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{
lib,
buildPythonPackage,
fetchFromGitHub,
hatchling,
hatch-vcs,
numpy,
scipy,
pytestCheckHook,
pytest-timeout,
matplotlib,
decorator,
jinja2,
pooch,
tqdm,
packaging,
lazy-loader,
h5io,
pymatreader,
pythonOlder,
}:
buildPythonPackage rec {
pname = "mne-python";
version = "1.7.0";
pyproject = true;
disabled = pythonOlder "3.9";
src = fetchFromGitHub {
owner = "mne-tools";
repo = "mne-python";
rev = "refs/tags/v${version}";
hash = "sha256-Nrar6Iw/jROuo4QTI7TktJSR5IdPSOQcbR+lycH52LI=";
};
postPatch = ''
substituteInPlace pyproject.toml \
--replace-fail "--cov-report=" "" \
--replace-fail "--cov-branch" ""
'';
nativeBuildInputs = [
hatchling
hatch-vcs
];
propagatedBuildInputs = [
numpy
scipy
matplotlib
tqdm
pooch
decorator
packaging
jinja2
lazy-loader
];
passthru.optional-dependencies.hdf5 = [
h5io
pymatreader
];
nativeCheckInputs = [
pytestCheckHook
pytest-timeout
] ++ lib.flatten (builtins.attrValues passthru.optional-dependencies);
preCheck = ''
export HOME=$(mktemp -d)
export MNE_SKIP_TESTING_DATASET_TESTS=true
export MNE_SKIP_NETWORK_TESTS=1
'';
pythonImportsCheck = [ "mne" ];
meta = with lib; {
description = "Magnetoencephelography and electroencephalography in Python";
mainProgram = "mne";
homepage = "https://mne.tools";
changelog = "https://mne.tools/stable/changes/v${version}.html";
license = licenses.bsd3;
maintainers = with maintainers; [
bcdarwin
mbalatsko
];
};
}
|
