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{
lib,
buildPythonPackage,
pythonOlder,
fetchFromGitHub,
# build-system
setuptools,
# dependencies
arviz,
cachetools,
cloudpickle,
numpy,
pandas,
pytensor,
rich,
scipy,
threadpoolctl,
typing-extensions,
}:
buildPythonPackage rec {
pname = "pymc";
version = "5.16.1";
pyproject = true;
disabled = pythonOlder "3.10";
src = fetchFromGitHub {
owner = "pymc-devs";
repo = "pymc";
rev = "refs/tags/v${version}";
hash = "sha256-C3D07uouV8QZLplIonmViZoCXb4AAEN+uGvNly2hcMc=";
};
postPatch = ''
substituteInPlace setup.py \
--replace-fail ', "pytest-cov"' ""
'';
build-system = [ setuptools ];
dependencies = [
arviz
cachetools
cloudpickle
numpy
pandas
pytensor
rich
scipy
threadpoolctl
typing-extensions
];
# The test suite is computationally intensive and test failures are not
# indicative for package usability hence tests are disabled by default.
doCheck = false;
pythonImportsCheck = [ "pymc" ];
meta = {
description = "Bayesian estimation, particularly using Markov chain Monte Carlo (MCMC)";
homepage = "https://github.com/pymc-devs/pymc";
changelog = "https://github.com/pymc-devs/pymc/releases/tag/v${version}";
license = lib.licenses.asl20;
maintainers = with lib.maintainers; [
nidabdella
ferrine
];
};
}
|
