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2023-04-30Merge pull request #226447 from savyajha/radian-wrapper-fixJustin Bedő1-3/+3
radianWrapper: Explicitly set R_HOME and always have R in buildInputs
2023-04-29radianWrapper: Explicitly set R_HOME and always have R in buildInputsSavyasachee Jha1-3/+3
Before this commit, `wrapR = false` (the default) would lead to situations where the `RHOME` variable would not be found. Adding `--set R_HOME ${R}/lib/R` so that the wrapper explicitly exports `R_HOME` fixes this issue. In addition, R is also made part of `buildInputs` by default so that package loading works correctly.
2023-04-26rPackages.textshaping: fix build on darwinWeijia Wang1-0/+4
2023-04-06rPackages: CRAN and BioC updateJustin Bedo2-182/+201
2023-04-05rPackages: regenerate CRAN hashesJustin Bedo1-3473/+3587
2023-04-05rPackages: switch to official CRAN mirrorsJustin Bedo3-11/+11
2023-03-24rPackages.Rhdf5lib: enable cxx bindingsJustin Bedo1-3/+6
2023-03-23rPackages.Rhdflib: patch linking flagsJustin Bedo1-7/+58
2023-03-22rPackages.rhdf5: fix buildJustin Bedo2-0/+49
use nixpkgs provided hdf5 instead of vendored library
2023-03-22rPackages.rhdf5filters: fix buildJustin Bedo2-1/+52
- use hdf5-blosc from nixpkgs to fix failing vendored build - add missing build dependencies
2023-03-22rPackages.Rhdf5lib: fix buildJustin Bedo2-2/+32
use nixpkgs provided hdf5 and libaec to resolve failing vendored code
2023-03-16rPackages.purrr: patch configure shebangJustin Bedo1-0/+4
2023-03-16rPackages: CRAN and BioC updateJustin Bedo4-2827/+3321
2023-03-10Merge pull request #217517 from savyajha/radianSandro1-0/+37
2023-03-08Merge pull request #219439 from nviets/sparklyrJustin Bedő1-0/+11
rPackages: sparklyr environment variables
2023-03-07Replacing MRAN mirror with positNathan Viets3-4/+7
2023-03-07Update pkgs/development/r-modules/default.nixnviets1-1/+1
Co-authored-by: Justin Bedő <cu@cua0.org>
2023-03-06This PR sets default SPARK_HOME and JAVA_HOME for R's sparklyr package using ↵nviets1-0/+11
a patch in .onload. Preset value take precedence. SPARK_HOME points to python3Packages.pyspark rather than pkgs.spark because the former is actively maintained.
2023-03-05python310Packages.radian: init at 0.6.4 and provide radianWrapperSavyasachee Jha1-0/+37
2023-02-24r-modules: fix evalK9001-2/+2
Not sure how this worked before. Now it at least evals.
2023-02-23rPackages: s/overrideDerivation/overrideAttrsArtturin1-69/+74
and attrs.NIX_CFLAGS_COMPILE to attrs.env.NIX_CFLAGS_COMPILE https://nixos.org/manual/nixpkgs/stable/#sec-pkg-overrideDerivation > Do not use this function in Nixpkgs as it evaluates a Derivation before modifying it, which breaks package abstraction and removes error-checking of function arguments
2023-02-22treewide: move NIX_CFLAGS_COMPILE to the env attrsetArtturin2-4/+4
with structuredAttrs lists will be bash arrays which cannot be exported which will be a issue with some patches and some wrappers like cc-wrapper this makes it clearer that NIX_CFLAGS_COMPILE must be a string as lists in env cause a eval failure
2023-02-17rPackages.quarto: add quarto dependencynviets1-0/+7
2023-02-07Merge pull request #212537 from nviets/nanonextJustin Bedő1-0/+1
nng: 1.5.2 -> 1.6.0-prerelease and to rPackages.nanonext dependencies
2023-02-06nng: 1.5.2 -> 1.6.0-prerelease and rPackages.nanonext dependencyNathan Viets1-0/+1
2023-02-07rPackages: added libiconv to darwin builds and removed redundant package ↵Nathan Viets2-35/+4
level calls
2023-01-06rPackages.classInt: add libiconv dependency to fix build on darwinChris Warburton1-0/+1
Avoids 'ld: library not found for -liconv' on x86_64-darwin
2022-12-15rPackages: CRAN and BioC updateJustin Bedo4-4166/+4489
2022-12-06Merge pull request #204684 from trofi/rPackages.devEMF-without-xlibsWrapperJustin Bedő1-1/+1
rPackages.devEMF: use xorg.* packages directly instead of xlibsWrappe…
2022-12-06Merge pull request #204550 from trofi/rPackages.imager-without-xlibsWrapperJustin Bedő1-1/+1
rPackages.imager: use xorg.* packages directly instead of xlibsWrappe…
2022-12-05rPackages.Cairo: use xorg.* packages directly instead of xlibsWrapper ↵Sergei Trofimovich1-1/+1
indirection Validated as no change in `out` output with `diffoscope`.
2022-12-05rPackages.devEMF: use xorg.* packages directly instead of xlibsWrapper ↵Sergei Trofimovich1-1/+1
indirection Validated as no change in `out` output with `diffoscope`.
2022-12-04rPackages.imager: use xorg.* packages directly instead of xlibsWrapper ↵Sergei Trofimovich1-1/+1
indirection Validated as no change in `out` output with `diffoscope`.
2022-12-04rPackages.rgl: use xorg.* packages directly instead of xlibsWrapper indirectionSergei Trofimovich1-1/+1
Validated as no change in `out` output with `diffoscope`.
2022-11-24rPackages.bigmemory: fix evaluation on darwinMario Rodas1-1/+1
On Darwin pkgs.libuuid is null, hence evaluating `.dev` fails.
2022-11-02rPackages.RNifti: fix buildJustin Bedo2-37/+0
2022-11-02rPackages.bigmemory: add missing dependencyJustin Bedo1-0/+1
2022-10-31rPackages: CRAN and BioC updateJustin Bedo3-2668/+3186
2022-10-23Merge pull request #196979 from Et7f3/fix-deldirJustin Bedő1-0/+2
deldir: specify iconv library for darwin.
2022-10-21rPackages.interp: specify iconv library for darwinEt7f31-0/+1
2022-10-20rPackages.deldir: specify iconv library for darwinEt7f31-0/+1
2022-10-20rPackages.mzR: unpin boostNicolas Benes1-1/+1
`mzR` currently ships and builds its own copy of boost-176, see https://github.com/sneumann/mzR/blob/master/src/README.updateboost
2022-09-30rPackages.rmarkdown: add pandoc as buildInputMatthieu Coudron1-0/+1
https://github.com/rstudio/rmarkdown/blob/main/DESCRIPTION#L91 requires pandoc from system
2022-09-04rPackages: reenable stackprotector on aarch64-darwinTheodore Ni1-2/+0
The original error that required disabling the stack protector on aarch64-darwin has been fixed in GCC.
2022-08-22rPackages.s2: fix openssl linkingJustin Bedo1-0/+5
2022-08-18rPackages: CRAN and BioC updateJustin Bedo4-1517/+1702
2022-07-02rPackages: CRAN and BioC updateJustin Bedo4-2168/+2427
2022-06-18rPackages.gifski: fix buildhqurve1-0/+16
2022-05-17rPackages: CRAN and BioC updateJustin Bedo3-3756/+3883
2022-05-15rPackages.Rhdf5lib: propagate hdf5 dependencyJustin Bedo1-0/+4
Packages that depend on Rhdf5lib also require the dev hdf5 outputs for correct functionality.
generated by cgit-pink 1.4.1 (git 2.36.1) at 2024-07-05 04:47:12 +0000