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path: root/pkgs/applications/science/biology
AgeCommit message (Expand)AuthorFilesLines
2023-11-09bedtools: 2.31.0 -> 2.31.1R. Ryantm1-2/+2
2023-11-08Merge pull request #264872 from r-ryantm/auto-update/lastJustin Bedő1-2/+2
2023-11-05treewide: change pythonForBuild to pythonOnBuildForHostAdam Joseph1-1/+1
2023-11-03Merge pull request #243431 from natsukium/kssd/updateOTABI Tomoya1-15/+34
2023-11-03kssd: enable aarch64-linux support & testsnatsukium1-1/+12
2023-11-03kssd: refactornatsukium1-7/+16
2023-11-03kssd: 1.1 -> 2.21natsukium1-7/+6
2023-11-01last: 1471 -> 1499R. Ryantm1-2/+2
2023-11-01mmseqs2: 14-7e284 -> 15-6f452R. Ryantm1-2/+2
2023-10-28Merge pull request #262311 from scalavision/update-deeptoolsGuillaume Girol1-4/+7
2023-10-28Merge pull request #262697 from natsukium/dssp/updateOTABI Tomoya1-2/+11
2023-10-28Merge pull request #261508 from r-ryantm/auto-update/raxmlWeijia Wang1-2/+2
2023-10-25delly: 1.1.7 -> 1.1.8R. Ryantm1-2/+2
2023-10-22dssp: 4.4.3 -> 4.4.4.1natsukium1-2/+11
2023-10-21Merge pull request #227090 from natsukium/bowtie2/aarch64OTABI Tomoya1-8/+44
2023-10-20Merge pull request #262351 from h7x4/remove-nix-exec-bitsDmitry Kalinkin3-0/+0
2023-10-20treewide: remove execute bit for non-executable `*.nix` filesh7x43-0/+0
2023-10-20Merge pull request #249750 from natsukium/bioawk/initOTABI Tomoya1-0/+50
2023-10-20bowtie2: enable testsnatsukium1-0/+16
2023-10-20bowtie2: fix build on aarch64natsukium1-2/+12
2023-10-20bowtie2: refactornatsukium1-6/+16
2023-10-18deeptools: 3.5.1 -> 3.5.4scalavision1-4/+7
2023-10-16raxml: 8.2.12 -> 8.2.13R. Ryantm1-2/+2
2023-10-14bowtie2: 2.5.1 -> 2.5.2R. Ryantm1-2/+2
2023-10-12Merge pull request #259418 from natsukium/blast-bin/updateOTABI Tomoya1-5/+6
2023-10-07blast-bin: add sourceProvenance to metanatsukium1-0/+1
2023-10-07blast-bin: 2.13.0 -> 2.14.1natsukium1-5/+5
2023-10-07truvari: 4.0.0 -> 4.1.0natsukium1-18/+8
2023-10-07truvari: add meta.changelognatsukium1-0/+1
2023-10-06delly: 1.1.6 -> 1.1.7Justin Bedo1-2/+2
2023-10-01Merge pull request #258254 from r-ryantm/auto-update/nest-mpiWeijia Wang1-2/+2
2023-10-01Merge pull request #257369 from r-ryantm/auto-update/stacksWeijia Wang1-2/+3
2023-10-01stacks: set platformsWeijia Wang1-0/+1
2023-10-01Merge pull request #256805 from r-ryantm/auto-update/neuron-mpiWeijia Wang1-2/+2
2023-09-30nest-mpi: 3.5 -> 3.6R. Ryantm1-2/+2
2023-09-28dssp: 4.4.2 -> 4.4.3natsukium1-5/+7
2023-09-26stacks: 2.62 -> 2.65R. Ryantm1-2/+2
2023-09-25Merge master into staging-nextgithub-actions[bot]1-2/+3
2023-09-24hmmer: add changelog to metaMario Rodas1-0/+1
2023-09-24hmmer: 3.3.2 -> 3.4R. Ryantm1-2/+2
2023-09-23neuron-mpi: 8.2.2 -> 8.2.3R. Ryantm1-2/+2
2023-09-22Merge master into staging-nextgithub-actions[bot]1-0/+66
2023-09-22trimmomatic: init at 0.39László Kupcsik1-0/+66
2023-09-19Merge master into staging-nextgithub-actions[bot]1-2/+2
2023-09-19mosdepth: 0.3.4 -> 0.3.5R. Ryantm1-2/+2
2023-09-18Merge master into staging-nextgithub-actions[bot]1-2/+2
2023-09-16blast: 2.14.0 -> 2.14.1R. Ryantm1-2/+2
2023-09-14Merge remote-tracking branch 'origin/staging-next' into stagingAlyssa Ross1-1/+23
2023-09-13Merge pull request #250309 from trofi/angsd-fix-parallelMario Rodas1-1/+23
2023-09-12Merge staging-next into staginggithub-actions[bot]1-2/+2
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