diff options
Diffstat (limited to 'pkgs/top-level')
-rw-r--r-- | pkgs/top-level/all-packages.nix | 39 | ||||
-rw-r--r-- | pkgs/top-level/python-packages.nix | 5 |
2 files changed, 15 insertions, 29 deletions
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 01270b99a1d68..e037089848fd7 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -4975,12 +4975,11 @@ in hdf5 = callPackage ../tools/misc/hdf5 { gfortran = null; szip = null; - mpi = null; }; hdf5-mpi = appendToName "mpi" (hdf5.override { szip = null; - mpi = pkgs.openmpi; + mpiSupport = true; }); hdf5-cpp = appendToName "cpp" (hdf5.override { @@ -7220,6 +7219,8 @@ in openmpi = callPackage ../development/libraries/openmpi { }; + mpi = openmpi; # this attribute should used to build MPI applications + ucx = callPackage ../development/libraries/ucx {}; openmodelica = callPackage ../applications/science/misc/openmodelica { @@ -22101,9 +22102,7 @@ in fractal = callPackage ../applications/networking/instant-messengers/fractal { }; - freecad = libsForQt5.callPackage ../applications/graphics/freecad { - mpi = openmpi; - }; + freecad = libsForQt5.callPackage ../applications/graphics/freecad { }; freemind = callPackage ../applications/misc/freemind { jdk = jdk8; # TODO: remove override https://github.com/NixOS/nixpkgs/pull/89731 @@ -22489,7 +22488,7 @@ in hpcg = callPackage ../tools/misc/hpcg/default.nix { }; - hpl = callPackage ../tools/misc/hpl { mpi = openmpi; }; + hpl = callPackage ../tools/misc/hpl { }; hpmyroom = libsForQt5.callPackage ../applications/networking/hpmyroom { }; @@ -27263,15 +27262,11 @@ in quantum-espresso = callPackage ../applications/science/chemistry/quantum-espresso { }; - quantum-espresso-mpi = callPackage ../applications/science/chemistry/quantum-espresso { - mpi = openmpi; - }; + quantum-espresso-mpi = callPackage ../applications/science/chemistry/quantum-espresso { useMpi = true; }; siesta = callPackage ../applications/science/chemistry/siesta { }; - siesta-mpi = callPackage ../applications/science/chemistry/siesta { - mpi = openmpi; - }; + siesta-mpi = callPackage ../applications/science/chemistry/siesta { useMpi = true; }; ### SCIENCE/GEOMETRY @@ -27402,7 +27397,7 @@ in }; neuron-mpi = appendToName "mpi" (neuron.override { - mpi = pkgs.openmpi; + useMpi = true; }); neuron-full = neuron-mpi.override { inherit python; }; @@ -27454,7 +27449,7 @@ in raxml = callPackage ../applications/science/biology/raxml { }; raxml-mpi = appendToName "mpi" (raxml.override { - mpi = true; + useMpi = true; }); sambamba = callPackage ../applications/science/biology/sambamba { }; @@ -27576,9 +27571,7 @@ in planarity = callPackage ../development/libraries/science/math/planarity { }; - scalapack = callPackage ../development/libraries/science/math/scalapack { - mpi = openmpi; - }; + scalapack = callPackage ../development/libraries/science/math/scalapack { }; rankwidth = callPackage ../development/libraries/science/math/rankwidth { }; @@ -27608,9 +27601,7 @@ in petsc = callPackage ../development/libraries/science/math/petsc { }; - parmetis = callPackage ../development/libraries/science/math/parmetis { - mpi = openmpi; - }; + parmetis = callPackage ../development/libraries/science/math/parmetis { }; QuadProgpp = callPackage ../development/libraries/science/math/QuadProgpp { }; @@ -27640,17 +27631,13 @@ in ### SCIENCE/MOLECULAR-DYNAMICS - dl-poly-classic-mpi = callPackage ../applications/science/molecular-dynamics/dl-poly-classic { - mpi = openmpi; - }; + dl-poly-classic-mpi = callPackage ../applications/science/molecular-dynamics/dl-poly-classic { }; lammps = callPackage ../applications/science/molecular-dynamics/lammps { fftw = fftw; }; - lammps-mpi = lowPrio (lammps.override { - mpi = openmpi; - }); + lammps-mpi = lowPrio (lammps.override { withMPI = true; }); gromacs = callPackage ../applications/science/molecular-dynamics/gromacs { singlePrec = true; diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 2b3aadd7210cc..d37d837e4e12a 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -2188,7 +2188,6 @@ in { fenics = callPackage ../development/libraries/science/math/fenics { inherit (pkgs) pkg-config; - mpi = pkgs.openmpi; pytest = self.pytest_4; }; @@ -3490,7 +3489,7 @@ in { labelbox = callPackage ../development/python-modules/labelbox { }; - lammps-cython = callPackage ../development/python-modules/lammps-cython { mpi = pkgs.openmpi; }; + lammps-cython = callPackage ../development/python-modules/lammps-cython { mpi = pkgs.mpi; }; langcodes = callPackage ../development/python-modules/langcodes { }; @@ -4124,7 +4123,7 @@ in { mpd = callPackage ../development/python-modules/mpd { }; - mpi4py = callPackage ../development/python-modules/mpi4py { mpi = pkgs.openmpi; }; + mpi4py = callPackage ../development/python-modules/mpi4py { mpi = pkgs.mpi; }; mplleaflet = callPackage ../development/python-modules/mplleaflet { }; |