diff options
| author | Robert T. McGibbon <rmcgibbo@gmail.com> | 2021-03-23 18:30:55 -0400 |
|---|---|---|
| committer | Robert T. McGibbon <rmcgibbo@gmail.com> | 2021-03-24 11:50:13 -0400 |
| commit | 877c07041509f4b4ff9ec480e85188cb1766371c (patch) | |
| tree | fce6ebafbe54506151b97eb6f22ee5dcb8b5e2fa /pkgs/development/python-modules/hdbscan | |
| parent | 7865db274bffa497feef0c07aa7d7ace86734561 (diff) | |
python3Packages.hdbscan: unbreak
Diffstat (limited to 'pkgs/development/python-modules/hdbscan')
| -rw-r--r-- | pkgs/development/python-modules/hdbscan/default.nix | 18 |
1 files changed, 15 insertions, 3 deletions
diff --git a/pkgs/development/python-modules/hdbscan/default.nix b/pkgs/development/python-modules/hdbscan/default.nix index 6e381794cff58..d2590d14955cd 100644 --- a/pkgs/development/python-modules/hdbscan/default.nix +++ b/pkgs/development/python-modules/hdbscan/default.nix @@ -1,8 +1,9 @@ { lib , buildPythonPackage +, fetchpatch , cython , numpy -, nose +, pytestCheckHook , scipy , scikitlearn , fetchPypi @@ -18,11 +19,22 @@ buildPythonPackage rec { inherit pname version; sha256 = "e3a418d0d36874f7b6a1bf0b7461f3857fc13a525fd48ba34caed2fe8973aa26"; }; - - checkInputs = [ nose ]; + patches = [ + # This patch fixes compatibility with numpy 1.20. It will be in the next release + # after 0.8.27 + (fetchpatch { + url = "https://github.com/scikit-learn-contrib/hdbscan/commit/5b67a4fba39c5aebe8187a6a418da677f89a63e0.patch"; + sha256 = "07d7jdwk0b8kgaqkifd529sarji01j1jiih7cfccc5kxmlb5py9h"; + }) + ]; nativeBuildInputs = [ cython ]; propagatedBuildInputs = [ numpy scipy scikitlearn joblib six ]; + preCheck = '' + cd hdbscan/tests + rm __init__.py + ''; + checkInputs = [ pytestCheckHook ]; meta = with lib; { description = "Hierarchical Density-Based Spatial Clustering of Applications with Noise, a clustering algorithm with a scikit-learn compatible API"; |