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{
lib,
buildPythonPackage,
fetchFromGitHub,
cmake,
ninja,
scikit-build,
pytest,
numpy,
}:
buildPythonPackage rec {
pname = "segyio";
version = "1.9.12";
pyproject = false; # Built with cmake
patches = [
# https://github.com/equinor/segyio/pull/570
./add_missing_cstdint.patch
];
postPatch = ''
# Removing unecessary build dependency
substituteInPlace python/setup.py --replace "'pytest-runner'," ""
# Fixing bug making one test fail in the python 3.10 build
substituteInPlace python/segyio/open.py --replace \
"cube_metrics = f.xfd.cube_metrics(iline, xline)" \
"cube_metrics = f.xfd.cube_metrics(int(iline), int(xline))"
'';
src = fetchFromGitHub {
owner = "equinor";
repo = pname;
rev = "refs/tags/v${version}";
hash = "sha256-+N2JvHBxpdbysn4noY/9LZ4npoQ9143iFEzaxoafnms=";
};
nativeBuildInputs = [
cmake
ninja
scikit-build
];
doCheck = true;
# I'm not modifying the checkPhase nor adding a pytestCheckHook because the pytest is called
# within the cmake test phase
nativeCheckInputs = [
pytest
numpy
];
meta = with lib; {
description = "Fast Python library for SEGY files";
homepage = "https://github.com/equinor/segyio";
license = licenses.lgpl3Only;
maintainers = with maintainers; [ atila ];
};
}
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