Merge master into staging-next

10 files changed, 67 insertions, 15 deletions

diff --git a/pkgs/development/libraries/amdvlk/default.nix b/pkgs/development/libraries/amdvlk/default.nix
index 2ef3f3d3920b1..3978f380a3b6b 100644
--- a/pkgs/development/libraries/amdvlk/default.nix
+++ b/pkgs/development/libraries/amdvlk/default.nix
@@ -21,13 +21,13 @@ let
 
 in stdenv.mkDerivation rec {
   pname = "amdvlk";
-  version = "2021.Q2.5";
+  version = "2021.Q3.1";
 
   src = fetchRepoProject {
     name = "${pname}-src";
     manifest = "https://github.com/GPUOpen-Drivers/AMDVLK.git";
     rev = "refs/tags/v-${version}";
-    sha256 = "0NJoGk++SHt4dtoUj3UQeW4zFtwa7osczUr+vxi8DG8=";
+    sha256 = "HisJsG27UvVbe0w8zzZArqioQQRxfuK2TPEWggV3TNA=";
   };
 
   buildInputs = [
diff --git a/pkgs/development/libraries/libwebsockets/default.nix b/pkgs/development/libraries/libwebsockets/default.nix
index b6ef6fa49b218..151d4c7ee48f6 100644
--- a/pkgs/development/libraries/libwebsockets/default.nix
+++ b/pkgs/development/libraries/libwebsockets/default.nix
@@ -26,8 +26,12 @@ let
 
     NIX_CFLAGS_COMPILE = lib.optionalString stdenv.cc.isGNU "-Wno-error=unused-but-set-variable";
 
-    postInstall = "rm -rf ${placeholder "out"}/share/libwebsockets-test-server";
-    disallowedReferences = [ stdenv.cc.cc ];  # $out/share/libwebsockets-test-server/plugins/libprotocol_*.so refers to crtbeginS.o
+    postInstall = ''
+      rm -r ${placeholder "out"}/share/libwebsockets-test-server
+    '';
+
+    # $out/share/libwebsockets-test-server/plugins/libprotocol_*.so refers to crtbeginS.o
+    disallowedReferences = [ stdenv.cc.cc ];
 
     meta = with lib; {
       description = "Light, portable C library for websockets";
diff --git a/pkgs/development/libraries/ode/default.nix b/pkgs/development/libraries/ode/default.nix
index d9c82f79bb35c..211821e084ccc 100644
--- a/pkgs/development/libraries/ode/default.nix
+++ b/pkgs/development/libraries/ode/default.nix
@@ -2,16 +2,16 @@
 
 stdenv.mkDerivation rec {
   pname = "ode";
-  version = "0.12";
+  version = "0.16.2";
 
   src = fetchurl {
-    url = "mirror://sourceforge/opende/ode-${version}.tar.bz2";
-    sha256 = "0l63ymlkgfp5cb0ggqwm386lxmc3al21nb7a07dd49f789d33ib5";
+    url = "https://bitbucket.org/odedevs/${pname}/downloads/${pname}-${version}.tar.gz";
+    sha256 = "08hgh4gqdk77jcw8b7gq2mwsfg4a5v5y0j7g42bxiqhmn3ffnsmj";
   };
 
   meta = with lib; {
     description = "Open Dynamics Engine";
-    homepage = "https://sourceforge.net/projects/opende";
+    homepage = "https://www.ode.org";
     platforms = platforms.linux;
     license = with licenses; [ bsd3 lgpl21 lgpl3 zlib ];
   };
diff --git a/pkgs/development/libraries/physics/yoda/default.nix b/pkgs/development/libraries/physics/yoda/default.nix
index c5a83f782f468..9398c4d2f36ea 100644
--- a/pkgs/development/libraries/physics/yoda/default.nix
+++ b/pkgs/development/libraries/physics/yoda/default.nix
@@ -25,6 +25,13 @@ stdenv.mkDerivation rec {
       sha256 = "sha256-MZTOIt468bdPCS7UVfr5hQZUsVy3TpY/TjRrNySIL70=";
       excludes = [ "ChangeLog" ];
     })
+    # fix a minor bug
+    # https://gitlab.com/hepcedar/yoda/-/merge_requests/45
+    (fetchpatch {
+      name = "yoda-fix-yodascale-for-gz.patch";
+      url = "https://gitlab.com/hepcedar/yoda/-/commit/b03162aeaa2c99e38512ba6e4818d2e0a825b757.diff";
+      sha256 = "sha256-IMuPalQ/GKcdJOKAlwE/IRWtxDdu0inoj+A9nbRl6Gs=";
+    })
   ];
 
   nativeBuildInputs = with python.pkgs; [ cython makeWrapper ];
diff --git a/pkgs/development/node-packages/default.nix b/pkgs/development/node-packages/default.nix
index 498f41bc1b3fd..1a1a8a9eb0b83 100644
--- a/pkgs/development/node-packages/default.nix
+++ b/pkgs/development/node-packages/default.nix
@@ -218,12 +218,12 @@ let
           # remove node_ name prefix
           (fetchpatch {
             url = "https://github.com/svanderburg/node2nix/commit/b54d45207427ff46e90f16f2f32771fdc8bff5a4.patch";
-            sha256 = "03cg2xwryvdlvg299dg91qxicrw2r43grja80an9zkb875ps8jxh";
+            sha256 = "sha256-ubUdF0q3l4xxqZ7f9EiQEUQzyqxi9Q6zsRPETHlfzh8=";
           })
           # set meta platform
           (fetchpatch {
             url = "https://github.com/svanderburg/node2nix/commit/58736093161f2d237c17e75a96529b018cd0ac64.patch";
-            sha256 = "1c91qfqa6p4hzyafv5pq6rpgnny2805n007b1443gbqwrz5awz6n";
+            sha256 = "0sif7803c9g6gjmmdniw5qxrq5igiz9nqdmdrcf1hxfi5x43a32h";
           })
         ];
       };
diff --git a/pkgs/development/python-modules/agate-sql/default.nix b/pkgs/development/python-modules/agate-sql/default.nix
index 890f44b4ad38e..68f166b3c7c51 100644
--- a/pkgs/development/python-modules/agate-sql/default.nix
+++ b/pkgs/development/python-modules/agate-sql/default.nix
@@ -22,6 +22,10 @@ buildPythonPackage rec {
 
   propagatedBuildInputs = [ agate sqlalchemy ];
 
+  # crate is broken in nixpkgs, with SQLAlchemy > 1.3
+  # Skip tests for now as they rely on it.
+  doCheck = false;
+
   checkInputs = [ crate nose geojson ];
 
   checkPhase = ''
diff --git a/pkgs/development/python-modules/crate/default.nix b/pkgs/development/python-modules/crate/default.nix
index 07b9652e7753f..c4a698c5250a0 100644
--- a/pkgs/development/python-modules/crate/default.nix
+++ b/pkgs/development/python-modules/crate/default.nix
@@ -39,5 +39,11 @@ buildPythonPackage rec {
     description = "A Python client library for CrateDB";
     license = licenses.asl20;
     maintainers = with maintainers; [ doronbehar ];
+    # 2021-07-12 (@layus): Please unbreak when an update fixes compatibility
+    # with the version of SQLAlchemy in nixpkgs
+    # And also re-enable tests in pythonPackages.agate-sql.
+    # The version string below is intentionally split, so nixpkgs-update does
+    # not change it. That would make this warning pretty useless.
+    broken = assert version == "0.2"+"6.0"; true;
   };
 }
diff --git a/pkgs/development/tools/earthly/default.nix b/pkgs/development/tools/earthly/default.nix
index b46a97df20a37..e806b502de861 100644
--- a/pkgs/development/tools/earthly/default.nix
+++ b/pkgs/development/tools/earthly/default.nix
@@ -2,16 +2,16 @@
 
 buildGoModule rec {
   pname = "earthly";
-  version = "0.5.17";
+  version = "0.5.18";
 
   src = fetchFromGitHub {
     owner = "earthly";
     repo = "earthly";
     rev = "v${version}";
-    sha256 = "sha256-SuHHeO2KFjB3HbLv1ODBGaXzNaDi/FNPOGg/lX8JLJE=";
+    sha256 = "sha256-YY4scGRMuvyEpeEgvoJJsTtROl11hMyGr7vYBYvJY/w=";
   };
 
-  vendorSha256 = "sha256-D62fG+T3G1W7xteSGlTtEkXbQfGAmBTYJeATH2CVtwY=";
+  vendorSha256 = "sha256-aDkaOycQ/wPybSH5fnJIGtCOh+KV0wEF+qinRQQIdm4=";
 
   buildFlagsArray = ''
     -ldflags=
diff --git a/pkgs/development/tools/ko/default.nix b/pkgs/development/tools/ko/default.nix
new file mode 100644
index 0000000000000..4754a32db8254
--- /dev/null
+++ b/pkgs/development/tools/ko/default.nix
@@ -0,0 +1,31 @@
+{ lib
+, buildGoModule
+, fetchFromGitHub
+, git
+}:
+
+buildGoModule rec {
+  pname = "ko";
+  version = "0.8.3";
+
+  src = fetchFromGitHub {
+    owner = "google";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "sha256-LoOXZY4uF7GSS3Dh/ozCsLJTxgmPmZZuEisJ4ShjCBc=";
+  };
+
+  vendorSha256 = null;
+  excludedPackages = "test";
+  checkInputs = [ git ];
+  preCheck = ''
+    git init
+  '';
+
+  meta = with lib; {
+    description = "A simple, fast container image builder for Go applications.";
+    homepage = "https://github.com/google/ko";
+    license = licenses.asl20;
+    maintainers = with maintainers; [ nickcao ];
+  };
+}
diff --git a/pkgs/development/web/cypress/default.nix b/pkgs/development/web/cypress/default.nix
index 811a63b0cef84..ff673658272e5 100644
--- a/pkgs/development/web/cypress/default.nix
+++ b/pkgs/development/web/cypress/default.nix
@@ -17,11 +17,11 @@
 
 stdenv.mkDerivation rec {
   pname = "cypress";
-  version = "7.7.0";
+  version = "8.0.0";
 
   src = fetchzip {
     url = "https://cdn.cypress.io/desktop/${version}/linux-x64/cypress.zip";
-    sha256 = "1mr46raha5aqi8ba0cqvyil5z4vcr46hnxqqmpk3fkrr8awd2897";
+    sha256 = "144mz37xhk7gkwhmf67q1h07f2biy5nnw78yb2syc7w28v48ng0z";
   };
 
   # don't remove runtime deps