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-rw-r--r--pkgs/top-level/aliases.nix32
-rw-r--r--pkgs/top-level/all-packages.nix232
-rw-r--r--pkgs/top-level/darwin-packages.nix2
-rw-r--r--pkgs/top-level/perl-packages.nix28
-rw-r--r--pkgs/top-level/python-packages.nix23
-rw-r--r--pkgs/top-level/qt5-packages.nix4
6 files changed, 209 insertions, 112 deletions
diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix
index 4f00b0e30c906..2d2fb1580b7aa 100644
--- a/pkgs/top-level/aliases.nix
+++ b/pkgs/top-level/aliases.nix
@@ -782,7 +782,7 @@ mapAliases ({
   keepnote = throw "keepnote has been removed from nixpkgs, as it is stuck on python2"; # Added 2022-01-01
   kerberos = libkrb5; # moved from top-level 2021-03-14
   kexectools = kexec-tools; # Added 2021-09-03
-  kexpand = "kexpand awless has been dropped due to the lack of maintanence from upstream since 2017"; # Added 2022-06-01
+  kexpand = throw "kexpand awless has been dropped due to the lack of maintanence from upstream since 2017"; # Added 2022-06-01
   keybase-go = throw "'keybase-go' has been renamed to/replaced by 'keybase'"; # Converted to throw 2022-02-22
   keysmith = libsForQt5.kdeGear.keysmith; # Added 2021-07-14
   kgx = gnome-console; # Added 2022-02-19
@@ -814,9 +814,9 @@ mapAliases ({
   letsencrypt = throw "'letsencrypt' has been renamed to/replaced by 'certbot'"; # Converted to throw 2022-02-22
   libGL_driver = throw "'libGL_driver' has been renamed to/replaced by 'mesa.drivers'"; # Converted to throw 2022-02-22
   libaudit = throw "'libaudit' has been renamed to/replaced by 'audit'"; # Converted to throw 2022-02-22
-  libayatana-indicator-gtk2 = "'libayatana-indicator-gtk2' has been removed from nixpkgs, as gtk2 is deprecated"; # Added 2022-10-18
+  libayatana-indicator-gtk2 = throw "'libayatana-indicator-gtk2' has been removed from nixpkgs, as gtk2 is deprecated"; # Added 2022-10-18
   libayatana-indicator-gtk3 = libayatana-indicator; # Added 2022-10-18
-  libayatana-appindicator-gtk2 = "'libayatana-appindicator-gtk2' has been removed from nixpkgs, as gtk2 is deprecated"; # Added 2022-10-18
+  libayatana-appindicator-gtk2 = throw "'libayatana-appindicator-gtk2' has been removed from nixpkgs, as gtk2 is deprecated"; # Added 2022-10-18
   libayatana-appindicator-gtk3 = libayatana-appindicator; # Added 2022-10-18
   libbencodetools = bencodetools; # Added 2022-07-30
   libbluedevil = throw "'libbluedevil' (Qt4) is unmaintained and unused since 'kde4.bluedevil's removal in 2017"; # Added 2022-06-14
@@ -1121,9 +1121,19 @@ mapAliases ({
   nmap-unfree = nmap; # Added 2021-04-06
   nmap-graphical = throw "nmap graphical support has been removed due to its python2 dependency"; # Added 2022-04-26
   nmap_graphical = throw "nmap graphical support has been removed due to its python2 dependency"; # Modified 2022-04-26
-  nodejs-10_x = throw "nodejs-10_x has been removed. Use a newer version instead."; # Added 2022-05-31
-  nodejs-12_x = throw "nodejs-12_x has been removed. Use a newer version instead."; # Added 2022-07-04
+  nodejs_10 = throw "nodejs-10_x has been removed. Use a newer version instead."; # Added 2022-05-31
+  nodejs-10_x = nodejs_10; # Added 2022-11-06
+  nodejs_12 = throw "nodejs-12_x has been removed. Use a newer version instead."; # Added 2022-07-04
+  nodejs-12_x = nodejs_12; # Added 2022-11-06
+  nodejs-14_x = nodejs_14; # Added 2022-11-06
+  nodejs-slim-14_x = nodejs-slim_14; # Added 2022-11-06
+  nodejs-16_x = nodejs_16; # Added 2022-11-06
   nodejs-16_x-openssl_1_1 = throw "nodejs-16_x-openssl_1_1 has been removed."; # Added 2023-02-04
+  nodejs-slim-16_x = nodejs-slim_16; # Added 2022-11-06
+  nodejs-18_x = nodejs_18; # Added 2022-11-06
+  nodejs-slim-18_x = nodejs-slim_18; # Added 2022-11-06
+  nodejs-19_x = nodejs_19; # Added 2022-11-06
+  nodejs-slim-19_x = nodejs-slim_19; # Added 2022-11-06
   nologin = throw "'nologin' has been renamed to/replaced by 'shadow'"; # Converted to throw 2022-02-22
   nomad_1_1 = throw "nomad_1_1 has been removed because it's outdated. Use a a newer version instead"; # Added 2022-05-22
   nordic-polar = throw "nordic-polar was removed on 2021-05-27, now integrated in nordic"; # Added 2021-05-27
@@ -1628,7 +1638,7 @@ mapAliases ({
   torchPackages = throw "torchPackages has been removed, as the upstream project has been abandoned"; # Added 2020-03-28
   trang = throw "'trang' has been renamed to/replaced by 'jing-trang'"; # Converted to throw 2022-02-22
   transfig = fig2dev; # Added 2022-02-15
-  transmission-remote-cli = "transmission-remote-cli has been removed, as the upstream project has been abandoned. Please use tremc instead"; # Added 2020-10-14
+  transmission-remote-cli = throw "transmission-remote-cli has been removed, as the upstream project has been abandoned. Please use tremc instead"; # Added 2020-10-14
   transmission_gtk = throw "'transmission_gtk' has been renamed to/replaced by 'transmission-gtk'"; # Converted to throw 2022-02-22
   transmission_remote_gtk = throw "'transmission_remote_gtk' has been renamed to/replaced by 'transmission-remote-gtk'"; # Converted to throw 2022-02-22
   transporter = throw "transporter has been removed. It was archived upstream, so it's considered abandoned";
@@ -1711,6 +1721,7 @@ mapAliases ({
   weechat-matrix-bridge = throw "'weechat-matrix-bridge' has been renamed to/replaced by 'weechatScripts.weechat-matrix-bridge'"; # Converted to throw 2022-02-22
   weighttp = throw "weighttp has been removed: abandoned by upstream"; # Added 2022-04-20
   whirlpool-gui = throw "whirlpool-gui has been removed as it depended on an insecure version of Electron"; # added 2022-02-08
+  wio = throw "wio has been removed from nixpkgs, it was unmaintained and required wlroots_0_14 at the time of removal"; # Added 2023-04-28
   wicd = throw "wicd has been removed as it is abandoned"; # Added 2021-09-11
   wineFull = throw "'wineFull' has been renamed to/replaced by 'winePackages.full'"; # Converted to throw 2022-02-22
   wineMinimal = throw "'wineMinimal' has been renamed to/replaced by 'winePackages.minimal'"; # Converted to throw 2022-02-22
@@ -1823,10 +1834,6 @@ mapAliases ({
   zeromq3 = throw "zeromq3 has been deprecated by zeromq4";
   jzmq = throw "jzmq has been removed from nixpkgs, as it was unmaintained";
 
-  avian = throw ''
-    The package doesn't compile anymore on NixOS and both development &
-    maintenance is abandoned by upstream.
-  ''; # Cleanup before 21.11, Added 2021-05-07
   ant-dracula-theme = throw "ant-dracula-theme is now dracula-theme, and theme name is Dracula instead of Ant-Dracula";
   dina-font-pcf = dina-font; # Added 2020-02-09
   dnscrypt-proxy = throw "dnscrypt-proxy has been removed. Please use dnscrypt-proxy2"; # Added 2020-02-02
@@ -1860,12 +1867,7 @@ mapAliases ({
     Its new location is obs-studio-plugins.wlrobs.
   ''; # Added 2021-06-01
 
-  oraclejdk8psu = throw "The *psu versions of oraclejdk are no longer provided by upstream"; # Cleanup before 20.09
-  oraclejre8psu = oraclejdk8psu; # Cleanup before 20.09
-  oraclejdk8psu_distro = oraclejdk8psu; # Cleanup before 20.09
   posix_man_pages = man-pages-posix; # Added 2021-04-15
-  riot-desktop = throw "riot-desktop is now element-desktop!"; # Cleanup before 21.05
-  riot-web = throw "riot-web is now element-web"; # Cleanup before 21.05
   sqldeveloper_18 = throw "sqldeveloper_18 is not maintained anymore!"; # Added 2020-02-04
   todolist = throw "todolist is now ultralist"; # Added 2020-12-27
   tor-browser-bundle = throw "tor-browser-bundle was removed because it was out of date and inadequately maintained. Please use tor-browser-bundle-bin instead"; # Added 2020-01-10
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 20f1e7b4aaaef..c2397c4ce5dbe 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -543,6 +543,8 @@ with pkgs;
 
   expressvpn = callPackage ../applications/networking/expressvpn { };
 
+  figma-agent = callPackage ../applications/graphics/figma-agent { };
+
   figma-linux = callPackage ../applications/graphics/figma-linux { };
 
   firefly-desktop = callPackage ../applications/misc/firefly-desktop { };
@@ -1544,6 +1546,8 @@ with pkgs;
 
   godspeed = callPackage ../tools/networking/godspeed { };
 
+  gp-saml-gui = python3Packages.callPackage ../tools/networking/gp-saml-gui { };
+
   guestfs-tools = callPackage ../tools/virtualization/guestfs-tools { };
 
   fabs = callPackage ../tools/backup/fabs { };
@@ -1574,6 +1578,8 @@ with pkgs;
 
   kubevirt = callPackage ../tools/virtualization/kubevirt { };
 
+  license-cli = callPackage ../tools/misc/license-cli { };
+
   license-generator = callPackage ../tools/misc/license-generator { };
 
   linux-router = callPackage ../tools/networking/linux-router { };
@@ -1634,6 +1640,8 @@ with pkgs;
 
   sorted-grep = callPackage ../tools/text/sorted-grep { };
 
+  smbmap = callPackage ../tools/security/smbmap { };
+
   smbscan = callPackage ../tools/security/smbscan { };
 
   spectre-cli = callPackage ../tools/security/spectre-cli { };
@@ -2525,6 +2533,8 @@ with pkgs;
     fox = fox_1_6;
   };
 
+  xplr = callPackage ../applications/file-managers/xplr { };
+
   ytree = callPackage ../applications/file-managers/ytree { };
 
   ### APPLICATIONS/TERMINAL-EMULATORS
@@ -3586,7 +3596,7 @@ with pkgs;
 
   play-with-mpv = callPackage ../tools/video/play-with-mpv { };
 
-  plausible = callPackage ../servers/web-apps/plausible { nodejs = nodejs-16_x; };
+  plausible = callPackage ../servers/web-apps/plausible { nodejs = nodejs_16; };
 
   pam-reattach = callPackage ../os-specific/darwin/pam-reattach { };
 
@@ -5564,6 +5574,8 @@ with pkgs;
     electron = electron_22;
   };
 
+  portal = callPackage ../tools/misc/portal { };
+
   pouf = callPackage ../tools/misc/pouf { };
 
   poweralertd = callPackage ../tools/misc/poweralertd { };
@@ -5617,7 +5629,7 @@ with pkgs;
   river = callPackage ../applications/window-managers/river { };
 
   rivercarro = callPackage ../applications/misc/rivercarro {
-    zig = zig_0_9;
+    zig = buildPackages.zig_0_9;
   };
 
   river-luatile = callPackage ../applications/misc/river-luatile{ };
@@ -5876,13 +5888,7 @@ with pkgs;
     enableExtraPlugins = true;
   };
 
-  asciidoctor = callPackage ../tools/typesetting/asciidoctor {
-    bundlerApp = bundlerApp.override {
-      # asciidoc supports both ruby 2 and 3,
-      # but we don't want to be stuck on it:
-      ruby = ruby_3_1;
-    };
-  };
+  asciidoctor = callPackage ../tools/typesetting/asciidoctor { };
 
   asciidoctor-with-extensions = callPackage ../tools/typesetting/asciidoctor-with-extensions { };
 
@@ -6170,9 +6176,9 @@ with pkgs;
 
   hedgedoc = callPackage ../servers/web-apps/hedgedoc {
     inherit (callPackage ../development/tools/yarn2nix-moretea/yarn2nix {
-      nodejs = nodejs-16_x;
+      nodejs = nodejs_16;
     }) mkYarnPackage;
-    nodejs = nodejs-16_x;
+    nodejs = nodejs_16;
   };
 
   colord = callPackage ../tools/misc/colord { };
@@ -7440,7 +7446,7 @@ with pkgs;
   findutils = callPackage ../tools/misc/findutils { };
 
   findup = callPackage ../tools/misc/findup {
-    zig = zig_0_9;
+    zig = buildPackages.zig_0_9;
   };
 
   fingerprintx = callPackage ../tools/security/fingerprintx { };
@@ -7458,6 +7464,8 @@ with pkgs;
 
   flashrom = callPackage ../tools/misc/flashrom { };
 
+  flashrom-stable = callPackage ../tools/misc/flashrom-stable { };
+
   flent = python3Packages.callPackage ../applications/networking/flent { };
 
   flexoptix-app = callPackage ../tools/misc/flexoptix-app { };
@@ -7644,6 +7652,7 @@ with pkgs;
     foundationdb52
     foundationdb60
     foundationdb61
+    foundationdb71
   ;
 
   foundationdb = foundationdb61;
@@ -7911,8 +7920,13 @@ with pkgs;
   gnupg1orig = callPackage ../tools/security/gnupg/1.nix { };
   gnupg1compat = callPackage ../tools/security/gnupg/1compat.nix { };
   gnupg1 = gnupg1compat;    # use config.packageOverrides if you prefer original gnupg1
+
+  gnupg22 = callPackage ../tools/security/gnupg/22.nix {
+    pinentry = if stdenv.isDarwin then pinentry_mac else pinentry-gtk2;
+    libgcrypt = libgcrypt_1_8;
+  };
+
   gnupg24 = callPackage ../tools/security/gnupg/24.nix {
-    guiSupport = stdenv.isDarwin;
     pinentry = if stdenv.isDarwin then pinentry_mac else pinentry-gtk2;
   };
   gnupg = gnupg24;
@@ -8437,6 +8451,8 @@ with pkgs;
 
   hostname-debian = callPackage ../tools/networking/hostname-debian { };
 
+  hotdoc = python3Packages.callPackage ../development/tools/hotdoc { };
+
   hotpatch = callPackage ../development/libraries/hotpatch { };
 
   hotspot = libsForQt5.callPackage ../development/tools/analysis/hotspot { };
@@ -9394,27 +9410,27 @@ with pkgs;
 
   nodenv = callPackage ../development/tools/nodenv { };
 
-  nodejs = hiPrio nodejs-18_x;
+  nodejs = hiPrio nodejs_18;
 
-  nodejs-slim = nodejs-slim-18_x;
+  nodejs-slim = nodejs-slim_18;
 
-  nodejs-14_x = callPackage ../development/web/nodejs/v14.nix {
+  nodejs_14 = callPackage ../development/web/nodejs/v14.nix {
     openssl = openssl_1_1;
   };
-  nodejs-slim-14_x = callPackage ../development/web/nodejs/v14.nix {
+  nodejs-slim_14 = callPackage ../development/web/nodejs/v14.nix {
     openssl = openssl_1_1;
     enableNpm = false;
   };
-  nodejs-16_x = callPackage ../development/web/nodejs/v16.nix { };
-  nodejs-slim-16_x = callPackage ../development/web/nodejs/v16.nix {
+  nodejs_16 = callPackage ../development/web/nodejs/v16.nix { };
+  nodejs-slim_16 = callPackage ../development/web/nodejs/v16.nix {
     enableNpm = false;
   };
-  nodejs-18_x = callPackage ../development/web/nodejs/v18.nix { };
-  nodejs-slim-18_x = callPackage ../development/web/nodejs/v18.nix {
+  nodejs_18 = callPackage ../development/web/nodejs/v18.nix { };
+  nodejs-slim_18 = callPackage ../development/web/nodejs/v18.nix {
     enableNpm = false;
   };
-  nodejs-19_x = callPackage ../development/web/nodejs/v19.nix { };
-  nodejs-slim-19_x = callPackage ../development/web/nodejs/v19.nix {
+  nodejs_19 = callPackage ../development/web/nodejs/v19.nix { };
+  nodejs-slim_19 = callPackage ../development/web/nodejs/v19.nix {
     enableNpm = false;
   };
   nodejs_20 = callPackage ../development/web/nodejs/v20.nix { };
@@ -9981,10 +9997,10 @@ with pkgs;
   };
 
   mirakurun = callPackage ../applications/video/mirakurun {
-    yarn = yarn.override { nodejs = nodejs-16_x; };
+    yarn = yarn.override { nodejs = nodejs_16; };
     inherit (callPackage ../development/tools/yarn2nix-moretea/yarn2nix {
-      nodejs = nodejs-16_x;
-      yarn = yarn.override { nodejs = nodejs-16_x; };
+      nodejs = nodejs_16;
+      yarn = yarn.override { nodejs = nodejs_16; };
     }) mkYarnPackage;
   };
 
@@ -11472,7 +11488,7 @@ with pkgs;
   rocket = libsForQt5.callPackage ../tools/graphics/rocket { };
 
   rtabmap = libsForQt5.callPackage ../applications/video/rtabmap/default.nix {
-    pcl = pcl.override { vtk_8 = vtk_8_withQt5; };
+    pcl = pcl.override { vtk = vtkWithQt5; };
   };
 
   rtaudio = callPackage ../development/libraries/audio/rtaudio {
@@ -13484,6 +13500,10 @@ with pkgs;
 
   wireguard-tools = callPackage ../tools/networking/wireguard-tools { };
 
+  wireguard-vanity-address = callPackage ../tools/networking/wireguard-vanity-address {
+    inherit (darwin.apple_sdk.frameworks) Security;
+  };
+
   wireproxy = callPackage ../tools/networking/wireproxy { };
 
   wiringpi = callPackage ../os-specific/linux/wiringpi { };
@@ -13530,12 +13550,13 @@ with pkgs;
 
   xe = callPackage ../tools/system/xe { };
 
-  xplr = callPackage ../applications/misc/xplr { };
 
   xray = callPackage ../tools/networking/xray { };
 
   xteve = callPackage ../servers/xteve { };
 
+  termbook = callPackage ../tools/text/termbook { };
+
   testdisk = libsForQt5.callPackage ../tools/system/testdisk { };
 
   testdisk-qt = testdisk.override { enableQt = true; };
@@ -13972,7 +13993,23 @@ with pkgs;
 
   xxv = callPackage ../tools/misc/xxv { };
 
-  xvfb-run = callPackage ../tools/misc/xvfb-run { inherit (texFunctions) fontsConf; };
+  xvfb-run = callPackage ../tools/misc/xvfb-run {
+    inherit (texFunctions) fontsConf;
+
+    # xvfb-run is used by a bunch of things to run tests
+    # and doesn't support hardware accelerated rendering
+    # so remove it from the rebuild heavy path for mesa
+    xorgserver = xorg.xorgserver.overrideAttrs(old: {
+      buildInputs = lib.filter (pkg: lib.getName pkg != "mesa") old.buildInputs;
+      configureFlags = old.configureFlags ++ [
+        "--disable-glamor"
+        "--disable-glx"
+        "--disable-dri"
+        "--disable-dri2"
+        "--disable-dri3"
+      ];
+    });
+  };
 
   xvkbd = callPackage ../tools/X11/xvkbd { };
 
@@ -14646,8 +14683,10 @@ with pkgs;
 
   flutterPackages =
     recurseIntoAttrs (callPackage ../development/compilers/flutter { });
-  flutter = flutterPackages.stable;
-  flutter2 = flutterPackages.v2;
+  flutter-unwrapped = flutterPackages.stable;
+  flutter2-unwrapped = flutterPackages.v2;
+  flutter = flutterPackages.wrapFlutter flutter-unwrapped;
+  flutter2 = flutterPackages.wrapFlutter flutter2-unwrapped;
 
   fnm = callPackage ../development/tools/fnm {
     inherit (darwin.apple_sdk.frameworks) DiskArbitration Foundation Security;
@@ -14933,15 +14972,6 @@ with pkgs;
     profiledCompiler = false;
   });
 
-  gfortran-tmp-noisystem = wrapCCWith { grossHackForStagingNext = true; cc = (gcc.cc.override {
-    name = "gfortran";
-    langFortran = true;
-    langCC = false;
-    langC = false;
-    profiledCompiler = false;
-    disableBootstrap = false;
-  }); };
-
   gfortran48 = wrapCC (gcc48.cc.override {
     name = "gfortran";
     langFortran = true;
@@ -15423,12 +15453,8 @@ with pkgs;
   julia_16-bin = callPackage ../development/compilers/julia/1.6-bin.nix { };
   julia_18-bin = callPackage ../development/compilers/julia/1.8-bin.nix { };
 
-  julia_18 = callPackage ../development/compilers/julia/1.8.nix {
-    gfortran = gfortran-tmp-noisystem;
-  };
-  julia_19 = callPackage ../development/compilers/julia/1.9.nix {
-    gfortran = gfortran-tmp-noisystem;
-  };
+  julia_18 = callPackage ../development/compilers/julia/1.8.nix { };
+  julia_19 = callPackage ../development/compilers/julia/1.9.nix { };
 
   julia-lts-bin = julia_16-bin;
   julia-stable-bin = julia_18-bin;
@@ -15628,9 +15654,6 @@ with pkgs;
 
   llvmPackages_rocm = recurseIntoAttrs (callPackage ../development/compilers/llvm/rocm { });
 
-  # temporary hack; see PR #225846
-  stdenv-tmpDropB = overrideCC stdenv (wrapCCWith { tmpDropB = true; inherit (stdenv.cc) cc; });
-
   lorri = callPackage ../tools/misc/lorri {
     inherit (darwin.apple_sdk.frameworks) CoreServices Security;
   };
@@ -16035,7 +16058,6 @@ with pkgs;
   mrustc = callPackage ../development/compilers/mrustc { };
   mrustc-minicargo = callPackage ../development/compilers/mrustc/minicargo.nix { };
   mrustc-bootstrap = callPackage ../development/compilers/mrustc/bootstrap.nix {
-    stdenv = gcc10StdenvCompat;
     openssl = openssl_1_1;
   };
 
@@ -16222,6 +16244,7 @@ with pkgs;
   cargo-unused-features = callPackage ../development/tools/rust/cargo-unused-features { };
 
   cargo-tauri = callPackage ../development/tools/rust/cargo-tauri { };
+  tauri-mobile = callPackage ../development/tools/rust/tauri-mobile { };
 
   cargo-valgrind = callPackage ../development/tools/rust/cargo-valgrind { };
   cargo-vet = callPackage ../development/tools/rust/cargo-vet {
@@ -16266,6 +16289,7 @@ with pkgs;
 
   ograc = callPackage ../development/tools/rust/ograc { };
 
+  ravedude = callPackage ../development/tools/rust/ravedude { };
   rhack = callPackage ../development/tools/rust/rhack { };
   roogle = callPackage ../development/tools/rust/roogle { };
   rustfmt = rustPackages.rustfmt;
@@ -17066,8 +17090,8 @@ with pkgs;
     ruby_3_1
     ruby_3_2;
 
-  ruby = ruby_2_7;
-  rubyPackages = rubyPackages_2_7;
+  ruby = ruby_3_1;
+  rubyPackages = rubyPackages_3_1;
 
   rubyPackages_2_7 = recurseIntoAttrs ruby_2_7.gems;
   rubyPackages_3_0 = recurseIntoAttrs ruby_3_0.gems;
@@ -17388,7 +17412,7 @@ with pkgs;
   verible = callPackage ../development/tools/language-servers/verible { };
 
   zls = callPackage ../development/tools/language-servers/zls {
-    zig = zig_0_10;
+    zig = buildPackages.zig_0_10;
   };
 
   ansible-later = with python3.pkgs; toPythonApplication ansible-later;
@@ -19504,11 +19528,12 @@ with pkgs;
     boost179
     boost180
     boost181
+    boost182
   ;
 
   boost16x = boost169;
   boost17x = boost179;
-  boost18x = boost181;
+  boost18x = boost182;
   boost = boost17x;
 
   boost_process = callPackage ../development/libraries/boost-process { };
@@ -19544,7 +19569,7 @@ with pkgs;
   c-blosc = callPackage ../development/libraries/c-blosc { };
 
   # justStaticExecutables is needed due to https://github.com/NixOS/nix/issues/2990
-  cachix = haskell.lib.justStaticExecutables haskellPackages.cachix;
+  cachix = haskell.lib.justStaticExecutables haskellPackages.cachix_1_3_3;
 
   calcium = callPackage ../development/libraries/calcium { };
 
@@ -20953,7 +20978,7 @@ with pkgs;
   };
 
   isso = callPackage ../servers/isso {
-    nodejs = nodejs-14_x;
+    nodejs = nodejs_14;
   };
 
   itk_5_2 = callPackage ../development/libraries/itk/5.2.x.nix {
@@ -21618,7 +21643,7 @@ with pkgs;
 
   libgcrypt = callPackage ../development/libraries/libgcrypt { };
 
-  libgcrypt_1_5 = callPackage ../development/libraries/libgcrypt/1.5.nix { };
+  libgcrypt_1_8 = callPackage ../development/libraries/libgcrypt/1.8.nix { };
 
   libgdiplus = callPackage ../development/libraries/libgdiplus {
       inherit (darwin.apple_sdk.frameworks) Carbon;
@@ -22646,27 +22671,17 @@ with pkgs;
   # Default libGLU
   libGLU = mesa_glu;
 
-  # When a new patch is out, add a new mesa attribute with the exact patch version
-  # Remove old mesa attributes when they're unused.
-  # Try to keep the previous version around for a bit in case there are new bugs.
-  mesa_22_3_7 = darwin.apple_sdk_11_0.callPackage ../development/libraries/mesa/22.3.7.nix {
+  # Keep Mesa 22.3 for now because 23.0 does not build on Darwin.
+  # FIXME: remove, also investigate why we even need Mesa on Darwin.
+  mesa_22_3 = darwin.apple_sdk_11_0.callPackage ../development/libraries/mesa/22.3.nix {
     inherit (darwin.apple_sdk_11_0.frameworks) OpenGL;
     inherit (darwin.apple_sdk_11_0.libs) Xplugin;
   };
-  mesa_23_0_1 = darwin.apple_sdk_11_0.callPackage ../development/libraries/mesa/23.0.1.nix {
+  mesa_23_0 = darwin.apple_sdk_11_0.callPackage ../development/libraries/mesa/23.0.nix {
     inherit (darwin.apple_sdk_11_0.frameworks) OpenGL;
     inherit (darwin.apple_sdk_11_0.libs) Xplugin;
   };
-  # Bump this immediately on patches; wait a bit for minor versions
-  mesa_22 = mesa_22_3_7;
-  mesa_23 = mesa_23_0_1;
-  # Bump on staging only, tonnes of packages depend on it.
-  # See https://github.com/NixOS/nixpkgs/issues/218232
-  # Major versions should be bumped when they have proven to be reasonably stable
-  # FIXME: split up libgbm properly
-  # darwin: deferred until stabilized; e.g. see around:
-  #   https://gitlab.freedesktop.org/mesa/mesa/-/merge_requests/21859
-  mesa = if stdenv.isDarwin then mesa_22_3_7 else mesa_23_0_1;
+  mesa = if stdenv.isDarwin then mesa_22_3 else mesa_23_0;
 
   mesa_glu =  callPackage ../development/libraries/mesa-glu {
     inherit (darwin.apple_sdk.frameworks) ApplicationServices;
@@ -22960,6 +22975,8 @@ with pkgs;
 
   ookla-speedtest = callPackage ../tools/networking/ookla-speedtest { };
 
+  open62541 = callPackage ../development/libraries/open62541 { };
+
   openalSoft = callPackage ../development/libraries/openal-soft {
     inherit (darwin.apple_sdk.frameworks) CoreServices AudioUnit AudioToolbox;
   };
@@ -23053,7 +23070,7 @@ with pkgs;
   opensaml-cpp = callPackage ../development/libraries/opensaml-cpp { };
 
   openscenegraph = callPackage ../development/libraries/openscenegraph {
-    inherit (darwin.apple_sdk.frameworks) AGL Carbon Cocoa Foundation;
+    inherit (darwin.apple_sdk.frameworks) AGL Accelerate Carbon Cocoa Foundation;
   };
 
   openslide = callPackage ../development/libraries/openslide { };
@@ -24698,7 +24715,11 @@ with pkgs;
     pkg = callPackage ../development/compilers/sbcl/2.x.nix { version = "2.3.0"; };
     faslExt = "fasl";
   };
-  sbcl = sbcl_2_3_0;
+  sbcl_2_3_2 = wrapLisp {
+    pkg = callPackage ../development/compilers/sbcl/2.x.nix { version = "2.3.2"; };
+    faslExt = "fasl";
+  };
+  sbcl = sbcl_2_3_2;
 
   sbclPackages = recurseIntoAttrs sbcl.pkgs;
 
@@ -25163,6 +25184,8 @@ with pkgs;
     theme-spring = callPackage ../servers/icingaweb2/theme-spring { };
   };
 
+  irrd = callPackage ../servers/irrd { };
+
   inspircd = callPackage ../servers/irc/inspircd { };
 
   inspircdMinimal = inspircd.override { extraModules = []; };
@@ -25217,7 +25240,7 @@ with pkgs;
   };
 
   lemmy-ui = callPackage ../servers/web-apps/lemmy/ui.nix {
-    nodejs = nodejs-14_x;
+    nodejs = nodejs_14;
   };
 
   lightgbm = callPackage ../development/libraries/lightgbm { };
@@ -25415,7 +25438,7 @@ with pkgs;
   outline = callPackage ../servers/web-apps/outline (lib.fix (super: {
     yarn2nix-moretea = yarn2nix-moretea.override { inherit (super) nodejs yarn; };
     yarn = yarn.override { inherit (super) nodejs; };
-    nodejs = nodejs-16_x;
+    nodejs = nodejs_16;
   }));
 
   openbgpd = callPackage ../servers/openbgpd { };
@@ -26298,7 +26321,7 @@ with pkgs;
   busybox = callPackage ../os-specific/linux/busybox { };
   busybox-sandbox-shell = callPackage ../os-specific/linux/busybox/sandbox-shell.nix {
     # musl roadmap has RISC-V support projected for 1.1.20
-    busybox = if !stdenv.hostPlatform.isRiscV && stdenv.hostPlatform.libc != "bionic"
+    busybox = if !stdenv.hostPlatform.isRiscV && !stdenv.hostPlatform.isLoongArch64 && stdenv.hostPlatform.libc != "bionic"
               then pkgsStatic.busybox
               else busybox;
   };
@@ -27337,7 +27360,6 @@ with pkgs;
     withHomed = false;
     withHwdb = false;
     withImportd = false;
-    withKmod = false;
     withLibBPF = false;
     withLibidn2 = false;
     withLocaled = false;
@@ -29868,7 +29890,7 @@ with pkgs;
   epeg = callPackage ../applications/graphics/epeg { };
 
   epgstation = callPackage ../applications/video/epgstation {
-    nodejs = nodejs-16_x;
+    nodejs = nodejs_16;
   };
 
   inherit (gnome) epiphany;
@@ -29915,6 +29937,8 @@ with pkgs;
 
   expenses = callPackage ../applications/misc/expenses { };
 
+  flowtime = callPackage ../applications/misc/flowtime { };
+
   fnott = callPackage ../applications/misc/fnott { };
 
   furnace = callPackage ../applications/audio/furnace {
@@ -30053,7 +30077,7 @@ with pkgs;
   flwrap = callPackage ../applications/radio/flwrap { stdenv = gcc10StdenvCompat; };
 
   fluidsynth = callPackage ../applications/audio/fluidsynth {
-    inherit (darwin.apple_sdk.frameworks) AudioUnit CoreAudio CoreMIDI CoreServices;
+    inherit (darwin.apple_sdk.frameworks) AppKit AudioUnit CoreAudio CoreMIDI CoreServices;
   };
 
   fmit = libsForQt5.callPackage ../applications/audio/fmit { };
@@ -30479,6 +30503,19 @@ with pkgs;
 
   freenet = callPackage ../applications/networking/p2p/freenet {
     gradle = gradle_7;
+    jdk = jdk_headless;
+    # Reduce closure size
+    jre = pkgs.jre_minimal.override {
+      modules = [
+        "java.base"
+        "java.logging"
+        "java.naming"
+        "java.sql"
+        "java.desktop"
+        "java.management"
+      ];
+      jdk = jdk_headless;
+    };
   };
 
   freeoffice = callPackage ../applications/office/softmaker/freeoffice.nix { };
@@ -31084,7 +31121,7 @@ with pkgs;
   waybar = callPackage ../applications/misc/waybar { };
 
   waylock = callPackage ../applications/misc/waylock {
-    zig = zig_0_10;
+    zig = buildPackages.zig_0_10;
   };
 
   wayshot = callPackage ../tools/misc/wayshot { };
@@ -31587,6 +31624,8 @@ with pkgs;
 
   k9s = callPackage ../applications/networking/cluster/k9s { };
 
+  kubecm = callPackage ../applications/networking/cluster/kubecm { };
+
   ktunnel = callPackage ../applications/networking/cluster/ktunnel { };
 
   ktop = callPackage ../applications/networking/cluster/ktop { };
@@ -32030,7 +32069,7 @@ with pkgs;
   merkaartor = libsForQt5.callPackage ../applications/misc/merkaartor { };
 
   mepo = callPackage ../applications/misc/mepo {
-    zig = zig_0_9;
+    zig = buildPackages.zig_0_9;
   };
 
   meshcentral = callPackage ../tools/admin/meshcentral { };
@@ -32695,7 +32734,7 @@ with pkgs;
   netcoredbg = callPackage ../development/tools/misc/netcoredbg { };
 
   ncdu = callPackage ../tools/misc/ncdu {
-    zig = zig_0_10;
+    zig = buildPackages.zig_0_10;
   };
 
   ncdu_1 = callPackage ../tools/misc/ncdu/1.nix { };
@@ -32817,9 +32856,7 @@ with pkgs;
     boost = boost175;
   };
 
-  openimageio = darwin.apple_sdk_11_0.callPackage ../development/libraries/openimageio {
-    fmt = fmt_8;
-  };
+  openimageio = darwin.apple_sdk_11_0.callPackage ../development/libraries/openimageio { };
 
   openjump = callPackage ../applications/misc/openjump { };
 
@@ -32993,7 +33030,7 @@ with pkgs;
   peek = callPackage ../applications/video/peek { };
 
   peertube = callPackage ../servers/peertube {
-    nodejs = nodejs-16_x;
+    nodejs = nodejs_16;
   };
 
   peroxide = callPackage ../applications/networking/peroxide { };
@@ -33569,6 +33606,8 @@ with pkgs;
 
   sacc = callPackage ../applications/networking/gopher/sacc { };
 
+  savvycan = libsForQt5.callPackage ../applications/networking/sniffers/savvycan {};
+
   sayonara = libsForQt5.callPackage ../applications/audio/sayonara { };
 
   sbagen = callPackage ../applications/misc/sbagen { };
@@ -34796,10 +34835,6 @@ with pkgs;
     electron = electron_19;
   };
 
-  wio = callPackage ../applications/window-managers/wio {
-    wlroots = wlroots_0_14;
-  };
-
   windowlab = callPackage ../applications/window-managers/windowlab { };
 
   windowmaker = callPackage ../applications/window-managers/windowmaker { };
@@ -35393,6 +35428,15 @@ with pkgs;
     boost = boost175;
     inherit (darwin) autoSignDarwinBinariesHook;
   };
+  elementsd-simplicity = elementsd.overrideAttrs (_: rec {
+    version = "unstable-2023-04-18";
+    src = fetchFromGitHub {
+      owner = "ElementsProject";
+      repo = "elements";
+      rev = "ea318a45094ab3d31dd017d7781a6f28f1ffaa33"; # simplicity branch latest
+      sha256 = "ooe+If3HWaJWpr2ux7DpiCTqB9Hv+aXjquEjplDjvhM=";
+    };
+  });
 
   ergo = callPackage ../applications/blockchains/ergo { };
 
@@ -35791,7 +35835,7 @@ with pkgs;
   };
 
   blackshades = callPackage ../games/blackshades {
-    zig = zig_0_9;
+    zig = buildPackages.zig_0_9;
   };
 
   blobby = callPackage ../games/blobby { };
@@ -38279,6 +38323,8 @@ with pkgs;
 
   atmos = callPackage ../applications/networking/cluster/atmos { };
 
+  aiac = callPackage ../applications/networking/cluster/aiac { };
+
   fn-cli = callPackage ../applications/networking/cluster/fn-cli { };
 
   areca = callPackage ../applications/backup/areca {
@@ -38851,6 +38897,8 @@ with pkgs;
 
   nix-linter = haskell.lib.compose.justStaticExecutables (haskellPackages.nix-linter);
 
+  nix-melt = callPackage ../tools/nix/nix-melt { };
+
   nixos-option = callPackage ../tools/nix/nixos-option { nix = nixVersions.nix_2_3; };
 
   nix-pin = callPackage ../tools/package-management/nix-pin { };
diff --git a/pkgs/top-level/darwin-packages.nix b/pkgs/top-level/darwin-packages.nix
index 68b50fa9ab08f..732b0404040eb 100644
--- a/pkgs/top-level/darwin-packages.nix
+++ b/pkgs/top-level/darwin-packages.nix
@@ -216,8 +216,6 @@ impure-cmds // appleSourcePackages // chooseLibs // {
   # As the name says, this is broken, but I don't want to lose it since it's a direction we want to go in
   # libdispatch-broken = callPackage ../os-specific/darwin/swift-corelibs/libdispatch.nix { };
 
-  darling = callPackage ../os-specific/darwin/darling/default.nix { };
-
   libtapi = callPackage ../os-specific/darwin/libtapi {};
 
   ios-deploy = callPackage ../os-specific/darwin/ios-deploy {};
diff --git a/pkgs/top-level/perl-packages.nix b/pkgs/top-level/perl-packages.nix
index 29673bd90f50d..64ec8c6f4671b 100644
--- a/pkgs/top-level/perl-packages.nix
+++ b/pkgs/top-level/perl-packages.nix
@@ -1623,6 +1623,34 @@ with self; {
 
   BioExtAlign = callPackage ../development/perl-modules/Bio-Ext-Align { };
 
+  BioDBHTS = buildPerlModule {
+    pname = "Bio-DB-HTS";
+    version = "3.01";
+    src = fetchurl {
+      url = "mirror://cpan/authors/id/A/AV/AVULLO/Bio-DB-HTS-3.01.tar.gz";
+      sha256 = "12a6bc1f579513cac8b9167cce4e363655cc8eba26b7d9fe1170dfe95e044f42";
+    };
+
+    buildInputs = [ pkgs.htslib pkgs.zlib ];
+
+    propagatedBuildInputs = [ BioPerl ];
+    htslibStore = toString pkgs.htslib;
+
+    postPatch = ''
+      # -Wl,-rpath not recognized : replaced by -rpath=
+      sed -i 's/Wl,-rpath,/rpath=/' Build.PL
+    '';
+
+    preBuild = ''
+      export HTSLIB_DIR=${pkgs.htslib}
+    '';
+
+    meta = {
+      description = "Perl interface to HTS library for DNA sequencing";
+      license = lib.licenses.asl20;
+    };
+  };
+
   BioPerl = buildPerlPackage {
     pname = "BioPerl";
     version = "1.7.8";
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 8f0a7c604da12..51fc8c39e4b31 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -22,6 +22,8 @@ self: super: with self; {
 
   accessible-pygments = callPackage ../development/python-modules/accessible-pygments { };
 
+  accelerate = callPackage ../development/python-modules/accelerate { };
+
   accuweather = callPackage ../development/python-modules/accuweather { };
 
   accupy = callPackage ../development/python-modules/accupy { };
@@ -1284,6 +1286,8 @@ self: super: with self; {
 
   bimmer-connected = callPackage ../development/python-modules/bimmer-connected { };
 
+  binary = callPackage ../development/python-modules/binary { };
+
   binaryornot = callPackage ../development/python-modules/binaryornot { };
 
   bincopy = callPackage ../development/python-modules/bincopy { };
@@ -2326,6 +2330,8 @@ self: super: with self; {
 
   dbus-client-gen = callPackage ../development/python-modules/dbus-client-gen { };
 
+  dbus-deviation = callPackage ../development/python-modules/dbus-deviation { };
+
   dbus-fast = callPackage ../development/python-modules/dbus-fast { };
 
   dbus-next = callPackage ../development/python-modules/dbus-next { };
@@ -2745,6 +2751,8 @@ self: super: with self; {
 
   djangorestframework-guardian = callPackage ../development/python-modules/djangorestframework-guardian { };
 
+  djangorestframework-guardian2 = callPackage ../development/python-modules/djangorestframework-guardian2 { };
+
   djangorestframework-recursive = callPackage ../development/python-modules/djangorestframework-recursive { };
 
   djangorestframework-simplejwt = callPackage ../development/python-modules/djangorestframework-simplejwt { };
@@ -3712,6 +3720,7 @@ self: super: with self; {
   foundationdb52 = callPackage ../servers/foundationdb/python.nix { foundationdb = pkgs.foundationdb52; };
   foundationdb60 = callPackage ../servers/foundationdb/python.nix { foundationdb = pkgs.foundationdb60; };
   foundationdb61 = callPackage ../servers/foundationdb/python.nix { foundationdb = pkgs.foundationdb61; };
+  foundationdb71 = callPackage ../servers/foundationdb/python.nix { foundationdb = pkgs.foundationdb71; };
 
   fountains = callPackage ../development/python-modules/fountains { };
 
@@ -5428,8 +5437,12 @@ self: super: with self; {
 
   ledger_agent = callPackage ../development/python-modules/ledger_agent { };
 
+  ledger-bitcoin = callPackage ../development/python-modules/ledger-bitcoin { };
+
   ledgerblue = callPackage ../development/python-modules/ledgerblue { };
 
+  ledgercomm = callPackage ../development/python-modules/ledgercomm { };
+
   ledgerwallet = callPackage ../development/python-modules/ledgerwallet {
     inherit (pkgs.darwin.apple_sdk.frameworks) AppKit;
   };
@@ -7209,6 +7222,8 @@ self: super: with self; {
 
   pefile = callPackage ../development/python-modules/pefile { };
 
+  peft = callPackage ../development/python-modules/peft { };
+
   pelican = callPackage ../development/python-modules/pelican {
     inherit (pkgs) glibcLocales git;
   };
@@ -10503,6 +10518,8 @@ self: super: with self; {
 
   rubymarshal = callPackage ../development/python-modules/rubymarshal { };
 
+  ruff-lsp = callPackage ../development/python-modules/ruff-lsp { };
+
   ruffus = callPackage ../development/python-modules/ruffus { };
 
   runway-python = callPackage ../development/python-modules/runway-python { };
@@ -10539,6 +10556,8 @@ self: super: with self; {
 
   safeio = callPackage ../development/python-modules/safeio { };
 
+  safetensors = callPackage ../development/python-modules/safetensors { };
+
   safety = callPackage ../development/python-modules/safety { };
 
   sagemaker = callPackage ../development/python-modules/sagemaker { };
@@ -11939,6 +11958,8 @@ self: super: with self; {
 
   torchmetrics = callPackage ../development/python-modules/torchmetrics { };
 
+  torchio = callPackage ../development/python-modules/torchio { };
+
   torchinfo = callPackage ../development/python-modules/torchinfo { };
 
   torchlibrosa = callPackage ../development/python-modules/torchlibrosa { };
@@ -12675,6 +12696,8 @@ self: super: with self; {
 
   wheel-inspect = callPackage ../development/python-modules/wheel-inspect { };
 
+  wheezy-template = callPackage ../development/python-modules/wheezy-template { };
+
   whichcraft = callPackage ../development/python-modules/whichcraft { };
 
   whirlpool-sixth-sense = callPackage ../development/python-modules/whirlpool-sixth-sense { };
diff --git a/pkgs/top-level/qt5-packages.nix b/pkgs/top-level/qt5-packages.nix
index 567795e68f70e..6de840951521d 100644
--- a/pkgs/top-level/qt5-packages.nix
+++ b/pkgs/top-level/qt5-packages.nix
@@ -131,7 +131,7 @@ in (kdeFrameworks // plasmaMobileGear // plasma5 // plasma5.thirdParty // kdeGea
   packagekit-qt = callPackage ../tools/package-management/packagekit/qt.nix { };
 
   libopenshot-audio = callPackage ../applications/video/openshot-qt/libopenshot-audio.nix {
-    inherit (pkgs.darwin.apple_sdk.frameworks) AGL Cocoa Foundation;
+    inherit (pkgs.darwin.apple_sdk.frameworks) Accelerate AGL Cocoa Foundation;
   };
 
   libqglviewer = callPackage ../development/libraries/libqglviewer {
@@ -192,8 +192,6 @@ in (kdeFrameworks // plasmaMobileGear // plasma5 // plasma5.thirdParty // kdeGea
 
   qoauth = callPackage ../development/libraries/qoauth { };
 
-  qscintilla = callPackage ../development/libraries/qscintilla { };
-
   qt5ct = callPackage ../tools/misc/qt5ct { };
 
   qtdbusextended = callPackage ../development/libraries/qtdbusextended { };
generated by cgit-pink 1.4.1 (git 2.36.1) at 2024-08-20 18:52:00 +0000