Age | Commit message (Collapse) | Author | Files | Lines | |
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2023-05-22 | Merge pull request #233441 from evils/kicad | pennae | 1 | -3/+13 | |
kicad: make KICAD7_TEMPLATE_DIR a single path | |||||
2023-05-22 | kicad: make KICAD7_TEMPLATE_DIR a single path | Evils | 1 | -3/+13 | |
workaround for the upstream issue of not searching a : separated path | |||||
2023-05-22 | Merge pull request #233336 from smancill/shogun-fix-build | Ryan Lahfa | 2 | -14/+51 | |
shogun: fix build | |||||
2023-05-22 | Merge pull request #218014 from collares/singular431p3 | Sandro | 15 | -623/+181 | |
2023-05-22 | iqtree: set platforms | Weijia Wang | 1 | -2/+10 | |
2023-05-22 | iqtree: 2.2.0.4 -> 2.2.2.4 | R. Ryantm | 1 | -2/+2 | |
2023-05-21 | shogun: disable broken test | Sebastián Mancilla | 1 | -0/+2 | |
Shogun has been broken for a while [0]. Looks like the latest update to openblas, by f07a0615ea8 (openblas: 0.3.20 -> 0.3.21, 2022-08-10), broke the `libshogun-mathematics_lapack` example. It calculates the eigenvectors for a matrix, but the assertions now fail: compute_eigenvectors A=[ [ -0.500000000000000111, 0.707106781186547351, 0.5], [ 0.707106781186547351, 1.04083408558608426e-16, 0.707106781186547129], [ -0.499999999999999722, -0.707106781186547462, 0.5] ] eigenvalues=[-1.41421356237309492,1.04083408558608426e-17,1.41421356237309492] terminate called after throwing an instance of 'shogun::ShogunException' The darwin build output shows a bit more detail: assertion is_equal(A(0,0), 0.5, eps) failed in void test_ev() file /tmp/nix-build-shogun-6.1.4.drv-0/source/examples/undocumented/libshogun/mathematics_lapack.cpp line 49 Disable the test to fix the build, although the results seem "correct". It appears that openblas now calculates values with slightly less precision, thus the assertion fails due to the expected epsilon. [0]: https://hydra.nixos.org/build/194671473 | |||||
2023-05-21 | shogun: disable tests that take too long | Sebastián Mancilla | 1 | -0/+4 | |
The checkPhase may take from 30 minutes up to 2 hours and 30 minutes on Hydra due to these tests: [...] 311/375 Test #311: libshogun-evaluation_cross_validation_classification ............ Passed 247.33 sec 312/375 Test #313: libshogun-evaluation_cross_validation_mkl_weight_storage ........ Passed 428.31 sec 315/375 Test #312: libshogun-evaluation_cross_validation_locked_comparison ......... Passed 880.44 sec 341/375 Test #316: libshogun-evaluation_cross_validation_regression ................ Passed 380.48 sec 342/375 Test #343: libshogun-modelselection_grid_search_kernel ..................... Passed 4866.85 sec 343/375 Test #344: libshogun-modelselection_grid_search_linear ..................... Passed 574.78 sec 345/375 Test #342: libshogun-modelselection_combined_kernel_sub_parameters ......... Passed 5929.90 sec 375/375 Test #346: libshogun-modelselection_grid_search_multiclass_svm ............. Passed 1826.27 sec [...] Total Test time (real) = 9046.65 sec checkPhase completed in 2 hours 30 minutes 47 seconds | |||||
2023-05-21 | shogun: fix compiler warnings | Sebastián Mancilla | 2 | -0/+27 | |
Fix warnings related to virtual destruction. Kinda important to fix. | |||||
2023-05-21 | shogun: refactor derivation | Sebastián Mancilla | 1 | -14/+18 | |
2023-05-21 | sageWithDoc: run src/doc/bootstrap script before docbuild | Mauricio Collares | 2 | -17/+21 | |
2023-05-21 | sage: 9.8 -> 10.0 | Mauricio Collares | 9 | -464/+130 | |
2023-05-21 | giac, giac-with-xcas: 1.9.0-29 -> 1.9.0-43 | Mauricio Collares | 2 | -10/+24 | |
2023-05-20 | singular: 4.3.1p2 -> 4.3.2p1 | Mauricio Collares | 1 | -4/+3 | |
2023-05-20 | pari: 2.15.2 -> 2.15.3 | Mauricio Collares | 1 | -6/+7 | |
2023-05-20 | maxima-ecl-5_45: remove | Mauricio Collares | 1 | -126/+0 | |
2023-05-19 | pkgs: fix typos | figsoda | 1 | -1/+1 | |
2023-05-20 | Merge pull request #232767 from r-ryantm/auto-update/dataexplorer | Weijia Wang | 1 | -2/+2 | |
dataexplorer: 3.7.6 -> 3.7.7 | |||||
2023-05-19 | dataexplorer: 3.7.6 -> 3.7.7 | R. Ryantm | 1 | -2/+2 | |
2023-05-18 | Merge pull request #232547 from r-ryantm/auto-update/cytoscape | Nick Cao | 1 | -2/+2 | |
cytoscape: 3.9.1 -> 3.10.0 | |||||
2023-05-19 | Merge pull request #232477 from fabaff/strictdoc-fix | Sandro | 2 | -61/+32 | |
strictdoc: 0.0.26 -> 0.0.40 | |||||
2023-05-18 | cytoscape: 3.9.1 -> 3.10.0 | R. Ryantm | 1 | -2/+2 | |
2023-05-18 | Merge pull request #231635 from natsukium/bwa/build-on-aarch64 | Weijia Wang | 1 | -18/+14 | |
bwa: 0.7.17 -> unstable-2022-09-23 | |||||
2023-05-17 | isabelle-components.isabelle-linter: add platforms | Weijia Wang | 1 | -0/+1 | |
2023-05-17 | strictdoc: 0.0.26 -> 0.0.40 | Fabian Affolter | 2 | -61/+32 | |
2023-05-17 | isabelle-linter: unstable-2022-09-05 -> 1.2.1 | Andreas Vollert | 1 | -3/+3 | |
2023-05-17 | Merge pull request #229008 from whonore/dafny-4 | Guillaume Maudoux | 2 | -0/+245 | |
dafny: 2.3.0 -> 4.0.0 | |||||
2023-05-16 | Merge pull request #232217 from r-ryantm/auto-update/primesieve | Weijia Wang | 1 | -2/+2 | |
primesieve: 11.0 -> 11.1 | |||||
2023-05-16 | primesieve: 11.0 -> 11.1 | R. Ryantm | 1 | -2/+2 | |
2023-05-16 | Merge pull request #232076 from nagy/betaflight | Nick Cao | 1 | -0/+7 | |
betaflight-configurator: reduce size | |||||
2023-05-16 | Merge pull request #231826 from mweinelt/scikitimage-alias | Martin Weinelt | 1 | -1/+1 | |
python310Packages.scikit-image: rename from scikitimage | |||||
2023-05-15 | betaflight-configurator: reduce size | Daniel Nagy | 1 | -0/+7 | |
This reduces the size of the output from 512.5M to 233.9M. | |||||
2023-05-15 | fritzing: added meta.mainProgram (#232059) | Rabjerg | 1 | -0/+1 | |
2023-05-15 | Merge pull request #231975 from jbedo/fastp | Nick Cao | 1 | -2/+2 | |
fastp: 0.23.2 -> 0.23.3 | |||||
2023-05-15 | bwa: add runHook | natsukium | 1 | -0/+4 | |
2023-05-15 | bwa: update license | natsukium | 1 | -1/+1 | |
2023-05-15 | bwa: 0.7.17 -> unstable-2022-09-23 | natsukium | 1 | -17/+9 | |
Diff: https://github.com/lh3/bwa/compare/v0.7.17...139f68fc4c3747813783a488aef2adc86626b01b | |||||
2023-05-15 | Merge pull request #231598 from natsukium/truvari/disable-tests-darwin | Ryan Lahfa | 1 | -0/+14 | |
truvari: disable some tests on darwin | |||||
2023-05-15 | fastp: 0.23.2 -> 0.23.3 | Justin Bedo | 1 | -2/+2 | |
2023-05-15 | truvari: add patches to fix `truvari anno` | natsukium | 1 | -0/+14 | |
2023-05-14 | Merge pull request #231516 from benwbooth/jbrowse | Sandro | 1 | -0/+39 | |
jbrowse: init at 2.5.0 | |||||
2023-05-14 | python310Packages.scikit-image: rename from scikitimage | Martin Weinelt | 1 | -1/+1 | |
to match the pname and create an alias for the former name. | |||||
2023-05-13 | antiprism: 0.29 -> 0.30 | R. Ryantm | 1 | -2/+2 | |
2023-05-13 | eigenmath: unstable-2023-04-07 -> unstable-2023-05-12 | Nick Cao | 1 | -3/+3 | |
2023-05-13 | Merge pull request #231413 from pmiddend/crystfel-dependencies-update | Nick Cao | 1 | -7/+7 | |
crystfel: update dependencies | |||||
2023-05-12 | jbrowse: init at 2.5.0 | Ben Booth | 1 | -0/+39 | |
2023-05-12 | wxmacmolplt: fix typo | Markus Kowalewski | 1 | -1/+1 | |
2023-05-12 | crystfel: update dependencies | Philipp Middendorf | 1 | -7/+7 | |
2023-05-11 | Merge pull request #231063 from Luflosi/update/boinc | Jonas Heinrich | 1 | -2/+2 | |
boinc: 7.22.0 -> 7.22.1 | |||||
2023-05-11 | Merge pull request #231066 from jbedo/subread | Jonas Heinrich | 1 | -2/+2 | |
subread: 2.0.5 -> 2.0.6 |