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| author | Nick Cao <nickcao@nichi.co> | 2024-02-25 11:12:12 -0500 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2024-02-25 11:12:12 -0500 |
| commit | c063b9b052e26ecf654c1460e083c8e2a50de38b (patch) | |
| tree | 29fccca81129d7f7a6d2af4f703e6549d52ddcdc /pkgs/applications | |
| parent | e42787a15703be0850c42ebfc76aa3a00aec2f27 (diff) | |
| parent | 0c544b0f0fa8c58fbc3bec059a9b8606f974d52a (diff) | |
Merge pull request #291307 from trofi/sortmerna-gcc-13-fix
sortmerna: fix `gcc-13` build
Diffstat (limited to 'pkgs/applications')
| -rw-r--r-- | pkgs/applications/science/biology/sortmerna/default.nix | 4 |
1 files changed, 4 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/sortmerna/default.nix b/pkgs/applications/science/biology/sortmerna/default.nix index a529867aaa743..bfd6d20f1384a 100644 --- a/pkgs/applications/science/biology/sortmerna/default.nix +++ b/pkgs/applications/science/biology/sortmerna/default.nix @@ -32,6 +32,10 @@ stdenv.mkDerivation rec { substituteInPlace src/sortmerna/CMakeLists.txt \ --replace "target_link_libraries(sortmerna" \ "target_link_libraries(sortmerna Threads::Threads" + + # Fix gcc-13 build by adding missing <cstdint> includes: + # https://github.com/sortmerna/sortmerna/issues/412 + sed -e '1i #include <cstdint>' -i include/kseq_load.hpp ''; meta = with lib; { |