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authorgithub-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>2024-05-01 18:01:22 +0000
committerGitHub <noreply@github.com>2024-05-01 18:01:22 +0000
commit67f8ba4a30028468182899667963ca1ad074224d (patch)
treea98f430f6bde3e78136139d40e784197ede6d45b /pkgs/applications/science
parent2b32fd65a31d54e9858734ad488df2a6434b4e8a (diff)
parent6b39739b77c4ab3f39ee3276677ce94af3e2b39c (diff)
Merge master into staging-next
Diffstat (limited to 'pkgs/applications/science')
-rw-r--r--pkgs/applications/science/biology/igv/default.nix4
-rw-r--r--pkgs/applications/science/math/scotch/default.nix36
2 files changed, 2 insertions, 38 deletions
diff --git a/pkgs/applications/science/biology/igv/default.nix b/pkgs/applications/science/biology/igv/default.nix
index c72cbe4a8b059..219792326b685 100644
--- a/pkgs/applications/science/biology/igv/default.nix
+++ b/pkgs/applications/science/biology/igv/default.nix
@@ -2,10 +2,10 @@
 
 stdenv.mkDerivation rec {
   pname = "igv";
-  version = "2.17.3";
+  version = "2.17.4";
   src = fetchzip {
     url = "https://data.broadinstitute.org/igv/projects/downloads/${lib.versions.majorMinor version}/IGV_${version}.zip";
-    sha256 = "sha256-SGqkWBv4nol0+lnGN7wBHJvndcIqZ5+Wt1wAcXA42cU=";
+    sha256 = "sha256-LF/rwm/XlLHAJjiAlQVTmx5l+5Np2b5rPjoCdN/qERU=";
   };
 
   installPhase = ''
diff --git a/pkgs/applications/science/math/scotch/default.nix b/pkgs/applications/science/math/scotch/default.nix
deleted file mode 100644
index 1eb057cfc7c5c..0000000000000
--- a/pkgs/applications/science/math/scotch/default.nix
+++ /dev/null
@@ -1,36 +0,0 @@
-{ lib, stdenv, fetchurl, bison, mpi, flex, zlib}:
-
-stdenv.mkDerivation rec {
-  version = "6.1.1";
-  pname = "scotch";
-  src_name = "scotch_${version}";
-
-  buildInputs = [ bison mpi flex zlib ];
-
-  src = fetchurl {
-    url = "https://gforge.inria.fr/frs/download.php/file/34618/${src_name}.tar.gz";
-    sha256 = "sha256-OQUvWf9HSkppzvwlzzyvhClACIneugEO5kA8oYj4sxE=";
-  };
-
-  sourceRoot = "${src_name}/src";
-
-  preConfigure = ''
-    ln -s Make.inc/Makefile.inc.x86-64_pc_linux2 Makefile.inc
-  '';
-
-  buildFlags = [ "scotch ptscotch" ];
-  installFlags = [ "prefix=\${out}" ];
-
-  meta = {
-    description = "Graph and mesh/hypergraph partitioning, graph clustering, and sparse matrix ordering";
-    longDescription = ''
-      Scotch is a software package for graph and mesh/hypergraph partitioning, graph clustering,
-      and sparse matrix ordering.
-    '';
-    homepage = "http://www.labri.fr/perso/pelegrin/scotch";
-    license = lib.licenses.cecill-c;
-    maintainers = [ lib.maintainers.bzizou ];
-    platforms = lib.platforms.linux;
-  };
-}
-