-core/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "langchain-core";
-  version = "0.1.46";
+  version = "0.1.48";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -25,7 +25,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "langchain_core";
     inherit version;
-    hash = "sha256-F8QWNJ9cepgI5w43JXSaOi31CI8ezKBFyIOHGqlfnJ4=";
+    hash = "sha256-8KmwqPIvIZ72/YTisdkqgBToRRTAobVTNw/UApaBPBY=";
   };
 
   pythonRelaxDeps = [
diff --git a/pkgs/development/python-modules/langchain/default.nix b/pkgs/development/python-modules/langchain/default.nix
index 48c2c0db93a1b..ddcb01d7c4506 100644
--- a/pkgs/development/python-modules/langchain/default.nix
+++ b/pkgs/development/python-modules/langchain/default.nix
@@ -158,6 +158,8 @@ buildPythonPackage rec {
     # AssertionErrors
     "test_callback_handlers"
     "test_generic_fake_chat_model"
+    # Test is outdated
+    "test_serializable_mapping"
   ];
 
   pythonImportsCheck = [ "langchain" ];
diff --git a/pkgs/development/python-modules/langsmith/default.nix b/pkgs/development/python-modules/langsmith/default.nix
index d77c613384754..9bf32dc7a1582 100644
--- a/pkgs/development/python-modules/langsmith/default.nix
+++ b/pkgs/development/python-modules/langsmith/default.nix
@@ -1,12 +1,14 @@
 {
   lib,
   stdenv,
+  anthropic,
   attr,
   buildPythonPackage,
   fastapi,
   fetchFromGitHub,
   freezegun,
   httpx,
+  instructor,
   orjson,
   poetry-core,
   pydantic,
@@ -20,7 +22,7 @@
 
 buildPythonPackage rec {
   pname = "langsmith";
-  version = "0.1.48";
+  version = "0.1.52";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -29,7 +31,7 @@ buildPythonPackage rec {
     owner = "langchain-ai";
     repo = "langsmith-sdk";
     rev = "refs/tags/v${version}";
-    hash = "sha256-n24rlulncJHNyHFqszEbALGfnT7+tTGjLjwR7Fw1smI=";
+    hash = "sha256-kTl+H1odRYDZc1KEuopZV9PvOQBd4QioWMhb3pD6xKE=";
   };
 
   sourceRoot = "${src.name}/python";
@@ -48,9 +50,11 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
+    anthropic
     fastapi
     freezegun
     httpx
+    instructor
     pytest-asyncio
     pytestCheckHook
     uvicorn
@@ -81,6 +85,7 @@ buildPythonPackage rec {
     "tests/unit_tests/test_client.py"
     # Tests require a Langsmith API key
     "tests/evaluation/test_evaluation.py"
+    "tests/external/test_instructor_evals.py"
   ];
 
   pythonImportsCheck = [ "langsmith" ];
diff --git a/pkgs/development/python-modules/maestral/default.nix b/pkgs/development/python-modules/maestral/default.nix
index 5e658bdea69f6..885911b181c8f 100644
--- a/pkgs/development/python-modules/maestral/default.nix
+++ b/pkgs/development/python-modules/maestral/default.nix
@@ -1,4 +1,5 @@
 { lib
+, stdenv
 , buildPythonPackage
 , fetchFromGitHub
 , makePythonPath
@@ -17,6 +18,7 @@
 , pyro5
 , requests
 , rich
+, rubicon-objc
 , setuptools
 , survey
 , typing-extensions
@@ -59,6 +61,8 @@ buildPythonPackage rec {
     typing-extensions
     watchdog
     xattr
+  ] ++ lib.optionals stdenv.hostPlatform.isDarwin [
+    rubicon-objc
   ];
 
   makeWrapperArgs = [
@@ -71,6 +75,9 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  # ModuleNotFoundError: No module named '_watchdog_fsevents'
+  doCheck = !(stdenv.hostPlatform.isDarwin && stdenv.hostPlatform.isx86_64);
+
   preCheck = ''
     export HOME=$(mktemp -d)
   '';
@@ -90,6 +97,19 @@ buildPythonPackage rec {
     "test_locking_multiprocess"
     # OSError: [Errno 95] Operation not supported
     "test_move_preserves_xattrs"
+  ] ++ lib.optionals stdenv.hostPlatform.isDarwin [
+    # maetral daemon does not start but worked in real environment
+    "test_catching_non_ignored_events"
+    "test_connection"
+    "test_event_handler"
+    "test_fs_ignore_tree_creation"
+    "test_lifecycle"
+    "test_notify_level"
+    "test_notify_snooze"
+    "test_receiving_events"
+    "test_remote_exceptions"
+    "test_start_already_running"
+    "test_stop"
   ];
 
   pythonImportsCheck = [
@@ -104,7 +124,6 @@ buildPythonPackage rec {
     homepage = "https://maestral.app";
     changelog = "https://github.com/samschott/maestral/releases/tag/v${version}";
     license = licenses.mit;
-    maintainers = with maintainers; [ peterhoeg sfrijters ];
-    platforms = platforms.unix;
+    maintainers = with maintainers; [ natsukium peterhoeg sfrijters ];
   };
 }
diff --git a/pkgs/development/python-modules/manim/default.nix b/pkgs/development/python-modules/manim/default.nix
new file mode 100644
index 0000000000000..09f2953c362e4
--- /dev/null
+++ b/pkgs/development/python-modules/manim/default.nix
@@ -0,0 +1,175 @@
+{ lib
+, buildPythonPackage
+, fetchFromGitHub
+, poetry-core
+, pytest-xdist
+, pytestCheckHook
+, pythonOlder
+, pythonRelaxDepsHook
+
+, cairo
+, ffmpeg
+, texliveInfraOnly
+
+, click
+, click-default-group
+, cloup
+, colour
+, grpcio
+, grpcio-tools
+, importlib-metadata
+, isosurfaces
+, jupyterlab
+, manimpango
+, mapbox-earcut
+, moderngl
+, moderngl-window
+, networkx
+, numpy
+, pillow
+, pycairo
+, pydub
+, pygments
+, rich
+, scipy
+, screeninfo
+, skia-pathops
+, srt
+, svgelements
+, tqdm
+, watchdog
+}:
+
+let
+  # According to ManimCommunity documentation manim uses tex-packages packaged
+  # in a custom distribution called "manim-latex",
+  #
+  #   https://community.chocolatey.org/packages/manim-latex#files
+  #
+  # which includes another cutom distribution called tinytex, for which the
+  # package list can be found at
+  #
+  #   https://github.com/yihui/tinytex/blob/master/tools/pkgs-custom.txt
+  #
+  # these two combined add up to:
+  manim-tinytex = texliveInfraOnly.withPackages (ps: with ps; [
+
+    # tinytex
+    amsfonts amsmath atbegshi atveryend auxhook babel bibtex
+    bigintcalc bitset booktabs cm dehyph dvipdfmx dvips ec epstopdf-pkg etex
+    etexcmds etoolbox euenc everyshi fancyvrb filehook firstaid float fontspec
+    framed geometry gettitlestring glyphlist graphics graphics-cfg graphics-def
+    grffile helvetic hycolor hyperref hyph-utf8 iftex inconsolata infwarerr
+    intcalc knuth-lib kvdefinekeys kvoptions kvsetkeys l3backend l3kernel
+    l3packages latex latex-amsmath-dev latex-bin latex-fonts latex-tools-dev
+    latexconfig latexmk letltxmacro lm lm-math ltxcmds lua-alt-getopt luahbtex
+    lualatex-math lualibs luaotfload luatex mdwtools metafont mfware natbib
+    pdfescape pdftex pdftexcmds plain psnfss refcount rerunfilecheck stringenc
+    tex tex-ini-files times tipa tools unicode-data unicode-math uniquecounter
+    url xcolor xetex xetexconfig xkeyval xunicode zapfding
+
+    # manim-latex
+    standalone everysel preview doublestroke ms setspace rsfs relsize ragged2e
+    fundus-calligra microtype wasysym physics dvisvgm jknapltx wasy cm-super
+    babel-english gnu-freefont mathastext cbfonts-fd
+  ]);
+
+in buildPythonPackage rec {
+  pname = "manim";
+  pyproject = true;
+  version = "0.18.1";
+  disabled = pythonOlder "3.9";
+
+  src = fetchFromGitHub {
+    owner  = "ManimCommunity";
+    repo = "manim";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-o+Wl3NMK6yopcsRVFtZuUE9c1GABa5d8rbQNHDJ4OiQ=";
+  };
+
+  nativeBuildInputs = [
+    poetry-core
+    pythonRelaxDepsHook
+  ];
+
+  pythonRelaxDeps = [
+    "cloup"
+    "isosurfaces"
+    "pillow"
+    "skia-pathops"
+    "watchdog"
+  ];
+
+  patches = [
+    ./pytest-report-header.patch
+  ];
+
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace "--no-cov-on-fail --cov=manim --cov-report xml --cov-report term" ""
+  '';
+
+  buildInputs = [ cairo ];
+
+  propagatedBuildInputs = [
+    click
+    click-default-group
+    cloup
+    colour
+    grpcio
+    grpcio-tools
+    importlib-metadata
+    isosurfaces
+    jupyterlab
+    manimpango
+    mapbox-earcut
+    moderngl
+    moderngl-window
+    networkx
+    numpy
+    pillow
+    pycairo
+    pydub
+    pygments
+    rich
+    scipy
+    screeninfo
+    skia-pathops
+    srt
+    svgelements
+    tqdm
+    watchdog
+  ];
+
+  makeWrapperArgs = [
+    "--prefix" "PATH" ":" (lib.makeBinPath [
+      ffmpeg
+      manim-tinytex
+    ])
+  ];
+
+  nativeCheckInputs = [
+    ffmpeg
+    manim-tinytex
+    pytest-xdist
+    pytestCheckHook
+  ];
+
+  # about 55 of ~600 tests failing mostly due to demand for display
+  disabledTests = import ./failing_tests.nix;
+
+  pythonImportsCheck = [ "manim" ];
+
+  meta = with lib; {
+    description = "Animation engine for explanatory math videos - Community version";
+    longDescription = ''
+      Manim is an animation engine for explanatory math videos. It's used to
+      create precise animations programmatically, as seen in the videos of
+      3Blue1Brown on YouTube. This is the community maintained version of
+      manim.
+    '';
+    homepage = "https://github.com/ManimCommunity/manim";
+    license = licenses.mit;
+    maintainers = with maintainers; [ friedelino ];
+  };
+}
diff --git a/pkgs/development/python-modules/manim/failing_tests.nix b/pkgs/development/python-modules/manim/failing_tests.nix
new file mode 100644
index 0000000000000..ac788c25be20c
--- /dev/null
+++ b/pkgs/development/python-modules/manim/failing_tests.nix
@@ -0,0 +1,92 @@
+[
+  # reason for failure: tests try to open display
+  "test_background_color"
+  "test_scene_add_remove"
+  "test_Circle"
+  "test_wait_skip"
+  "test_basic_scene_with_default_values"
+  "test_dry_run_with_png_format"
+  "test_dry_run_with_png_format_skipped_animations"
+  "test_FixedMobjects3D"
+  "test_basic_scene_l_flag"
+  "test_n_flag"
+  "test_s_flag_opengl_renderer"
+  "test_s_flag_no_animations"
+  "test_image_output_for_static_scene"
+  "test_no_image_output_with_interactive_embed"
+  "test_no_default_image_output_with_non_static_scene"
+  "test_image_output_for_static_scene_with_write_to_movie"
+  "test_s_flag"
+  "test_r_flag"
+  "test_play_skip"
+  "test_write_to_movie_disables_window"
+  "test_a_flag"
+  "test_pixel_coords_to_space_coords"
+  "test_t_values"
+  "test_custom_folders"
+  "test_t_values[15]"
+  "test_t_values[30]"
+  "test_t_values[60]"
+  "test_dash_as_filename"
+  "test_images_are_created_when_png_format_set_for_opengl"
+  "test_t_values_with_skip_animations"
+  "test_static_wait_detection"
+  "test_non_static_wait_detection"
+  "test_frozen_frame"
+  "test_gif_format_output"
+  "test_animate_with_changed_custom_attribute"
+  "test_images_are_zero_padded_when_zero_pad_set_for_opengl"
+  "test_mp4_format_output"
+  "test_videos_not_created_when_png_format_set"
+  "test_images_are_created_when_png_format_set"
+  "test_images_are_zero_padded_when_zero_pad_set"
+  "test_webm_format_output"
+  "test_default_format_output_for_transparent_flag"
+  "test_mov_can_be_set_as_output_format"
+  "test_force_window_opengl_render_with_format"
+  "test_get_frame_with_preview_disabled"
+  "test_get_frame_with_preview_enabled"
+
+  # reason for failure: tests try to reach network
+  "test_logging_to_file"
+  "test_plugin_function_like"
+  "test_plugin_no_all"
+  "test_plugin_with_all"
+
+  # failing with:
+  # E           AssertionError:
+  # E           Not equal to tolerance rtol=1e-07, atol=1.01
+  # E           Frame no -1. You can use --show_diff to visually show the difference.
+  # E           Mismatched elements: 18525 / 1639680 (1.13%)
+  # E           Max absolute difference: 255
+  # E           Max relative difference: 255.
+  "test_Text2Color"
+  "test_PointCloudDot"
+  "test_Torus"
+
+  # test_ImplicitFunction[/test_implicit_graph] failing with:
+  # E           AssertionError:
+  # E           Not equal to tolerance rtol=1e-07, atol=1.01
+  # E           Frame no -1. You can use --show_diff to visually show the difference.
+  # E           Mismatched elements: 1185[/633] / 1639680[/1639680] (0.0723[/0.0386]%)
+  # E           Max absolute difference: 125[/121]
+  # E           Max relative difference: 6.5[/1]
+  #
+  # These started failing after relaxing the “watchdog” and “isosurfaces” dependencies,
+  # likely due to a tolerance difference.  They should, however, start working again when [1] is
+  # included in a Manim release.
+  # [1]: https://github.com/ManimCommunity/manim/pull/3376
+  "test_ImplicitFunction"
+  "test_implicit_graph"
+
+  # failing with:
+  # TypeError: __init__() got an unexpected keyword argument 'msg' - maybe you meant pytest.mark.skipif?
+  "test_force_window_opengl_render_with_movies"
+
+  # mismatching expecation on the new commandline
+  "test_manim_new_command"
+
+  # This tests checks if the manim executable is a python script. In our case it is not.
+  # It is a wrapper shell script instead.
+  "test_manim_checkhealth_subcommand"
+]
diff --git a/pkgs/development/python-modules/manim/pytest-report-header.patch b/pkgs/development/python-modules/manim/pytest-report-header.patch
new file mode 100644
index 0000000000000..7aa87d373e508
--- /dev/null
+++ b/pkgs/development/python-modules/manim/pytest-report-header.patch
@@ -0,0 +1,22 @@
+diff --git a/conftest.py b/conftest.py
+index dacb730a..149c6702 100644
+--- a/conftest.py
++++ b/conftest.py
+@@ -33,17 +33,3 @@ def temp_media_dir(tmpdir, monkeypatch, request):
+         with tempconfig({"media_dir": str(tmpdir)}):
+             assert config.media_dir == str(tmpdir)
+             yield tmpdir
+-
+-
+-def pytest_report_header(config):
+-    ctx = moderngl.create_standalone_context()
+-    info = ctx.info
+-    ctx.release()
+-    return (
+-        f"\nCairo Version: {cairo.cairo_version()}",
+-        "\nOpenGL information",
+-        "------------------",
+-        f"vendor: {info['GL_VENDOR'].strip()}",
+-        f"renderer: {info['GL_RENDERER'].strip()}",
+-        f"version: {info['GL_VERSION'].strip()}\n",
+-    )
diff --git a/pkgs/development/python-modules/mashumaro/default.nix b/pkgs/development/python-modules/mashumaro/default.nix
index 6cfa517cc386a..cf79f268ffb37 100644
--- a/pkgs/development/python-modules/mashumaro/default.nix
+++ b/pkgs/development/python-modules/mashumaro/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "mashumaro";
-  version = "3.12";
+  version = "3.13";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "Fatal1ty";
     repo = "mashumaro";
     rev = "refs/tags/v${version}";
-    hash = "sha256-sSwj/8j+vPX7M8l2h4bPs8WnjzIN2WIpyd7/NcGaExg=";
+    hash = "sha256-ETK1rHKlByQkqibejiZmXF6c4eIiMazLa8XY2OH30q4=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/mkdocstrings/default.nix b/pkgs/development/python-modules/mkdocstrings/default.nix
index a8dc02b4a980c..f82916c3a784d 100644
--- a/pkgs/development/python-modules/mkdocstrings/default.nix
+++ b/pkgs/development/python-modules/mkdocstrings/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "mkdocstrings";
-  version = "0.24.3";
+  version = "0.25.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "mkdocstrings";
     repo = "mkdocstrings";
     rev = "refs/tags/${version}";
-    hash = "sha256-L3QQ2ll2sDbQwrmw88iwTW6WS2SNsiMR2TvuV4P1uj4=";
+    hash = "sha256-VKjK58KK9x5RCc7VVy46zax42ySCv2NzqAat+XF+3a8=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/numba-scipy/default.nix b/pkgs/development/python-modules/numba-scipy/default.nix
index c4c37b7ad3333..22e3db22f3023 100644
--- a/pkgs/development/python-modules/numba-scipy/default.nix
+++ b/pkgs/development/python-modules/numba-scipy/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "numba-scipy";
-  version = "0.3.1";
+  version = "0.4.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-cApTGH5GJZH/RbkRjKhL3injvixD5kvfaS49FjrPA2U=";
+    hash = "sha256-RDZF1mNcZnrcOzjQpjbZq8yXHnjeLAeAjYmvzXvFhEQ=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pdoc/default.nix b/pkgs/development/python-modules/pdoc/default.nix
index d1356c9a9940c..c6ebbc72f5ce1 100644
--- a/pkgs/development/python-modules/pdoc/default.nix
+++ b/pkgs/development/python-modules/pdoc/default.nix
@@ -30,7 +30,7 @@ buildPythonPackage rec {
     setuptools
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     jinja2
     pygments
     markupsafe
diff --git a/pkgs/development/python-modules/pipdeptree/default.nix b/pkgs/development/python-modules/pipdeptree/default.nix
index f42041f1a56f0..8dad1316c1a7f 100644
--- a/pkgs/development/python-modules/pipdeptree/default.nix
+++ b/pkgs/development/python-modules/pipdeptree/default.nix
@@ -1,20 +1,21 @@
-{ lib
-, buildPythonPackage
-, fetchFromGitHub
-, pythonOlder
-, diff-cover
-, graphviz
-, hatchling
-, hatch-vcs
-, pytest-mock
-, pytestCheckHook
-, pip
-, virtualenv
+{
+  lib,
+  buildPythonPackage,
+  fetchFromGitHub,
+  pythonOlder,
+  diff-cover,
+  graphviz,
+  hatchling,
+  hatch-vcs,
+  pytest-mock,
+  pytestCheckHook,
+  pip,
+  virtualenv,
 }:
 
 buildPythonPackage rec {
   pname = "pipdeptree";
-  version = "2.18.1";
+  version = "2.19.1";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -23,7 +24,7 @@ buildPythonPackage rec {
     owner = "tox-dev";
     repo = "pipdeptree";
     rev = "refs/tags/${version}";
-    hash = "sha256-fzxshqh2QurpbilG0gC3NWnUntTRoxOHPpfpg6bPI98=";
+    hash = "sha256-kXRz78UHQtVyHFFnURSjOOXX8Me2I5tG2bX+u2yGyzY=";
   };
 
   build-system = [
@@ -31,14 +32,10 @@ buildPythonPackage rec {
     hatch-vcs
   ];
 
-  dependencies = [
-    pip
-  ];
+  dependencies = [ pip ];
 
   passthru.optional-dependencies = {
-    graphviz = [
-      graphviz
-    ];
+    graphviz = [ graphviz ];
   };
 
   nativeCheckInputs = [
@@ -48,9 +45,7 @@ buildPythonPackage rec {
     virtualenv
   ] ++ lib.flatten (builtins.attrValues passthru.optional-dependencies);
 
-  pythonImportsCheck = [
-    "pipdeptree"
-  ];
+  pythonImportsCheck = [ "pipdeptree" ];
 
   disabledTests = [
     # Don't run console tests
@@ -59,10 +54,10 @@ buildPythonPackage rec {
 
   meta = with lib; {
     description = "Command line utility to show dependency tree of packages";
-    mainProgram = "pipdeptree";
     homepage = "https://github.com/tox-dev/pipdeptree";
     changelog = "https://github.com/tox-dev/pipdeptree/releases/tag/${version}";
     license = licenses.mit;
     maintainers = with maintainers; [ charlesbaynham ];
+    mainProgram = "pipdeptree";
   };
 }
diff --git a/pkgs/development/python-modules/pydrawise/default.nix b/pkgs/development/python-modules/pydrawise/default.nix
index 18752af1e057a..6d1f6aff06bf6 100644
--- a/pkgs/development/python-modules/pydrawise/default.nix
+++ b/pkgs/development/python-modules/pydrawise/default.nix
@@ -18,7 +18,7 @@
 
 buildPythonPackage rec {
   pname = "pydrawise";
-  version = "2024.4.0";
+  version = "2024.4.1";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -27,7 +27,7 @@ buildPythonPackage rec {
     owner = "dknowles2";
     repo = "pydrawise";
     rev = "refs/tags/${version}";
-    hash = "sha256-krePSrMMrMgKDHQSjzH7hSNnRmwyRe0qTDXc0r0+CPU=";
+    hash = "sha256-rJul7UAhgB0a6+3buPlfjnhhy2QOo82gvmRtZB+vrko=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/pygame-ce/default.nix b/pkgs/development/python-modules/pygame-ce/default.nix
new file mode 100644
index 0000000000000..a476ecd58b850
--- /dev/null
+++ b/pkgs/development/python-modules/pygame-ce/default.nix
@@ -0,0 +1,123 @@
+{ stdenv
+, lib
+, substituteAll
+, fetchFromGitHub
+, buildPythonPackage
+, pythonOlder
+, python
+, pkg-config
+, setuptools
+, cython
+
+, AppKit
+, fontconfig
+, freetype
+, libjpeg
+, libpng
+, libX11
+, portmidi
+, SDL2
+, SDL2_image
+, SDL2_mixer
+, SDL2_ttf
+}:
+
+buildPythonPackage rec {
+  pname = "pygame-ce";
+  version = "2.4.1";
+  pyproject = true;
+
+  disabled = pythonOlder "3.6";
+
+  src = fetchFromGitHub {
+    owner = "pygame-community";
+    repo = "pygame-ce";
+    rev = "refs/tags/${version}";
+    hash = "sha256-4Ky+QEUsQ0odcwEETk0yGECs7CcJQthhavboOnMDvF8=";
+    # Unicode file cause different checksums on HFS+ vs. other filesystems
+    postFetch = "rm -rf $out/docs/reST";
+  };
+
+  patches = [
+    (substituteAll {
+      src = ./fix-dependency-finding.patch;
+      buildinputs_include = builtins.toJSON (builtins.concatMap (dep: [
+        "${lib.getDev dep}/"
+        "${lib.getDev dep}/include"
+        "${lib.getDev dep}/include/SDL2"
+      ]) buildInputs);
+      buildinputs_lib = builtins.toJSON (builtins.concatMap (dep: [
+        "${lib.getLib dep}/"
+        "${lib.getLib dep}/lib"
+      ]) buildInputs);
+    })
+    # Skip tests that should be disabled without video driver
+    ./skip-surface-tests.patch
+  ];
+
+  postPatch = ''
+    substituteInPlace buildconfig/config_{unix,darwin}.py \
+      --replace-fail 'from distutils' 'from setuptools._distutils'
+    substituteInPlace src_py/sysfont.py \
+      --replace-fail 'path="fc-list"' 'path="${fontconfig}/bin/fc-list"' \
+      --replace-fail /usr/X11/bin/fc-list ${fontconfig}/bin/fc-list
+  '' + lib.optionalString stdenv.isDarwin ''
+    # flaky
+    rm test/system_test.py
+  '';
+
+  nativeBuildInputs = [
+    pkg-config
+    cython
+    setuptools
+  ];
+
+  buildInputs = [
+    freetype
+    libX11
+    libjpeg
+    libpng
+    portmidi
+    SDL2
+    SDL2_image
+    SDL2_mixer
+    SDL2_ttf
+  ] ++ lib.optionals stdenv.isDarwin [
+    AppKit
+  ];
+
+  preConfigure = ''
+    ${python.pythonOnBuildForHost.interpreter} buildconfig/config.py
+  '';
+
+  env = {
+    SDL_CONFIG = "${SDL2.dev}/bin/sdl2-config";
+  } // lib.optionalAttrs stdenv.cc.isClang {
+    NIX_CFLAGS_COMPILE = "-Wno-error=incompatible-function-pointer-types";
+  };
+
+  preCheck = ''
+    export HOME=$(mktemp -d)
+    # No audio or video device in test environment
+    export SDL_VIDEODRIVER=dummy
+    export SDL_AUDIODRIVER=disk
+  '';
+
+  checkPhase = ''
+    runHook preCheck
+    ${python.interpreter} -m pygame.tests -v --exclude opengl,timing --time_out 300
+    runHook postCheck
+  '';
+
+  pythonImportsCheck = [
+    "pygame"
+  ];
+
+  meta = with lib; {
+    description = "Pygame Community Edition (CE) - library for multimedia application built on SDL";
+    homepage = "https://pyga.me/";
+    license = licenses.lgpl21Plus;
+    maintainers = with maintainers; [ pbsds ];
+    platforms = platforms.unix;
+  };
+}
diff --git a/pkgs/development/python-modules/pygame-ce/fix-dependency-finding.patch b/pkgs/development/python-modules/pygame-ce/fix-dependency-finding.patch
new file mode 100644
index 0000000000000..5e39dff135752
--- /dev/null
+++ b/pkgs/development/python-modules/pygame-ce/fix-dependency-finding.patch
@@ -0,0 +1,41 @@
+diff --git a/buildconfig/config_darwin.py b/buildconfig/config_darwin.py
+index 9503ea70..d0d3ab6e 100644
+--- a/buildconfig/config_darwin.py
++++ b/buildconfig/config_darwin.py
+@@ -140,16 +140,8 @@ def main(auto_config=False):
+     ])
+ 
+     print('Hunting dependencies...')
+-    incdirs = ['/usr/local/include', '/opt/homebrew/include']
+-    incdirs.extend(['/usr/local/include/SDL2', '/opt/homebrew/include/SDL2', '/opt/local/include/SDL2'])
+-
+-    incdirs.extend([
+-       #'/usr/X11/include',
+-       '/opt/local/include',
+-       '/opt/local/include/freetype2/freetype']
+-    )
+-    #libdirs = ['/usr/local/lib', '/usr/X11/lib', '/opt/local/lib']
+-    libdirs = ['/usr/local/lib', '/opt/local/lib', '/opt/homebrew/lib']
++    incdirs = @buildinputs_include@
++    libdirs = @buildinputs_lib@
+ 
+     for d in DEPS:
+         if isinstance(d, (list, tuple)):
+diff --git a/buildconfig/config_unix.py b/buildconfig/config_unix.py
+index 3eba5b5c..53cc6233 100644
+--- a/buildconfig/config_unix.py
++++ b/buildconfig/config_unix.py
+@@ -240,11 +240,8 @@ def main(auto_config=False):
+     if not DEPS[0].found:
+         raise RuntimeError('Unable to run "sdl-config". Please make sure a development version of SDL is installed.')
+ 
+-    incdirs = []
+-    libdirs = []
+-    for extrabase in extrabases:
+-        incdirs += [extrabase + d for d in origincdirs]
+-        libdirs += [extrabase + d for d in origlibdirs]
++    incdirs = @buildinputs_include@
++    libdirs = @buildinputs_lib@
+ 
+     for arg in DEPS[0].cflags.split():
+         if arg[:2] == '-I':
diff --git a/pkgs/development/python-modules/pygame-ce/skip-surface-tests.patch b/pkgs/development/python-modules/pygame-ce/skip-surface-tests.patch
new file mode 100644
index 0000000000000..21d9c9060f3b8
--- /dev/null
+++ b/pkgs/development/python-modules/pygame-ce/skip-surface-tests.patch
@@ -0,0 +1,26 @@
+diff --git a/test/surface_test.py b/test/surface_test.py
+index 5ce78b6e..8b8f7ed5 100644
+--- a/test/surface_test.py
++++ b/test/surface_test.py
+@@ -1091,6 +1091,10 @@ class GeneralSurfaceTests(unittest.TestCase):
+         finally:
+             pygame.display.quit()
+ 
++    @unittest.skipIf(
++        os.environ.get("SDL_VIDEODRIVER") == "dummy",
++        'requires a non-"dummy" SDL_VIDEODRIVER',
++    )
+     def test_convert_init(self):
+         """Ensure initialization exceptions are raised
+         for surf.convert()."""
+@@ -1118,6 +1122,10 @@ class GeneralSurfaceTests(unittest.TestCase):
+         finally:
+             pygame.display.quit()
+ 
++    @unittest.skipIf(
++        os.environ.get("SDL_VIDEODRIVER") == "dummy",
++        'requires a non-"dummy" SDL_VIDEODRIVER',
++    )
+     def test_convert_alpha_init(self):
+         """Ensure initialization exceptions are raised
+         for surf.convert_alpha()."""
diff --git a/pkgs/development/python-modules/pymc/default.nix b/pkgs/development/python-modules/pymc/default.nix
index e3f64840a0737..947aaa4241861 100644
--- a/pkgs/development/python-modules/pymc/default.nix
+++ b/pkgs/development/python-modules/pymc/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "pymc";
-  version = "5.13.1";
+  version = "5.14.0";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -25,7 +25,7 @@ buildPythonPackage rec {
     owner = "pymc-devs";
     repo = "pymc";
     rev = "refs/tags/v${version}";
-    hash = "sha256-SSAn7nbKhXGeEvASKQITUs3+ix3j37u9JTkNiG+1tZ0=";
+    hash = "sha256-ZVGMzkStKSPLgBoyzA8SOvsof7QRR7TLmLhh5NmD/F8=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/pymongo-inmemory/default.nix b/pkgs/development/python-modules/pymongo-inmemory/default.nix
index 604f0c1c3cd32..6447b0a7ffe94 100644
--- a/pkgs/development/python-modules/pymongo-inmemory/default.nix
+++ b/pkgs/development/python-modules/pymongo-inmemory/default.nix
@@ -25,13 +25,13 @@ buildPythonPackage rec {
   postPatch = ''
     # move cache location from nix store to home
     substituteInPlace pymongo_inmemory/context.py \
-      --replace \
+      --replace-fail \
         'CACHE_FOLDER = path.join(path.dirname(__file__), "..", ".cache")' \
         'CACHE_FOLDER = os.environ.get("XDG_CACHE_HOME", os.environ["HOME"] + "/.cache") + "/pymongo-inmemory"'
 
     # fix a broken assumption arising from the above fix
     substituteInPlace pymongo_inmemory/_utils.py \
-      --replace \
+      --replace-fail \
         'os.mkdir(current_path)' \
         'os.makedirs(current_path)'
   '';
@@ -40,7 +40,7 @@ buildPythonPackage rec {
     poetry-core
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     pymongo
   ];
 
diff --git a/pkgs/development/python-modules/pyrender/default.nix b/pkgs/development/python-modules/pyrender/default.nix
index eb1d5d17ee47b..41214174ae789 100644
--- a/pkgs/development/python-modules/pyrender/default.nix
+++ b/pkgs/development/python-modules/pyrender/default.nix
@@ -3,6 +3,7 @@
 , pythonOlder
 , fetchFromGitHub
 , fetchpatch
+, setuptools
 , freetype-py
 , imageio
 , networkx
@@ -19,7 +20,7 @@
 buildPythonPackage rec {
   pname = "pyrender";
   version = "0.1.45";
-  format = "setuptools";
+  pyproject = true;
 
   disabled = pythonOlder "3.5";
 
@@ -45,12 +46,16 @@ buildPythonPackage rec {
   # the commit does not apply as a patch when cherry picked, hence the substituteInPlace
   postPatch = ''
     substituteInPlace tests/unit/test_meshes.py \
-      --replace \
+      --replace-fail \
         "bm = trimesh.load('tests/data/WaterBottle.glb').dump()[0]" \
         'bm = trimesh.load("tests/data/WaterBottle.glb").geometry["WaterBottle"]'
   '';
 
-  propagatedBuildInputs = [
+  nativeBuildInputs = [
+    setuptools
+  ];
+
+  dependencies = [
     freetype-py
     imageio
     networkx
diff --git a/pkgs/development/python-modules/pytensor/default.nix b/pkgs/development/python-modules/pytensor/default.nix
index 5b281130f309a..5d997cab00444 100644
--- a/pkgs/development/python-modules/pytensor/default.nix
+++ b/pkgs/development/python-modules/pytensor/default.nix
@@ -60,7 +60,6 @@ buildPythonPackage rec {
     jax
     jaxlib
     numba
-    numba-scipy
     pytest-mock
     pytestCheckHook
     tensorflow-probability
diff --git a/pkgs/development/python-modules/pytikz-allefeld/default.nix b/pkgs/development/python-modules/pytikz-allefeld/default.nix
index fe59dc0a5208c..9dd0bdb2bbe6b 100644
--- a/pkgs/development/python-modules/pytikz-allefeld/default.nix
+++ b/pkgs/development/python-modules/pytikz-allefeld/default.nix
@@ -3,6 +3,7 @@
 , fetchFromGitHub
 , buildPythonPackage
 , pythonOlder
+, setuptools
 , pymupdf
 , numpy
 , ipython
@@ -12,7 +13,7 @@
 buildPythonPackage rec {
   pname = "pytikz-allefeld"; # "pytikz" on pypi is a different module
   version = "unstable-2022-11-01";
-  format = "setuptools";
+  pyproject = true;
 
   disabled = pythonOlder "3.5";
 
@@ -23,7 +24,11 @@ buildPythonPackage rec {
     hash = "sha256-G59UUkpjttJKNBN0MB/A9CftO8tO3nv8qlTxt3/fKHk=";
   };
 
-  propagatedBuildInputs = [
+  nativeBuildInputs = [
+    setuptools
+  ];
+
+  dependencies = [
     pymupdf
     numpy
     ipython
diff --git a/pkgs/development/python-modules/pyunpack/default.nix b/pkgs/development/python-modules/pyunpack/default.nix
index ea7ad7d416a3a..631c9706f0df0 100644
--- a/pkgs/development/python-modules/pyunpack/default.nix
+++ b/pkgs/development/python-modules/pyunpack/default.nix
@@ -23,14 +23,14 @@ buildPythonPackage rec {
 
   postPatch = ''
     substituteInPlace pyunpack/__init__.py \
-      --replace \
+      --replace-fail \
        '_exepath("patool")' \
        '"${lib.getBin patool}/bin/.patool-wrapped"'
   '';
 
   nativeBuildInputs = [ setuptools ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     easyprocess
     entrypoint2
   ];
diff --git a/pkgs/development/python-modules/pyvis/default.nix b/pkgs/development/python-modules/pyvis/default.nix
index a9fea2dc68303..cb39d67192c9f 100644
--- a/pkgs/development/python-modules/pyvis/default.nix
+++ b/pkgs/development/python-modules/pyvis/default.nix
@@ -2,6 +2,7 @@
 , fetchFromGitHub
 , fetchpatch
 , buildPythonPackage
+, setuptools
 , networkx
 , jinja2
 , ipython
@@ -13,7 +14,7 @@
 buildPythonPackage rec {
   pname = "pyvis";
   version = "0.3.2";
-  format = "setuptools";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "WestHealth";
@@ -22,7 +23,11 @@ buildPythonPackage rec {
     hash = "sha256-eo9Mk2c0hrBarCrzwmkXha3Qt4Bl1qR7Lhl9EkUx96E=";
   };
 
-  propagatedBuildInputs = [
+  nativeBuildInputs = [
+    setuptools
+  ];
+
+  dependencies = [
     jinja2
     networkx
     ipython
diff --git a/pkgs/development/python-modules/remi/default.nix b/pkgs/development/python-modules/remi/default.nix
index b1f28e269099e..64b6a70669743 100644
--- a/pkgs/development/python-modules/remi/default.nix
+++ b/pkgs/development/python-modules/remi/default.nix
@@ -2,6 +2,7 @@
 , lib
 , buildPythonPackage
 , fetchFromGitHub
+, setuptools
 , pytestCheckHook
 , matplotlib
 , python-snap7
@@ -11,7 +12,7 @@
 buildPythonPackage rec {
   pname = "remi";
   version = "2022.7.27";
-  format = "setuptools";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "rawpython";
@@ -23,23 +24,27 @@ buildPythonPackage rec {
   preCheck = ''
     # for some reason, REMI already deal with these using try blocks, but they fail
     substituteInPlace test/test_widget.py \
-      --replace \
+      --replace-fail \
         "from html_validator import " \
         "from .html_validator import "
     substituteInPlace test/test_examples_app.py \
-      --replace \
+      --replace-fail \
         "from mock_server_and_request import " \
         "from .mock_server_and_request import " \
-      --replace \
+      --replace-fail \
         "from html_validator import " \
         "from .html_validator import "
     # Halves number of warnings
     substituteInPlace test/test_*.py \
-      --replace \
+      --replace-quiet \
         "self.assertEquals(" \
         "self.assertEqual("
   '';
 
+  nativeBuildInputs = [
+    setuptools
+  ];
+
   nativeCheckInputs = [
     pytestCheckHook
     python-snap7
diff --git a/pkgs/development/python-modules/rubicon-objc/default.nix b/pkgs/development/python-modules/rubicon-objc/default.nix
new file mode 100644
index 0000000000000..f12f08e0ad47f
--- /dev/null
+++ b/pkgs/development/python-modules/rubicon-objc/default.nix
@@ -0,0 +1,62 @@
+{ lib
+, buildPythonPackage
+, darwin
+, fetchFromGitHub
+, pythonOlder
+, setuptools
+, setuptools-scm
+, unittestCheckHook
+}:
+
+buildPythonPackage rec {
+  pname = "rubicon-objc";
+  version = "0.4.8";
+  pyproject = true;
+
+  disabled = pythonOlder "3.8";
+
+  src = fetchFromGitHub {
+    owner = "beeware";
+    repo = "rubicon-objc";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-aFKzLeVYn5u8hTEgXCum3XpZxI7C/Wql41jkWkCF0HQ=";
+  };
+
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace-fail "setuptools==69.2.0" "setuptools" \
+      --replace-fail "setuptools_scm==8.0.4" "setuptools_scm"
+  '';
+
+  build-system = [
+    setuptools
+    setuptools-scm
+  ];
+
+  preCheck = ''
+    make -C tests/objc
+  '';
+
+  nativeCheckInputs = [
+    unittestCheckHook
+  ];
+
+  checkInputs = [
+    darwin.apple_sdk.frameworks.Foundation
+  ];
+
+  pythonImportsCheck = [
+    "rubicon.objc"
+  ];
+
+  __darwinAllowLocalNetworking = true;
+
+  meta = {
+    description = "A bridge interface between Python and Objective-C";
+    homepage = "https://github.com/beeware/rubicon-objc/";
+    changelog = "https://github.com/beeware/rubicon-objc/releases/tag/v${version}";
+    license = lib.licenses.bsd3;
+    maintainers = with lib.maintainers; [ natsukium ];
+    platforms = lib.platforms.darwin;
+  };
+}
diff --git a/pkgs/development/python-modules/snaptime/default.nix b/pkgs/development/python-modules/snaptime/default.nix
index 8555e3640d559..8f148eba4e68e 100644
--- a/pkgs/development/python-modules/snaptime/default.nix
+++ b/pkgs/development/python-modules/snaptime/default.nix
@@ -1,6 +1,7 @@
 { lib
 , buildPythonPackage
 , fetchPypi
+, setuptools
 , python-dateutil
 , pytz
 }:
@@ -8,14 +9,18 @@
 buildPythonPackage rec {
   pname = "snaptime";
   version = "0.2.4";
-  format = "setuptools";
+  pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
     hash = "sha256-4/HriQQ9WNMHIauYy2UCPxpMJ0DjsZdwQpixY8ktUIs=";
   };
 
-  propagatedBuildInputs = [
+  nativeBuildInputs = [
+    setuptools
+  ];
+
+  dependencies = [
     python-dateutil
     pytz
   ];
diff --git a/pkgs/development/python-modules/sqlglot/default.nix b/pkgs/development/python-modules/sqlglot/default.nix
index 7eb9ee70eca91..c25a2c10bc59e 100644
--- a/pkgs/development/python-modules/sqlglot/default.nix
+++ b/pkgs/development/python-modules/sqlglot/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "sqlglot";
-  version = "21.1.1";
+  version = "23.12.1";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     repo = "sqlglot";
     owner = "tobymao";
     rev = "refs/tags/v${version}";
-    hash = "sha256-xMKDkhotVBkLzn+f9RMGCPfWTF4Rz9a193nSJv5z+iA=";
+    hash = "sha256-VUG/l1iZ/8vAJwhktN/tx8U8KVLgaghUPArtxEyIA54=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/sqlmodel/default.nix b/pkgs/development/python-modules/sqlmodel/default.nix
index 8e657920dfb62..55bf943264de7 100644
--- a/pkgs/development/python-modules/sqlmodel/default.nix
+++ b/pkgs/development/python-modules/sqlmodel/default.nix
@@ -1,19 +1,20 @@
-{ lib
-, buildPythonPackage
-, dirty-equals
-, fastapi
-, fetchFromGitHub
-, poetry-core
-, pydantic
-, pytest-asyncio
-, pytest7CheckHook
-, pythonOlder
-, sqlalchemy
+{
+  lib,
+  buildPythonPackage,
+  dirty-equals,
+  fastapi,
+  fetchFromGitHub,
+  pdm-backend,
+  pydantic,
+  pytest-asyncio,
+  pytest7CheckHook,
+  pythonOlder,
+  sqlalchemy,
 }:
 
 buildPythonPackage rec {
   pname = "sqlmodel";
-  version = "0.0.16";
+  version = "0.0.18";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -22,12 +23,10 @@ buildPythonPackage rec {
     owner = "tiangolo";
     repo = "sqlmodel";
     rev = "refs/tags/${version}";
-    hash = "sha256-hDJcekn0ExYUCs8kBZkJzsWqXsB/cI6RbW3EhRCCioM=";
+    hash = "sha256-2ens+wEFJThccBTBeBy8j1AzKJtebg3dJTGG6+Cpt+Q=";
   };
 
-  build-system = [
-    poetry-core
-  ];
+  build-system = [ pdm-backend ];
 
   dependencies = [
     pydantic
@@ -41,9 +40,7 @@ buildPythonPackage rec {
     pytest7CheckHook
   ];
 
-  pythonImportsCheck = [
-    "sqlmodel"
-  ];
+  pythonImportsCheck = [ "sqlmodel" ];
 
   disabledTests = [
     # AssertionError: assert 'enum_field VARCHAR(1)
diff --git a/pkgs/development/python-modules/strct/default.nix b/pkgs/development/python-modules/strct/default.nix
index 061e2a90c07c8..c5f9bc2f994b4 100644
--- a/pkgs/development/python-modules/strct/default.nix
+++ b/pkgs/development/python-modules/strct/default.nix
@@ -30,13 +30,13 @@ buildPythonPackage rec {
 
   postPatch = ''
     substituteInPlace pytest.ini \
-      --replace  \
+      --replace-fail  \
         "--cov" \
         "#--cov"
 
     # configure correct version, which fails due to missing .git
     substituteInPlace versioneer.py strct/_version.py \
-      --replace '"0+unknown"' '"${version}"'
+      --replace-fail '"0+unknown"' '"${version}"'
   '';
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/total-connect-client/default.nix b/pkgs/development/python-modules/total-connect-client/default.nix
index f6f3baaefe252..e7b85cf199b60 100644
--- a/pkgs/development/python-modules/total-connect-client/default.nix
+++ b/pkgs/development/python-modules/total-connect-client/default.nix
@@ -9,8 +9,8 @@
 
 buildPythonPackage rec {
   pname = "total-connect-client";
-  version = "2023.12.1";
-  format = "pyproject";
+  version = "2024.4";
+  pyproject = true;
 
   disabled = pythonOlder "3.7";
 
@@ -18,14 +18,14 @@ buildPythonPackage rec {
     owner = "craigjmidwinter";
     repo = "total-connect-client";
     rev = "refs/tags/${version}";
-    hash = "sha256-iEQC02KuBWtk8yQwM/fU28ilbmCWeAjilvR6fHVexuI=";
+    hash = "sha256-LuPyhidbAzt/AU5WuXyxggGxjm9yArHsbn6iAaccMEc=";
   };
 
-  nativeBuildInputs = [
+  build-system = [
     setuptools
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     zeep
   ];
 
diff --git a/pkgs/development/python-modules/trimesh/default.nix b/pkgs/development/python-modules/trimesh/default.nix
index abcc25faafdbe..bd3a9f8d762d2 100644
--- a/pkgs/development/python-modules/trimesh/default.nix
+++ b/pkgs/development/python-modules/trimesh/default.nix
@@ -10,19 +10,19 @@
 
 buildPythonPackage rec {
   pname = "trimesh";
-  version = "4.3.1";
+  version = "4.3.2";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-SFD+nZVNb90+UVdWmZwnGEGF21zKhE7mfFPn2HluizE=";
+    hash = "sha256-FFDb0aro3YJe3dVsWn19GzXK1+/Cxj1TXhlWlXfCWRY=";
   };
 
   nativeBuildInputs = [ setuptools ];
 
-  propagatedBuildInputs = [ numpy ];
+  dependencies = [ numpy ];
 
   nativeCheckInputs = [ lxml pytestCheckHook ];
 
diff --git a/pkgs/development/python-modules/uncompyle6/default.nix b/pkgs/development/python-modules/uncompyle6/default.nix
index 9820902a69a4f..fa48931594c9e 100644
--- a/pkgs/development/python-modules/uncompyle6/default.nix
+++ b/pkgs/development/python-modules/uncompyle6/default.nix
@@ -1,7 +1,7 @@
 { lib
 , buildPythonPackage
 , fetchPypi
-, pythonAtLeast
+, pythonOlder
 , spark-parser
 , xdis
 , nose
@@ -12,18 +12,22 @@
 
 buildPythonPackage rec {
   pname = "uncompyle6";
-  version = "3.9.0";
+  version = "3.9.1";
   format = "setuptools";
-  disabled = pythonAtLeast "3.9"; # See: https://github.com/rocky/python-uncompyle6/issues/331
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-HmqQLeYOpcP30q9+J0UAa05Lm97eiIoH+EQcmTjy7n0=";
+    hash = "sha256-xFHDjrPFzINOuLip5uCwzzIm5NlNCP0nbdA/6RWO2yc=";
   };
 
-  nativeCheckInputs = [ nose pytest hypothesis six ];
   propagatedBuildInputs = [ spark-parser xdis ];
 
+  nativeCheckInputs = [ nose pytest hypothesis six ];
+
+  # Tests attempt to decompile bytecode of the python version
+  # that is running the tests - this does not work for versions
+  # above 3.8, but they decompile older bytecode fine
+  doCheck = pythonOlder "3.9";
   # six import errors (yet it is supplied...)
   checkPhase = ''
     runHook preCheck
diff --git a/pkgs/development/python-modules/watchdog-gevent/default.nix b/pkgs/development/python-modules/watchdog-gevent/default.nix
index e1b812b9612f1..fb5951a38ce4d 100644
--- a/pkgs/development/python-modules/watchdog-gevent/default.nix
+++ b/pkgs/development/python-modules/watchdog-gevent/default.nix
@@ -1,25 +1,37 @@
-{ lib
-, buildPythonPackage
-, fetchFromGitHub
-, gevent
-, pytestCheckHook
-, watchdog
+{
+  lib,
+  buildPythonPackage,
+  fetchFromGitHub,
+  fetchpatch,
+  gevent,
+  pytestCheckHook,
+  setuptools,
+  pythonOlder,
+  watchdog,
 }:
 
 buildPythonPackage rec {
   pname = "watchdog-gevent";
   version = "0.1.1";
-  format = "setuptools";
+  pyproject = true;
+
+  disabled = pythonOlder "3.7";
 
-  # Need to fetch from github because tests are not present in pypi
   src = fetchFromGitHub {
     owner = "Bogdanp";
     repo = "watchdog_gevent";
-    rev = "v${version}";
+    rev = "refs/tags/v${version}";
     hash = "sha256-FESm3fNuLmOg2ilI/x8U9LuAimHLnahcTHYzW/nzOVY=";
   };
 
-  propagatedBuildInputs = [ watchdog gevent ];
+  patches = [
+    # Add new event_filter argument to GeventEmitter
+    (fetchpatch {
+      name = "new-event_filter-argument.patch";
+      url = "https://github.com/Bogdanp/watchdog_gevent/commit/a98b6599aefb6f1ea6f9682485ed460c52f6e55f.patch";
+      hash = "sha256-lbUtl8IbnJjlsIpbC+wXLvYB+ZtUuHWqFtf31Bfqc2I=";
+    })
+  ];
 
   postPatch = ''
     sed -i setup.cfg \
@@ -27,6 +39,13 @@ buildPythonPackage rec {
       -e 's:--cov-report html::'
   '';
 
+  build-system = [ setuptools ];
+
+  dependencies = [
+    gevent
+    watchdog
+  ];
+
   nativeCheckInputs = [ pytestCheckHook ];
 
   pythonImportsCheck = [ "watchdog_gevent" ];
diff --git a/pkgs/development/python-modules/whenever/default.nix b/pkgs/development/python-modules/whenever/default.nix
index d36baeefcba30..cb72e8b0aa426 100644
--- a/pkgs/development/python-modules/whenever/default.nix
+++ b/pkgs/development/python-modules/whenever/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "whenever";
-  version = "0.5.1";
+  version = "0.5.2";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     owner = "ariebovenberg";
     repo = "whenever";
     rev = "refs/tags/${version}";
-    hash = "sha256-RH2614M91zYULNTQsr6JoKfxlnGyAJsCkB7oeiz7urs=";
+    hash = "sha256-bG8LV+r5MjA1JwBHWy9/Io4daldAlyEGYNLW+5ITuOw=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/xdis/default.nix b/pkgs/development/python-modules/xdis/default.nix
index 9f5d40248c7c5..5fda8fce96cce 100644
--- a/pkgs/development/python-modules/xdis/default.nix
+++ b/pkgs/development/python-modules/xdis/default.nix
@@ -11,25 +11,18 @@
 
 buildPythonPackage rec {
   pname = "xdis";
-  version = "6.0.5";
+  version = "6.1.0";
   format = "setuptools";
 
-  # No support for Python 3.11, https://github.com/rocky/python-xdis/issues/98
-  disabled = pythonOlder "3.6" || pythonAtLeast "3.11";
+  disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "rocky";
     repo = "python-xdis";
     rev = "refs/tags/${version}";
-    hash = "sha256-3mL0EuPHF/dithovrYvMjweYGwGhrN75N9MRfLjNC34=";
+    hash = "sha256-KgKTO99T2/be1sBs5rY3Oy7/Yl9WGgdG3hqqkZ7D7ZY=";
   };
 
-  postPatch = ''
-    # Our Python release is not in the test matrix
-    substituteInPlace xdis/magics.py \
-      --replace "3.10.4" "3.10.5 3.10.6 3.10.7 3.10.8 3.10.10 3.10.11 3.10.12 3.10.13 3.10.14"
-  '';
-
   propagatedBuildInputs = [
     click
     six
@@ -43,13 +36,16 @@ buildPythonPackage rec {
     "xdis"
   ];
 
-  # import file mismatch:
-  # imported module 'test_disasm' has this __file__ attribute:
-  #   /build/source/pytest/test_disasm.py
-  # which is not the same as the test file we want to collect:
-  #   /build/source/test_unit/test_disasm.py
   disabledTestPaths = [
+    # import file mismatch:
+    # imported module 'test_disasm' has this __file__ attribute:
+    #   /build/source/pytest/test_disasm.py
+    # which is not the same as the test file we want to collect:
+    #   /build/source/test_unit/test_disasm.py
     "test_unit/test_disasm.py"
+
+    # Doesn't run on non-2.7 but has global-level mis-import
+    "test_unit/test_dis27.py"
   ];
 
   disabledTests = [
diff --git a/pkgs/development/tools/bbin/default.nix b/pkgs/development/tools/bbin/default.nix
index 7edce1e48998b..42ef4285816cc 100644
--- a/pkgs/development/tools/bbin/default.nix
+++ b/pkgs/development/tools/bbin/default.nix
@@ -8,13 +8,13 @@
 
 stdenvNoCC.mkDerivation rec {
   pname = "bbin";
-  version = "0.2.1";
+  version = "0.2.3";
 
   src = fetchFromGitHub {
     owner = "babashka";
     repo = "bbin";
     rev = "v${version}";
-    sha256 = "sha256-mF8+Fm1vwLUw5l2PqV+vFFlr6y2JpKBwc+J3PdKQ6Fo=";
+    sha256 = "sha256-tWk5HzDKff+wwqRjLYbjfio3aQC6Xz5vsMf/NLm+Scc=";
   };
 
   nativeBuildInputs = [ makeWrapper ];
diff --git a/pkgs/development/tools/biodiff/default.nix b/pkgs/development/tools/biodiff/default.nix
index 819cccf95c616..adbb69f486e8c 100644
--- a/pkgs/development/tools/biodiff/default.nix
+++ b/pkgs/development/tools/biodiff/default.nix
@@ -1,17 +1,24 @@
-{ lib, fetchFromGitHub, rustPlatform }:
+{ lib, fetchFromGitHub, rustPlatform, wfa2-lib }:
 
 rustPlatform.buildRustPackage rec {
   pname = "biodiff";
-  version = "1.1.0";
+  version = "1.2.1";
 
   src = fetchFromGitHub {
     owner = "8051Enthusiast";
     repo = "biodiff";
     rev = "v${version}";
-    hash = "sha256-IrIRBozW2nNqt3/643jQ9sHT/YIpYhWeG749bTR4+60=";
+    hash = "sha256-ZLxjOV08sC5dKICvRUyL6FLMORkxwdLgNq7L45CDwa4=";
+    fetchSubmodules = true;
   };
 
-  cargoHash = "sha256-EkvZk5l2Jw/6Ejrz4gYFWz9IZLjz0Op/1z3BGBV07dA=";
+  cargoHash = "sha256-LxkwhOxXkegdXLmtbNLIB6nOAeCbpvIwSXbTF6jBcHs=";
+
+  buildInputs = [ wfa2-lib ];
+
+  # default statically links wfa2
+  buildNoDefaultFeatures = true;
+  buildFeatures = [ "wfa2" ];
 
   meta = with lib; {
     description = "Hex diff viewer using alignment algorithms from biology";
diff --git a/pkgs/development/tools/continuous-integration/drone/default.nix b/pkgs/development/tools/continuous-integration/drone/default.nix
index 1c85e501e6b0b..e6f6b8bf4c45c 100644
--- a/pkgs/development/tools/continuous-integration/drone/default.nix
+++ b/pkgs/development/tools/continuous-integration/drone/default.nix
@@ -6,13 +6,13 @@
 
 buildGoModule rec {
   pname = "drone.io${lib.optionalString (!enableUnfree) "-oss"}";
-  version = "2.22.0";
+  version = "2.23.0";
 
   src = fetchFromGitHub {
     owner = "harness";
     repo = "drone";
     rev = "v${version}";
-    sha256 = "sha256-haxxILbM3REdSK4h4LN+HhRvl3VK9Ozf2NfnLTL5T3A=";
+    sha256 = "sha256-HkyR2h7dgbEhqexJXyGebP3zkoTLlzuY+1O2pidAveQ=";
   };
 
   vendorHash = "sha256-n4KbKkqAnHDIsXs8A/FE+rCkSKQKr5fv7npJ/X6t0mk=";
diff --git a/pkgs/development/tools/continuous-integration/github-runner/default.nix b/pkgs/development/tools/continuous-integration/github-runner/default.nix
index 34aaf68bb0ff3..f219438d134dc 100644
--- a/pkgs/development/tools/continuous-integration/github-runner/default.nix
+++ b/pkgs/development/tools/continuous-integration/github-runner/default.nix
@@ -22,13 +22,13 @@ assert builtins.all (x: builtins.elem x [ "node20" ]) nodeRuntimes;
 
 buildDotnetModule rec {
   pname = "github-runner";
-  version = "2.315.0";
+  version = "2.316.0";
 
   src = fetchFromGitHub {
     owner = "actions";
     repo = "runner";
     rev = "v${version}";
-    hash = "sha256-kKfwLZYV4uEkHt82YWNtDehbspgnH8heckVU5aA/YiY=";
+    hash = "sha256-LoXVe4ZuVIFoqz+N8WK950Wm8zssCoKVj6HSkPvDFYU=";
     leaveDotGit = true;
     postFetch = ''
       git -C $out rev-parse --short HEAD > $out/.git-revision
diff --git a/pkgs/development/tools/continuous-integration/gitlab-runner/default.nix b/pkgs/development/tools/continuous-integration/gitlab-runner/default.nix
index 04d9db9de714a..999a2ce7719b3 100644
--- a/pkgs/development/tools/continuous-integration/gitlab-runner/default.nix
+++ b/pkgs/development/tools/continuous-integration/gitlab-runner/default.nix
@@ -1,7 +1,7 @@
 { lib, buildGoModule, fetchFromGitLab, fetchurl, bash }:
 
 let
-  version = "16.10.0";
+  version = "16.11.0";
 in
 buildGoModule rec {
   inherit version;
@@ -17,13 +17,13 @@ buildGoModule rec {
   # For patchShebangs
   buildInputs = [ bash ];
 
-  vendorHash = "sha256-ng3ea60qK98nKGmwlSN2hPiE4BF64cgxEYPSeAoeOh0=";
+  vendorHash = "sha256-98ixme01PHbuyCJatWErbzTeuKYSbXsLbZxNGSd+zjY=";
 
   src = fetchFromGitLab {
     owner = "gitlab-org";
     repo = "gitlab-runner";
     rev = "v${version}";
-    sha256 = "sha256-TN8T/iib7G1NjyHZzZw686KZ3RCwpA1xRli3/0fnLBI=";
+    sha256 = "sha256-cPY+JAvyRb4+ytx5nwx1BaH/tZ5BW4kgWIEvD6a3aec=";
   };
 
   patches = [
diff --git a/pkgs/development/tools/devbox/default.nix b/pkgs/development/tools/devbox/default.nix
index fad90ae480f8b..31dcb4b06efa5 100644
--- a/pkgs/development/tools/devbox/default.nix
+++ b/pkgs/development/tools/devbox/default.nix
@@ -5,13 +5,13 @@
 }:
 buildGoModule rec {
   pname = "devbox";
-  version = "0.10.5";
+  version = "0.10.6";
 
   src = fetchFromGitHub {
     owner = "jetpack-io";
     repo = pname;
     rev = version;
-    hash = "sha256-0Dk3f38kj4bSTffFVhMNwuQXmty7vZMAieKDmkH945Y=";
+    hash = "sha256-E2kJiWuHY+rHyAR6p/NVbONys8RonpxvDHUTrx6ZSkk=";
   };
 
   ldflags = [
@@ -23,7 +23,7 @@ buildGoModule rec {
   # integration tests want file system access
   doCheck = false;
 
-  vendorHash = "sha256-WT30up/1Y2ar0pkHOq1s0Sz7qc4b+Yr6gILzDYDo0Uk=";
+  vendorHash = "sha256-bSCgjSXdPOWgftlInl3MailtiXslLH/TZw95FiEnCxQ=";
 
   nativeBuildInputs = [ installShellFiles ];
 
diff --git a/pkgs/development/tools/glade/default.nix b/pkgs/development/tools/glade/default.nix
index 97e1cea9c6cd4..da3dee87d2212 100644
--- a/pkgs/development/tools/glade/default.nix
+++ b/pkgs/development/tools/glade/default.nix
@@ -76,7 +76,7 @@ stdenv.mkDerivation rec {
   };
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Apps/Glade";
+    homepage = "https://gitlab.gnome.org/GNOME/glade";
     description = "User interface designer for GTK applications";
     maintainers = teams.gnome.members;
     license = licenses.lgpl2;
diff --git a/pkgs/development/tools/gnome-desktop-testing/default.nix b/pkgs/development/tools/gnome-desktop-testing/default.nix
index 51f6eae6f3413..1ff42a6f6241b 100644
--- a/pkgs/development/tools/gnome-desktop-testing/default.nix
+++ b/pkgs/development/tools/gnome-desktop-testing/default.nix
@@ -38,7 +38,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "GNOME test runner for installed tests";
-    homepage = "https://wiki.gnome.org/Initiatives/GnomeGoals/InstalledTests";
+    homepage = "https://gitlab.gnome.org/GNOME/gnome-desktop-testing";
     license = licenses.lgpl2Plus;
     platforms = platforms.linux;
     maintainers = [ maintainers.jtojnar ];
diff --git a/pkgs/development/tools/go-migrate/default.nix b/pkgs/development/tools/go-migrate/default.nix
index e9d907c6f86d9..f459fe371c746 100644
--- a/pkgs/development/tools/go-migrate/default.nix
+++ b/pkgs/development/tools/go-migrate/default.nix
@@ -16,7 +16,7 @@ buildGoModule rec {
 
   subPackages = [ "cmd/migrate" ];
 
-  tags = [ "cassandra" "clickhouse" "cockroachdb" "crate" "firebird" "mongodb" "multistmt" "mysql" "neo4j" "pgx" "postgres" "ql" "redshift" "rqlite" "shell" "snowflake" "spanner" "sqlite3" "sqlserver" "stub" "testing" "yugabytedb" ];
+  tags = [ "cassandra" "clickhouse" "cockroachdb" "crate" "firebird" "mongodb" "multistmt" "mysql" "neo4j" "pgx" "pgx5" "postgres" "ql" "redshift" "rqlite" "shell" "snowflake" "spanner" "sqlite3" "sqlserver" "stub" "testing" "yugabytedb" ];
 
   meta = with lib; {
     homepage = "https://github.com/golang-migrate/migrate";
diff --git a/pkgs/development/tools/gotestsum/default.nix b/pkgs/development/tools/gotestsum/default.nix
index f28f3f12970c7..5ab4caa621f9a 100644
--- a/pkgs/development/tools/gotestsum/default.nix
+++ b/pkgs/development/tools/gotestsum/default.nix
@@ -3,14 +3,17 @@
   fetchFromGitHub,
   buildGoModule,
 }:
-buildGoModule rec {
+let
+  version = "1.11.0";
+in
+buildGoModule {
   pname = "gotestsum";
-  version = "1.10.1";
+  inherit version;
 
   src = fetchFromGitHub {
     owner = "gotestyourself";
     repo = "gotestsum";
-    rev = "refs/tags/v${version}";
+    rev = "v${version}";
     hash = "sha256-Sq0ejnX7AJoPf3deBge8PMOq1NlMbw+Ljn145C5MQ+s=";
   };
 
@@ -26,13 +29,13 @@ buildGoModule rec {
 
   subPackages = [ "." ];
 
-  meta = with lib; {
+  meta = {
     homepage = "https://github.com/gotestyourself/gotestsum";
     changelog = "https://github.com/gotestyourself/gotestsum/releases/tag/v${version}";
     description = "A human friendly `go test` runner";
     mainProgram = "gotestsum";
-    platforms = platforms.linux ++ platforms.darwin;
-    license = licenses.asl20;
-    maintainers = with maintainers; [ isabelroses ];
+    platforms = with lib.platforms; linux ++ darwin;
+    license = lib.licenses.asl20;
+    maintainers = with lib.maintainers; [ isabelroses ];
   };
 }
diff --git a/pkgs/development/tools/gtk-mac-bundler/default.nix b/pkgs/development/tools/gtk-mac-bundler/default.nix
index c4ac76f461236..3a6c2619d6e87 100644
--- a/pkgs/development/tools/gtk-mac-bundler/default.nix
+++ b/pkgs/development/tools/gtk-mac-bundler/default.nix
@@ -25,7 +25,7 @@ stdenv.mkDerivation rec {
     description = "a helper script that creates application bundles form GTK executables for macOS";
     maintainers = [ maintainers.matthewbauer ];
     platforms = platforms.darwin;
-    homepage = "https://wiki.gnome.org/Projects/GTK/OSX/Bundling";
+    homepage = "https://gitlab.gnome.org/GNOME/gtk-mac-bundler";
     license = licenses.gpl2;
   };
 }
diff --git a/pkgs/development/tools/language-servers/neocmakelsp/default.nix b/pkgs/development/tools/language-servers/neocmakelsp/default.nix
index b2052d66a35ba..547693200cf0e 100644
--- a/pkgs/development/tools/language-servers/neocmakelsp/default.nix
+++ b/pkgs/development/tools/language-servers/neocmakelsp/default.nix
@@ -5,16 +5,16 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "neocmakelsp";
-  version = "0.6.22";
+  version = "0.6.23";
 
   src = fetchFromGitHub {
     owner = "Decodetalkers";
     repo = "neocmakelsp";
     rev = "v${version}";
-    hash = "sha256-qc0cWEnMH5S4fr9dMQHSWQ2NsCpfWxGvhkYJF7pgnKI=";
+    hash = "sha256-o35uoyrMBxKy31I56j7PAuNP/pyB51VRMp8Ip9vRXdU=";
   };
 
-  cargoHash = "sha256-oPyMHrJTZYavE/M7PrTVv387KShLTg+Kwxg5sRYEkN4=";
+  cargoHash = "sha256-eMMJTY96S27mxpcS44UfvS695ImlhX/E2wuldcPVUtc=";
 
   meta = with lib; {
     description = "A cmake lsp based on tower-lsp and treesitter";
diff --git a/pkgs/development/tools/language-servers/nil/default.nix b/pkgs/development/tools/language-servers/nil/default.nix
index 19822d2977fc1..88d4a6fd36686 100644
--- a/pkgs/development/tools/language-servers/nil/default.nix
+++ b/pkgs/development/tools/language-servers/nil/default.nix
@@ -14,7 +14,7 @@ rustPlatform.buildRustPackage rec {
   cargoHash = "sha256-lyKPmzuZB9rCBI9JxhxlyDtNHLia8FXGnSgV+D/dwgo=";
 
   nativeBuildInputs = [
-    (lib.getBin nixVersions.unstable)
+    (lib.getBin nixVersions.latest)
   ];
 
   env.CFG_RELEASE = version;
diff --git a/pkgs/development/tools/misc/astyle/default.nix b/pkgs/development/tools/misc/astyle/default.nix
index 6620207ae752a..f7c7a1f09cdb0 100644
--- a/pkgs/development/tools/misc/astyle/default.nix
+++ b/pkgs/development/tools/misc/astyle/default.nix
@@ -2,11 +2,11 @@
 
 stdenv.mkDerivation rec {
   pname = "astyle";
-  version = "3.4.13";
+  version = "3.4.14";
 
   src = fetchurl {
     url = "mirror://sourceforge/${pname}/${pname}-${version}.tar.bz2";
-    hash = "sha256-eKYQq9OelOD5E+nuXNoehbtizWM1U97LngDT2SAQGc4=";
+    hash = "sha256-YGqD85FGczGF9nYwWdKSQzxA85Prb1IELhY/jfThaj4=";
   };
 
   nativeBuildInputs = [ cmake ];
diff --git a/pkgs/development/tools/misc/msitools/default.nix b/pkgs/development/tools/misc/msitools/default.nix
index 66571e887e418..0d4d5c2c43311 100644
--- a/pkgs/development/tools/misc/msitools/default.nix
+++ b/pkgs/development/tools/misc/msitools/default.nix
@@ -59,7 +59,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "Set of programs to inspect and build Windows Installer (.MSI) files";
-    homepage = "https://wiki.gnome.org/msitools";
+    homepage = "https://gitlab.gnome.org/GNOME/msitools";
     license = with licenses; [
       # Library
       lgpl21Plus
diff --git a/pkgs/development/tools/nemiver/default.nix b/pkgs/development/tools/nemiver/default.nix
index af02246582120..db25b9f5f4e5f 100644
--- a/pkgs/development/tools/nemiver/default.nix
+++ b/pkgs/development/tools/nemiver/default.nix
@@ -54,15 +54,15 @@ stdenv.mkDerivation rec {
   patches = [
     # build fixes
     (fetchpatch {
-      url = "https://gitlab.gnome.org/GNOME/nemiver/commit/e0e42221ceb77d88be64fac1c09792dc5c9e2f43.patch";
+      url = "https://gitlab.gnome.org/Archive/nemiver/-/commit/e0e42221ceb77d88be64fac1c09792dc5c9e2f43.patch";
       sha256 = "1g0ixll6yqfj6ysf50p0c7nmh3lgmb6ds15703q7ibnw7dyidvj8";
     })
     (fetchpatch {
-      url = "https://gitlab.gnome.org/GNOME/nemiver/commit/7005393a8c4d914eac9705e7f47818d0f4de3578.patch";
+      url = "https://gitlab.gnome.org/Archive/nemiver/-/commit/7005393a8c4d914eac9705e7f47818d0f4de3578.patch";
       sha256 = "1mxb1sdqdj7dm204gja8cdygx8579bjriqqbb7cna9rj0m9c8pjg";
     })
     (fetchpatch {
-      url = "https://gitlab.gnome.org/GNOME/nemiver/commit/262cf9657f9c2727a816972b348692adcc666008.patch";
+      url = "https://gitlab.gnome.org/Archive/nemiver/-/commit/262cf9657f9c2727a816972b348692adcc666008.patch";
       sha256 = "03jv6z54b8nzvplplapk4aj206zl1gvnv6iz0mad19g6yvfbw7a7";
     })
   ];
@@ -79,7 +79,7 @@ stdenv.mkDerivation rec {
   };
 
   meta = with lib; {
-    homepage = "https://wiki.gnome.org/Apps/Nemiver";
+    homepage = "https://gitlab.gnome.org/Archive/nemiver";
     description = "Easy to use standalone C/C++ debugger";
     mainProgram = "nemiver";
     license = licenses.gpl2;
diff --git a/pkgs/development/tools/pip-audit/default.nix b/pkgs/development/tools/pip-audit/default.nix
index 6adcf5529e56d..9deb33c757f40 100644
--- a/pkgs/development/tools/pip-audit/default.nix
+++ b/pkgs/development/tools/pip-audit/default.nix
@@ -1,43 +1,43 @@
-{ lib
-, fetchFromGitHub
-, python3
+{
+  lib,
+  fetchFromGitHub,
+  python3,
 }:
 
 python3.pkgs.buildPythonApplication rec {
   pname = "pip-audit";
-  version = "2.7.2";
+  version = "2.7.3";
   format = "pyproject";
 
   src = fetchFromGitHub {
     owner = "trailofbits";
-    repo = pname;
+    repo = "pip-audit";
     rev = "refs/tags/v${version}";
-    hash = "sha256-IlIPLuHGmnmt6FgX+Psw+f6XpkuhP+BZ+e4k4DV8e/U=";
+    hash = "sha256-MRFfF5OygUCIdUnPvxhYk4IcLSWGgmlw2qgzPoZDniw=";
   };
 
-  nativeBuildInputs = with python3.pkgs; [
-    flit-core
-  ];
+  build-system = with python3.pkgs; [ flit-core ];
 
-  propagatedBuildInputs = with python3.pkgs; [
-    cachecontrol
-    cyclonedx-python-lib
-    html5lib
-    packaging
-    pip-api
-    pip-requirements-parser
-    rich
-    toml
-  ] ++ cachecontrol.optional-dependencies.filecache;
+  dependencies =
+    with python3.pkgs;
+    [
+      cachecontrol
+      cyclonedx-python-lib
+      html5lib
+      packaging
+      pip-api
+      pip-requirements-parser
+      rich
+      toml
+    ]
+    ++ cachecontrol.optional-dependencies.filecache;
 
   nativeCheckInputs = with python3.pkgs; [
     pretend
     pytestCheckHook
   ];
 
-  pythonImportsCheck = [
-    "pip_audit"
-  ];
+  pythonImportsCheck = [ "pip_audit" ];
 
   preCheck = ''
     export HOME=$(mktemp -d);
@@ -60,10 +60,10 @@ python3.pkgs.buildPythonApplication rec {
 
   meta = with lib; {
     description = "Tool for scanning Python environments for known vulnerabilities";
-    mainProgram = "pip-audit";
     homepage = "https://github.com/trailofbits/pip-audit";
     changelog = "https://github.com/pypa/pip-audit/releases/tag/v${version}";
     license = with licenses; [ asl20 ];
     maintainers = with maintainers; [ fab ];
+    mainProgram = "pip-audit";
   };
 }
diff --git a/pkgs/development/tools/profiling/sysprof/default.nix b/pkgs/development/tools/profiling/sysprof/default.nix
index 96747b52a076b..a3637a0188f86 100644
--- a/pkgs/development/tools/profiling/sysprof/default.nix
+++ b/pkgs/development/tools/profiling/sysprof/default.nix
@@ -71,7 +71,7 @@ stdenv.mkDerivation rec {
 
   meta = with lib; {
     description = "System-wide profiler for Linux";
-    homepage = "https://wiki.gnome.org/Apps/Sysprof";
+    homepage = "https://gitlab.gnome.org/GNOME/sysprof";
     longDescription = ''
       Sysprof is a sampling CPU profiler for Linux that uses the perf_event_open
       system call to profile the entire system, not just a single
diff --git a/pkgs/development/tools/rust/cargo-nextest/default.nix b/pkgs/development/tools/rust/cargo-nextest/default.nix
index 8972fef8825a8..de0af79902080 100644
--- a/pkgs/development/tools/rust/cargo-nextest/default.nix
+++ b/pkgs/development/tools/rust/cargo-nextest/default.nix
@@ -2,16 +2,16 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "cargo-nextest";
-  version = "0.9.68";
+  version = "0.9.70";
 
   src = fetchFromGitHub {
     owner = "nextest-rs";
     repo = "nextest";
     rev = "cargo-nextest-${version}";
-    hash = "sha256-LC+0s38ufmMrhNaKSn13jka/M7PG1+gJnqZCXJ7ef6I=";
+    hash = "sha256-YTeKcdUszI/0RCAq6Gcakl3hfUSUo3CfVCMod/IPYhw=";
   };
 
-  cargoHash = "sha256-E/bsVbSdFr1LMrIewsh15Vuk4Dt5UwETLCIhE7TT3kA=";
+  cargoHash = "sha256-FH9ODkK84bPPYyHP4kKcHKWpJ3FV1NC8S/NQFvV63Gw=";
 
   buildInputs = lib.optionals stdenv.isDarwin [
     darwin.apple_sdk.frameworks.SystemConfiguration
diff --git a/pkgs/development/tools/txtpbfmt/default.nix b/pkgs/development/tools/txtpbfmt/default.nix
index af69078fe18c0..d08fe67330a26 100644
--- a/pkgs/development/tools/txtpbfmt/default.nix
+++ b/pkgs/development/tools/txtpbfmt/default.nix
@@ -2,13 +2,13 @@
 
 buildGoModule {
   pname = "txtpbfmt";
-  version = "unstable-2023-10-25";
+  version = "0-unstable-2024-04-16";
 
   src = fetchFromGitHub {
     owner = "protocolbuffers";
     repo = "txtpbfmt";
-    rev = "084445ff1adf0d8a27429bba65dbde5663f02d26";
-    hash = "sha256-SoU1GON9avesty6FSZ+z6o2JHInUtwv+PVOzqCu+8L8=";
+    rev = "1e18ef0a7fdc4d28b9223d2d50b4b2be7024519e";
+    hash = "sha256-L96aEAlPvdBXxAbH8IszQK0r7ouICmFrkHtTJe/dD+E=";
   };
 
   vendorHash = "sha256-IdD+R8plU4/e9fQaGSM5hJxyMECb6hED0Qg8afwHKbY=";
@@ -17,9 +17,9 @@ buildGoModule {
 
   meta = with lib; {
     description = "Formatter for text proto files";
-    mainProgram = "txtpbfmt";
     homepage = "https://github.com/protocolbuffers/txtpbfmt";
     license = licenses.asl20;
     maintainers = with maintainers; [ aaronjheng ];
+    mainProgram = "txtpbfmt";
   };
 }
diff --git a/pkgs/development/web/flyctl/default.nix b/pkgs/development/web/flyctl/default.nix
index 78a69303a3cbc..489a38efcf12f 100644
--- a/pkgs/development/web/flyctl/default.nix
+++ b/pkgs/development/web/flyctl/default.nix
@@ -2,16 +2,16 @@
 
 buildGo122Module rec {
   pname = "flyctl";
-  version = "0.2.40";
+  version = "0.2.46";
 
   src = fetchFromGitHub {
     owner = "superfly";
     repo = "flyctl";
     rev = "v${version}";
-    hash = "sha256-HIJ2EAfNKVlECXHgw2qx5OlWv5davaBrtrSQVsdrKKY=";
+    hash = "sha256-x7ICqPm3c2bpNb18vNxZVlkxtgCL2GqLMv8TxI7cUfg=";
   };
 
-  vendorHash = "sha256-uA9Sfovz42+JT+AEY7t4dwWpIUgqX8qdGto7LU7qLtY=";
+  vendorHash = "sha256-tLlWPKMRPFyMDZGkdjb/hF/7/OPpducGXyGlXExBG64=";
 
   subPackages = [ "." ];
 
@@ -52,12 +52,12 @@ buildGo122Module rec {
     version = "v${flyctl.version}";
   };
 
-  meta = with lib; {
+  meta = {
     description = "Command line tools for fly.io services";
     downloadPage = "https://github.com/superfly/flyctl";
     homepage = "https://fly.io/";
-    license = licenses.asl20;
-    maintainers = with maintainers; [ adtya jsierles techknowlogick ];
+    license = lib.licenses.asl20;
+    maintainers = with lib.maintainers; [ adtya jsierles techknowlogick ];
     mainProgram = "flyctl";
   };
 }