1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
|
import ./make-test-python.nix ({ lib, pkgs, ... }:
let
slurmconfig = {
services.slurm = {
controlMachine = "control";
nodeName = [ "node[1-3] CPUs=1 State=UNKNOWN" ];
partitionName = [ "debug Nodes=node[1-3] Default=YES MaxTime=INFINITE State=UP" ];
extraConfig = ''
AccountingStorageHost=dbd
AccountingStorageType=accounting_storage/slurmdbd
'';
};
environment.systemPackages = [ mpitest ];
networking.firewall.enable = false;
systemd.tmpfiles.rules = [
"f /etc/munge/munge.key 0400 munge munge - mungeverryweakkeybuteasytointegratoinatest"
];
};
mpitest = let
mpitestC = pkgs.writeText "mpitest.c" ''
#include <stdio.h>
#include <stdlib.h>
#include <mpi.h>
int
main (int argc, char *argv[])
{
int rank, size, length;
char name[512];
MPI_Init (&argc, &argv);
MPI_Comm_rank (MPI_COMM_WORLD, &rank);
MPI_Comm_size (MPI_COMM_WORLD, &size);
MPI_Get_processor_name (name, &length);
if ( rank == 0 ) printf("size=%d\n", size);
printf ("%s: hello world from process %d of %d\n", name, rank, size);
MPI_Finalize ();
return EXIT_SUCCESS;
}
'';
in pkgs.runCommand "mpitest" {} ''
mkdir -p $out/bin
${pkgs.openmpi}/bin/mpicc ${mpitestC} -o $out/bin/mpitest
'';
in {
name = "slurm";
meta.maintainers = [ lib.maintainers.markuskowa ];
nodes =
let
computeNode =
{ ...}:
{
imports = [ slurmconfig ];
# TODO slurmd port and slurmctld port should be configurations and
# automatically allowed by the firewall.
services.slurm = {
client.enable = true;
};
};
in {
control =
{ ...}:
{
imports = [ slurmconfig ];
services.slurm = {
server.enable = true;
};
};
submit =
{ ...}:
{
imports = [ slurmconfig ];
services.slurm = {
enableStools = true;
};
};
dbd =
{ pkgs, ... } :
let
passFile = pkgs.writeText "dbdpassword" "password123";
in {
networking.firewall.enable = false;
systemd.tmpfiles.rules = [
"f /etc/munge/munge.key 0400 munge munge - mungeverryweakkeybuteasytointegratoinatest"
];
services.slurm.dbdserver = {
enable = true;
storagePassFile = "${passFile}";
};
services.mysql = {
enable = true;
package = pkgs.mariadb;
initialScript = pkgs.writeText "mysql-init.sql" ''
CREATE USER 'slurm'@'localhost' IDENTIFIED BY 'password123';
GRANT ALL PRIVILEGES ON slurm_acct_db.* TO 'slurm'@'localhost';
'';
ensureDatabases = [ "slurm_acct_db" ];
ensureUsers = [{
ensurePermissions = { "slurm_acct_db.*" = "ALL PRIVILEGES"; };
name = "slurm";
}];
settings.mysqld = {
# recommendations from: https://slurm.schedmd.com/accounting.html#mysql-configuration
innodb_buffer_pool_size="1024M";
innodb_log_file_size="64M";
innodb_lock_wait_timeout=900;
};
};
};
node1 = computeNode;
node2 = computeNode;
node3 = computeNode;
};
testScript =
''
start_all()
# Make sure DBD is up after DB initialzation
with subtest("can_start_slurmdbd"):
dbd.succeed("systemctl restart slurmdbd")
dbd.wait_for_unit("slurmdbd.service")
dbd.wait_for_open_port(6819)
# there needs to be an entry for the current
# cluster in the database before slurmctld is restarted
with subtest("add_account"):
control.succeed("sacctmgr -i add cluster default")
# check for cluster entry
control.succeed("sacctmgr list cluster | awk '{ print $1 }' | grep default")
with subtest("can_start_slurmctld"):
control.succeed("systemctl restart slurmctld")
control.wait_for_unit("slurmctld.service")
with subtest("can_start_slurmd"):
for node in [node1, node2, node3]:
node.succeed("systemctl restart slurmd.service")
node.wait_for_unit("slurmd")
# Test that the cluster works and can distribute jobs;
with subtest("run_distributed_command"):
# Run `hostname` on 3 nodes of the partition (so on all the 3 nodes).
# The output must contain the 3 different names
submit.succeed("srun -N 3 hostname | sort | uniq | wc -l | xargs test 3 -eq")
with subtest("check_slurm_dbd"):
# find the srun job from above in the database
control.succeed("sleep 5")
control.succeed("sacct | grep hostname")
with subtest("run_PMIx_mpitest"):
submit.succeed("srun -N 3 --mpi=pmix mpitest | grep size=3")
'';
})
|