1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
|
{
lib,
stdenv,
anytree,
buildPythonPackage,
cached-property,
cgen,
click,
codepy,
distributed,
fetchFromGitHub,
gcc,
llvmPackages,
matplotlib,
multidict,
nbval,
psutil,
py-cpuinfo,
pytest-xdist,
pytestCheckHook,
pythonOlder,
scipy,
sympy,
}:
buildPythonPackage rec {
pname = "devito";
version = "4.8.10";
format = "setuptools";
disabled = pythonOlder "3.8";
src = fetchFromGitHub {
owner = "devitocodes";
repo = "devito";
rev = "refs/tags/v${version}";
hash = "sha256-n8mbhbW5zN8hQeVF6T3MbET9tJlIy99iwFiZCOh6xTg=";
};
pythonRemoveDeps = [
"codecov"
"flake8"
"pytest-runner"
"pytest-cov"
];
pythonRelaxDeps = true;
dependencies = [
anytree
cached-property
cgen
click
codepy
distributed
nbval
multidict
psutil
py-cpuinfo
scipy
sympy
] ++ lib.optionals stdenv.cc.isClang [ llvmPackages.openmp ];
nativeCheckInputs = [
gcc
matplotlib
pytest-xdist
pytestCheckHook
];
pytestFlagsArray = [ "-x" ];
# I've had to disable the following tests since they fail while using nix-build, but they do pass
# outside the build. They mostly related to the usage of MPI in a sandboxed environment.
disabledTests =
[
"test_assign_parallel"
"test_cache_blocking_structure_distributed"
"test_codegen_quality0"
"test_coefficients_w_xreplace"
"test_docstrings"
"test_docstrings[finite_differences.coefficients]"
"test_gs_parallel"
"test_if_halo_mpi"
"test_if_parallel"
"test_index_derivative"
"test_init_omp_env_w_mpi"
"test_loop_bounds_forward"
"test_min_max_mpi"
"test_mpi"
"test_mpi_nocomms"
"test_new_distributor"
"test_setupWOverQ"
"test_shortcuts"
"test_stability_mpi"
"test_subdomainset_mpi"
"test_subdomains_mpi"
]
++ lib.optionals (stdenv.isLinux && stdenv.isAarch64) [
# FAILED tests/test_unexpansion.py::Test2Pass::test_v0 - assert False
"test_v0"
]
++ lib.optionals stdenv.isDarwin [
# FAILED tests/test_caching.py::TestCaching::test_special_symbols - ValueError: not enough values to unpack (expected 3, got 2)
"test_special_symbols"
# FAILED tests/test_unexpansion.py::Test2Pass::test_v0 - codepy.CompileError: module compilation failed
"test_v0"
]
++ lib.optionals (stdenv.isDarwin && stdenv.isAarch64) [
# Numerical tests
"test_lm_fb"
"test_lm_ds"
];
disabledTestPaths =
[
"tests/test_pickle.py"
"tests/test_benchmark.py"
"tests/test_mpi.py"
"tests/test_autotuner.py"
"tests/test_data.py"
"tests/test_dse.py"
"tests/test_gradient.py"
]
++ lib.optionals ((stdenv.isLinux && stdenv.isAarch64) || stdenv.isDarwin) [ "tests/test_dle.py" ];
pythonImportsCheck = [ "devito" ];
meta = {
description = "Code generation framework for automated finite difference computation";
homepage = "https://www.devitoproject.org/";
changelog = "https://github.com/devitocodes/devito/releases/tag/v${version}";
license = lib.licenses.mit;
maintainers = with lib.maintainers; [ atila ];
};
}
|
