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{
lib,
stdenv,
asdf,
astropy,
astropy-extension-helpers,
astropy-helpers,
beautifulsoup4,
buildPythonPackage,
drms,
fetchPypi,
glymur,
h5netcdf,
hypothesis,
lxml,
matplotlib,
numpy,
pandas,
parfive,
pytest-astropy,
pytestCheckHook,
pytest-mock,
python-dateutil,
pythonOlder,
scikit-image,
scipy,
setuptools-scm,
sqlalchemy,
tqdm,
zeep,
}:
buildPythonPackage rec {
pname = "sunpy";
version = "5.1.4";
format = "setuptools";
disabled = pythonOlder "3.8";
src = fetchPypi {
inherit pname version;
hash = "sha256-y+tw1I+C6wDFlJvObWrOhisrryQCeXulkwFyRCuAgTA=";
};
nativeBuildInputs = [
astropy-extension-helpers
setuptools-scm
];
propagatedBuildInputs = [
astropy
astropy-helpers
numpy
parfive
];
passthru.optional-dependencies = {
asdf = [
asdf
# asdf-astropy
];
database = [ sqlalchemy ];
image = [
scikit-image
scipy
];
net = [
beautifulsoup4
drms
python-dateutil
tqdm
zeep
];
jpeg2000 = [
glymur
lxml
];
timeseries = [
# cdflib
h5netcdf
# h5py
matplotlib
pandas
];
};
nativeCheckInputs =
[
hypothesis
pytest-astropy
pytest-mock
pytestCheckHook
]
++ passthru.optional-dependencies.asdf
++ passthru.optional-dependencies.database
++ passthru.optional-dependencies.image
++ passthru.optional-dependencies.net
++ passthru.optional-dependencies.timeseries;
postPatch = ''
substituteInPlace setup.cfg \
--replace " --dist no" ""
'';
# darwin has write permission issues
doCheck = stdenv.hostPlatform.isLinux;
preCheck = ''
export HOME=$(mktemp -d)
'';
disabledTests = [
"rst"
"test_sunpy_warnings_logging"
"test_main_nonexisting_module"
"test_main_stdlib_module"
"test_find_dependencies"
];
disabledTestPaths = [
# Tests are very slow
"sunpy/net/tests/test_fido.py"
# asdf.extensions plugin issue
"sunpy/io/special/asdf/resources/schemas/"
"sunpy/io/special/asdf/resources/manifests/sunpy-1.0.0.yaml"
# Requires mpl-animators package
"sunpy/map/tests/test_compositemap.py"
"sunpy/map/tests/test_mapbase.py"
"sunpy/map/tests/test_mapsequence.py"
"sunpy/map/tests/test_plotting.py"
"sunpy/map/tests/test_reproject_to.py"
"sunpy/net/tests/test_helioviewer.py"
"sunpy/timeseries/tests/test_timeseriesbase.py"
"sunpy/visualization/animator/tests/test_basefuncanimator.py"
"sunpy/visualization/animator/tests/test_mapsequenceanimator.py"
"sunpy/visualization/animator/tests/test_wcs.py"
"sunpy/visualization/colormaps/tests/test_cm.py"
# Requires cdflib package
"sunpy/timeseries/tests/test_timeseries_factory.py"
# Requires jplephem
"sunpy/image/tests/test_transform.py"
"sunpy/io/special/asdf/tests/test_coordinate_frames.py"
"sunpy/io/special/asdf/tests/test_genericmap.py"
# distutils is deprecated
"sunpy/io/setup_package.py"
];
pytestFlagsArray = [
"-W"
"ignore::DeprecationWarning"
];
# Wants a configuration file
# pythonImportsCheck = [
# "sunpy"
# ];
meta = with lib; {
description = "Python for Solar Physics";
homepage = "https://sunpy.org";
license = licenses.bsd2;
maintainers = [ ];
broken = true;
};
}
|
