diff options
author | Markus Kowalewski <markus.kowalewski@fysik.su.se> | 2019-03-05 17:52:58 +0100 |
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committer | Markus Kowalewski <markus.kowalewski@fysik.su.se> | 2019-03-05 17:52:58 +0100 |
commit | c997f5d0f2c2c5219fa46a3ccbb57ab46e98fce3 (patch) | |
tree | bfba2eff91333a276954a78ba2d51833f8ee34d1 /pkgs/development/compilers/julia | |
parent | 1c6a193b3ed36dd08e35a7b0ea1d28b72133d6c6 (diff) |
julia: remove 0.6.4 (julia_06)
Diffstat (limited to 'pkgs/development/compilers/julia')
-rw-r--r-- | pkgs/development/compilers/julia/0002-use-system-suitesparse.patch | 25 | ||||
-rw-r--r-- | pkgs/development/compilers/julia/default.nix | 201 |
2 files changed, 0 insertions, 226 deletions
diff --git a/pkgs/development/compilers/julia/0002-use-system-suitesparse.patch b/pkgs/development/compilers/julia/0002-use-system-suitesparse.patch deleted file mode 100644 index 17f49ad5ca9f5..0000000000000 --- a/pkgs/development/compilers/julia/0002-use-system-suitesparse.patch +++ /dev/null @@ -1,25 +0,0 @@ -From e2b0ed6664fe4adfd0f9ce8fa14732d47b30ab5c Mon Sep 17 00:00:00 2001 -From: Thomas Tuegel <ttuegel@gmail.com> -Date: Sat, 10 Oct 2015 16:18:53 -0500 -Subject: [PATCH 2/3] use system suitesparse - ---- - base/sparse/cholmod.jl | 2 +- - 1 file changed, 1 insertion(+), 1 deletion(-) - -diff --git a/base/sparse/cholmod.jl b/base/sparse/cholmod.jl -index ec7e980..f834cc1 100644 ---- a/base/sparse/cholmod.jl -+++ b/base/sparse/cholmod.jl -@@ -151,7 +151,7 @@ function __init__() - - # Register gc tracked allocator if CHOLMOD is new enough - if current_version >= v"3.0.0" -- cnfg = cglobal((:SuiteSparse_config, :libsuitesparseconfig), Ptr{Void}) -+ cnfg = cglobal((:SuiteSparse_config, :libsuitesparse), Ptr{Void}) - unsafe_store!(cnfg, cglobal(:jl_malloc, Ptr{Void}), 1) - unsafe_store!(cnfg, cglobal(:jl_calloc, Ptr{Void}), 2) - unsafe_store!(cnfg, cglobal(:jl_realloc, Ptr{Void}), 3) --- -2.5.2 - diff --git a/pkgs/development/compilers/julia/default.nix b/pkgs/development/compilers/julia/default.nix deleted file mode 100644 index 4c0b1359bd8d2..0000000000000 --- a/pkgs/development/compilers/julia/default.nix +++ /dev/null @@ -1,201 +0,0 @@ -{ stdenv, fetchurl, fetchzip -# build tools -, gfortran, m4, makeWrapper, patchelf, perl, which, python2 -# libjulia dependencies -, libunwind, readline, utf8proc, zlib -, llvm -# standard library dependencies -, curl, fftwSinglePrec, fftw, gmp, libgit2, mpfr, openlibm, openspecfun, pcre2 -# linear algebra -, openblas, arpack, suitesparse -# Darwin frameworks -, CoreServices, ApplicationServices -}: - -with stdenv.lib; - -# All dependencies must use the same OpenBLAS. -let - arpack_ = arpack; - suitesparse_ = suitesparse; -in -let - arpack = arpack_.override { inherit openblas; }; - suitesparse = suitesparse_.override { inherit openblas; }; -in - -let - dsfmtVersion = "2.2.3"; - dsfmt = fetchurl { - url = "http://www.math.sci.hiroshima-u.ac.jp/~m-mat/MT/SFMT/dSFMT-src-${dsfmtVersion}.tar.gz"; - sha256 = "03kaqbjbi6viz0n33dk5jlf6ayxqlsq4804n7kwkndiga9s4hd42"; - }; - - libuvVersion = "d8ab1c6a33e77bf155facb54215dd8798e13825d"; - libuv = fetchurl { - url = "https://api.github.com/repos/JuliaLang/libuv/tarball/${libuvVersion}"; - sha256 = "0q5ahc9dzca2yc6cjbhpfi9nwc4yhhjbgxgsychksn13d24gv7ba"; - }; - - rmathVersion = "0.1"; - rmath-julia = fetchurl { - url = "https://api.github.com/repos/JuliaLang/Rmath-julia/tarball/v${rmathVersion}"; - sha256 = "1qyps217175qhid46l8f5i1v8i82slgp23ia63x2hzxwfmx8617p"; - }; - - virtualenvVersion = "15.0.0"; - virtualenv = fetchurl { - url = "mirror://pypi/v/virtualenv/virtualenv-${virtualenvVersion}.tar.gz"; - sha256 = "06fw4liazpx5vf3am45q2pdiwrv0id7ckv7n6zmpml29x6vkzmkh"; - }; - - majorVersion = "0"; - minorVersion = "6"; - maintenanceVersion = "4"; - version = "${majorVersion}.${minorVersion}.${maintenanceVersion}"; -in - -stdenv.mkDerivation rec { - pname = "julia"; - inherit version; - name = "${pname}-${version}"; - - src = fetchzip { - url = "https://github.com/JuliaLang/${pname}/releases/download/v${version}/${name}.tar.gz"; - sha256 = "09axkkj914al7lzvcvhb33hz5wp083lk18llsvrn622fqhmyqabl"; - }; - prePatch = '' - mkdir deps/srccache - cp "${dsfmt}" "./deps/srccache/dsfmt-${dsfmtVersion}.tar.gz" - cp "${rmath-julia}" "./deps/srccache/Rmath-julia-${rmathVersion}.tar.gz" - cp "${libuv}" "./deps/srccache/libuv-${libuvVersion}.tar.gz" - cp "${virtualenv}" "./deps/srccache/virtualenv-${virtualenvVersion}.tar.gz" - ''; - - patches = [ - ./0001.1-use-system-utf8proc.patch - ./0002-use-system-suitesparse.patch - ]; - - postPatch = '' - patchShebangs . contrib - for i in backtrace replutil cmdlineargs compile; do - mv test/$i.jl{,.off} - touch test/$i.jl - done - - sed -e 's/Invalid Content-Type:/invalid Content-Type:/g' -i test/libgit2.jl - sed -e 's/Failed to resolve /failed to resolve /g' -i test/libgit2.jl - ''; - - buildInputs = [ - arpack fftw fftwSinglePrec gmp libgit2 libunwind mpfr - pcre2.dev openblas openlibm openspecfun readline suitesparse utf8proc - zlib llvm - ] - ++ stdenv.lib.optionals stdenv.isDarwin [CoreServices ApplicationServices] - ; - - nativeBuildInputs = [ curl gfortran m4 makeWrapper patchelf perl python2 which ]; - - makeFlags = - let - arch = head (splitString "-" stdenv.hostPlatform.system); - march = { "x86_64" = "x86-64"; "i686" = "pentium4"; }."${arch}" - or (throw "unsupported architecture: ${arch}"); - # Julia requires Pentium 4 (SSE2) or better - cpuTarget = { "x86_64" = "x86-64"; "i686" = "pentium4"; }."${arch}" - or (throw "unsupported architecture: ${arch}"); - in [ - "ARCH=${arch}" - "MARCH=${march}" - "JULIA_CPU_TARGET=${cpuTarget}" - "PREFIX=$(out)" - "prefix=$(out)" - "SHELL=${stdenv.shell}" - - "USE_SYSTEM_BLAS=1" - "USE_BLAS64=${if openblas.blas64 then "1" else "0"}" - "LIBBLAS=-lopenblas" - "LIBBLASNAME=libopenblas" - - "USE_SYSTEM_LAPACK=1" - "LIBLAPACK=-lopenblas" - "LIBLAPACKNAME=libopenblas" - - "USE_SYSTEM_SUITESPARSE=1" - "SUITESPARSE_LIB=-lsuitesparse" - "SUITESPARSE_INC=-I${suitesparse}/include" - - "USE_SYSTEM_ARPACK=1" - "USE_SYSTEM_FFTW=1" - "USE_SYSTEM_GMP=1" - "USE_SYSTEM_LIBGIT2=1" - "USE_SYSTEM_LIBUNWIND=1" - - "USE_SYSTEM_LLVM=1" - "LLVM_VER=3.9.1" - - "USE_SYSTEM_MPFR=1" - "USE_SYSTEM_OPENLIBM=1" - "USE_SYSTEM_OPENSPECFUN=1" - "USE_SYSTEM_PATCHELF=1" - "USE_SYSTEM_PCRE=1" - "PCRE_CONFIG=${pcre2.dev}/bin/pcre2-config" - "PCRE_INCL_PATH=${pcre2.dev}/include/pcre2.h" - "USE_SYSTEM_READLINE=1" - "USE_SYSTEM_UTF8PROC=1" - "USE_SYSTEM_ZLIB=1" - ]; - - NIX_CFLAGS_COMPILE = [ "-fPIC" ]; - - LD_LIBRARY_PATH = makeLibraryPath [ - arpack fftw fftwSinglePrec gmp libgit2 mpfr openblas openlibm - openspecfun pcre2 suitesparse llvm - ]; - - dontStrip = true; - dontPatchELF = true; - - enableParallelBuilding = true; - - doCheck = !stdenv.isDarwin; - checkTarget = "testall"; - # Julia's tests require read/write access to $HOME - preCheck = '' - export HOME="$NIX_BUILD_TOP" - ''; - - preBuild = '' - sed -e '/^install:/s@[^ ]*/doc/[^ ]*@@' -i Makefile - sed -e '/[$](DESTDIR)[$](docdir)/d' -i Makefile - export LD_LIBRARY_PATH=${LD_LIBRARY_PATH} - ''; - - postInstall = '' - # Symlink shared libraries from LD_LIBRARY_PATH into lib/julia, - # as using a wrapper with LD_LIBRARY_PATH causes segmentation - # faults when program returns an error: - # $ julia -e 'throw(Error())' - find $(echo $LD_LIBRARY_PATH | sed 's|:| |g') -maxdepth 1 -name '*.${if stdenv.isDarwin then "dylib" else "so"}*' | while read lib; do - if [[ ! -e $out/lib/julia/$(basename $lib) ]]; then - ln -sv $lib $out/lib/julia/$(basename $lib) - fi - done - ''; - - passthru = { - inherit majorVersion minorVersion maintenanceVersion; - site = "share/julia/site/v${majorVersion}.${minorVersion}"; - }; - - meta = { - description = "High-level performance-oriented dynamical language for technical computing"; - homepage = https://julialang.org/; - license = stdenv.lib.licenses.mit; - maintainers = with stdenv.lib.maintainers; [ raskin ]; - platforms = [ "i686-linux" "x86_64-linux" "x86_64-darwin" ]; - broken = stdenv.isi686; - }; -} |