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path: root/pkgs/applications/science/biology
AgeCommit message (Expand)AuthorFilesLines
2021-01-24treewide: stdenv.lib -> libPavol Rusnak1-2/+2
2021-01-23mpi: use mpi attribute consistently as the default MPI implementationsMarkus Kowalewski3-11/+12
2021-01-21treewide: editorconfig fixeszowoq2-6/+6
2021-01-20picard-tools: 2.23.9 -> 2.24.0R. RyanTM1-2/+2
2021-01-20ecopcr: use spaces for indentationzowoq1-6/+6
2021-01-20treewide: editorconfig fixeszowoq2-2/+2
2021-01-19treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nixJonathan Ringer5-10/+10
2021-01-19cd-hit: remove non-existent packageJonathan Ringer1-1/+1
2021-01-18delly: 0.8.6 -> 0.8.7R. RyanTM1-2/+2
2021-01-16treewide: stdenv.lib -> libBen Siraphob17-38/+38
2021-01-11treewide: with stdenv.lib; in meta -> with lib;Profpatsch72-142/+142
2021-01-08Merge branch 'master' into staging-nextJan Tojnar1-0/+30
2021-01-07Merge pull request #108432 from jbedo/fastpSandro1-0/+30
2021-01-07Merge branch 'master' into staging-nextJan Tojnar3-6/+6
2021-01-07fastp: init 0.20.1Justin Bedo1-0/+30
2021-01-06Merge pull request #108437 from jbedo/varscanSandro1-3/+3
2021-01-06Merge pull request #108435 from jbedo/lastSandro1-2/+2
2021-01-05varscan: 2.4.2 -> 2.4.4Justin Bedo1-3/+3
2021-01-05last: 1145 -> 1170Justin Bedo1-2/+2
2021-01-04raxml: cleanupSandro Jäckel1-1/+1
2021-01-03Merge staging-next into staginggithub-actions[bot]1-6/+6
2021-01-03Merge pull request #108300 from siraben/parallel-cmakeJohn Ericson9-18/+2
2021-01-03Merge pull request #108251 from prusnak/bowtie2Pavol Rusnak1-6/+6
2021-01-03Merge staging-next into staginggithub-actions[bot]1-0/+25
2021-01-03treewide: remove enableParallelBuilding = true if using cmakeBen Siraphob9-18/+2
2021-01-02bowtie2: 2.3.5.1 -> 2.4.2Pavol Rusnak1-6/+6
2021-01-02bowtie: init at at 1.3.0Pavol Rusnak1-0/+25
2021-01-01treewide: cmake buildInputs to nativeBuildInputs, minor cleanupsBen Siraphob2-2/+3
2020-12-21SPAdes: add python dependencyJustin Bedo1-2/+2
2020-12-14Merge pull request #106856 from jbedo/dellyMario Rodas1-2/+2
2020-12-14delly: 0.8.5 -> 0.8.6Justin Bedo1-2/+2
2020-12-10picard-tools: 2.23.8 -> 2.23.9R. RyanTM1-2/+2
2020-12-02Merge pull request #105672 from r-ryantm/auto-update/hmmerRyan Mulligan1-2/+2
2020-12-02hmmer: 3.3.1 -> 3.3.2R. RyanTM1-2/+2
2020-12-01ants: unbreak on DarwinBen Darwin1-2/+2
2020-11-30bwa: expand supported platformsJustin Bedo1-1/+7
2020-11-28igv: 2.8.12 -> 2.8.13R. RyanTM1-2/+2
2020-11-26Merge pull request #102140 from SuperSandro2000/patch-2Sandro2-8/+14
2020-11-25Merge pull request #98363 from jbedo/mosdepthSandro1-2/+2
2020-11-25tebreak: Fix testsSandro1-1/+7
2020-11-25deeptools: Fix testsSandro1-7/+7
2020-11-23star: 2.7.5c -> 2.7.6aR. RyanTM1-2/+2
2020-11-16Merge pull request #103525 from r-ryantm/auto-update/samblasterRyan Mulligan1-2/+2
2020-11-14Merge pull request #103751 from r-ryantm/auto-update/lastRyan Mulligan1-2/+2
2020-11-13last: 1133 -> 1145R. RyanTM1-2/+2
2020-11-13igv: 2.8.11 -> 2.8.12R. RyanTM1-2/+2
2020-11-12samblaster: 0.1.24 -> 0.1.26R. RyanTM1-2/+2
2020-11-04Merge pull request #102707 from r-ryantm/auto-update/picard-toolsRyan Mulligan1-2/+2
2020-11-04picard-tools: 2.23.4 -> 2.23.8R. RyanTM1-2/+2
2020-11-03Merge pull request #102420 from freezeboy/remove-plinkKevin Cox1-25/+0
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