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{ buildPythonPackage
, cloudpickle
, crcmod
, cython
, dill
, fastavro
, fasteners
, fetchFromGitHub
, fetchpatch
, freezegun
, grpcio
, grpcio-tools
, hdfs
, httplib2
, hypothesis
, lib
, mock
, mypy-protobuf
, numpy
, objsize
, orjson
, pandas
, parameterized
, proto-plus
, protobuf
, psycopg2
, pyarrow
, pydot
, pyhamcrest
, pymongo
, pytest-xdist
, pytestCheckHook
, python
, python-dateutil
, pythonRelaxDepsHook
, pytz
, pyyaml
, regex
, requests
, requests-mock
, scikit-learn
, sqlalchemy
, tenacity
, testcontainers
, typing-extensions
, zstandard
}:
buildPythonPackage rec {
pname = "apache-beam";
version = "2.45.0";
src = fetchFromGitHub {
owner = "apache";
repo = "beam";
rev = "refs/tags/v${version}";
hash = "sha256-e+6Vt+SlOxi16udsdx7WFoDWYupuXhggpoEZPe4tPr0=";
};
patches = [
(fetchpatch {
# https://github.com/apache/beam/pull/24143
name = "fix-for-dill-0.3.6.patch";
url = "https://github.com/apache/beam/commit/7e014435b816015d21cc07f3f6c80809f3d8023d.patch";
hash = "sha256-iUmnzrItTFM98w3mpadzrmtI3t0fucpSujAg/6qxCGk=";
stripLen = 2;
})
];
pythonRelaxDeps = [
# See https://github.com/NixOS/nixpkgs/issues/156957
"dill"
"numpy"
"pymongo"
# See https://github.com/NixOS/nixpkgs/issues/193613
"protobuf"
# As of apache-beam v2.45.0, the requirement is httplib2>=0.8,<0.21.0, but
# the current (2023-02-08) nixpkgs's httplib2 version is 0.21.0. This can be
# removed once beam is upgraded since the current requirement on master is
# for httplib2>=0.8,<0.22.0.
"httplib2"
# As of apache-beam v2.45.0, the requirement is pyarrow<10.0.0,>=0.15.1, but
# the current (2023-02-22) nixpkgs's pyarrow version is 11.0.0.
"pyarrow"
];
sourceRoot = "source/sdks/python";
nativeBuildInputs = [
cython
grpcio-tools
mypy-protobuf
pythonRelaxDepsHook
];
propagatedBuildInputs = [
cloudpickle
crcmod
dill
fastavro
fasteners
grpcio
hdfs
httplib2
numpy
objsize
orjson
proto-plus
protobuf
pyarrow
pydot
pymongo
python-dateutil
pytz
regex
requests
typing-extensions
zstandard
];
enableParallelBuilding = true;
pythonImportsCheck = [
"apache_beam"
];
checkInputs = [
freezegun
hypothesis
mock
pandas
parameterized
psycopg2
pyhamcrest
pytestCheckHook
pytest-xdist
pyyaml
requests-mock
scikit-learn
sqlalchemy
tenacity
testcontainers
];
# Make sure we're running the tests for the actually installed
# package, so that cython's .so files are available.
preCheck = "cd $out/lib/${python.libPrefix}/site-packages";
disabledTestPaths = [
# Fails with
# _______ ERROR collecting apache_beam/io/external/xlang_jdbcio_it_test.py _______
# apache_beam/io/external/xlang_jdbcio_it_test.py:80: in <module>
# class CrossLanguageJdbcIOTest(unittest.TestCase):
# apache_beam/io/external/xlang_jdbcio_it_test.py:99: in CrossLanguageJdbcIOTest
# container_init: Callable[[], Union[PostgresContainer, MySqlContainer]],
# E NameError: name 'MySqlContainer' is not defined
#
"apache_beam/io/external/xlang_jdbcio_it_test.py"
# These tests depend on the availability of specific servers backends.
"apache_beam/runners/portability/flink_runner_test.py"
"apache_beam/runners/portability/samza_runner_test.py"
"apache_beam/runners/portability/spark_runner_test.py"
# Fails starting from dill 0.3.6 because it tries to pickle pytest globals:
# https://github.com/uqfoundation/dill/issues/482#issuecomment-1139017499.
"apache_beam/transforms/window_test.py"
# See https://github.com/apache/beam/issues/25390.
"apache_beam/coders/slow_coders_test.py"
"apache_beam/dataframe/pandas_doctests_test.py"
"apache_beam/typehints/typed_pipeline_test.py"
"apache_beam/coders/fast_coders_test.py"
"apache_beam/dataframe/schemas_test.py"
];
disabledTests = [
# The reasons of failures for these tests are unclear.
# They reproduce in Docker with Ubuntu 22.04
# (= they're not `nixpkgs`-specific) but given the upstream uses
# quite elaborate testing infra with containers and multiple
# different runners - I don't expect them to help debugging these
# when running via our (= custom from their PoV) testing infra.
"test_with_main_session"
# AssertionErrors
"test_unified_repr"
"testDictComprehension"
"testDictComprehensionSimple"
"testGenerator"
"testGeneratorComprehension"
"testListComprehension"
"testNoneReturn"
"testSet"
"testTupleListComprehension"
"test_newtype"
"test_pardo_type_inference"
"test_get_output_batch_type"
"test_pformat_namedtuple_with_unnamed_fields"
"test_row_coder_fail_early_bad_schema"
];
meta = with lib; {
description = "Unified model for defining both batch and streaming data-parallel processing pipelines";
homepage = "https://beam.apache.org/";
license = licenses.asl20;
maintainers = with maintainers; [ ndl ];
};
}
|
