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2024-05-16iqtree: 2.3.2 -> 2.3.4R. Ryantm1-2/+2
2024-05-14conglomerate: unstable-2017-09-10 -> unstable-2023-01-19Raghav Sood1-3/+3
2024-05-14conglomerate: nixfmt-rfc-style and modernizationRaghav Sood1-14/+46
2024-05-12Merge pull request #308490 from natsukium/migrate/updateOTABI Tomoya1-10/+24
2024-05-06Merge pull request #309432 from r-ryantm/auto-update/messer-slimNick Cao1-2/+2
2024-05-06Merge pull request #308676 from natsukium/dssp/updateOTABI Tomoya1-22/+3
2024-05-06messer-slim: 4.2.1 -> 4.2.2R. Ryantm1-2/+2
2024-05-04Merge pull request #306674 from r-ryantm/auto-update/jbrowseWeijia Wang1-2/+2
2024-05-03dssp: 4.4.5 -> 4.4.7natsukium1-22/+3
2024-05-02migrate: refactornatsukium1-6/+6
2024-05-02migrate: add meta.mainProgramnatsukium1-0/+1
2024-05-02migrate: 3.7.2 -> 5.0.6natsukium1-3/+3
2024-05-02migrate: format with nixfmtnatsukium1-3/+16
2024-05-02Merge branch 'master' into staging-nextVladimír Čunát1-2/+2
2024-05-01last: 1542 -> 1543 (#307730)R. RyanTM1-2/+2
2024-05-01Merge master into staging-nextgithub-actions[bot]1-2/+2
2024-05-01igv: 2.17.3 -> 2.17.4R. Ryantm1-2/+2
2024-05-01Merge branch 'master' into staging-nextK9001-7/+6
2024-04-29seqtk: fix cross compilation, drop custom installPhaseNick Cao1-7/+6
2024-04-28Merge master into staging-nextgithub-actions[bot]1-16/+42
2024-04-28mafft: enable simple testnatsukium1-0/+20
2024-04-28mafft: prettifynatsukium1-15/+21
2024-04-28mafft: 7.525 -> 7.526natsukium1-2/+2
2024-04-27treewide: wrapGAppsHook → wrapGAppsHook3Jan Tojnar2-3/+3
2024-04-25Merge pull request #305974 from onny/rocksdb-updateYt1-2/+13
2024-04-25jbrowse: 2.5.0 -> 2.11.0R. Ryantm1-2/+2
2024-04-24treewide: unbreak appimageTools.wrapType2 buildsPeder Bergebakken Sundt1-3/+1
2024-04-22treewide: switch from rocksdb -> rocksdb_8_3Jonas Heinrich1-2/+13
2024-04-20nest: fix hashWeijia Wang1-1/+1
2024-04-19Merge branch 'master' into staging-nextVladimír Čunát1-2/+2
2024-04-18Merge pull request #303357 from r-ryantm/auto-update/iqtreeWeijia Wang1-2/+2
2024-04-17Merge master into staging-nextgithub-actions[bot]1-2/+2
2024-04-17Merge pull request #304395 from r-ryantm/auto-update/bcftoolsAleksana1-2/+2
2024-04-16Merge master into staging-nextgithub-actions[bot]1-2/+2
2024-04-16Merge pull request #303754 from r-ryantm/auto-update/messer-slimWeijia Wang1-2/+2
2024-04-16bcftools: 1.19 -> 1.20R. Ryantm1-2/+2
2024-04-16Merge master into staging-nextgithub-actions[bot]1-2/+2
2024-04-13messer-slim: 4.2 -> 4.2.1R. Ryantm1-2/+2
2024-04-12python311Packages.nest: 3.6 -> 3.7R. Ryantm1-2/+2
2024-04-12Merge master into staging-nextgithub-actions[bot]1-2/+2
2024-04-12Merge pull request #301677 from r-ryantm/auto-update/minimap2Weijia Wang1-2/+2
2024-04-11iqtree: 2.3.1 -> 2.3.2R. Ryantm1-2/+2
2024-04-09Merge branch 'staging-next' into stagingWeijia Wang1-2/+2
2024-04-07seqkit: 2.8.0 -> 2.8.1R. Ryantm1-2/+2
2024-04-04minimap2: 2.27 -> 2.28R. Ryantm1-2/+2
2024-03-28Merge pull request #299223 from NixOS/python-updatesMartin Weinelt1-1/+1
2024-03-27python312Packages.cython: 0.29.36 -> 3.0.9Martin Weinelt1-1/+1
2024-03-26iqtree: 2.2.2.7 -> 2.3.1R. Ryantm1-2/+2
2024-03-22messer-slim: 4.1 -> 4.2R. Ryantm1-2/+2
2024-03-21treewide: remove licenses.agpl3Jussi Kuokkanen1-1/+1
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