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authorSandro Jäckel <sandro.jaeckel@gmail.com>2021-03-08 01:31:00 +0100
committerSandro Jäckel <sandro.jaeckel@gmail.com>2021-03-12 00:12:56 +0100
commit8a26c93b4c11915b3169d966d35aa816e3a11d94 (patch)
tree26043e96a361134d76d0acc6900758c7543e10a7 /pkgs
parent6f3eea320cce950fe21d9236ec90fdd2cd11e51b (diff)
pythonPackages: move overrides into new lines
Diffstat (limited to 'pkgs')
-rw-r--r--pkgs/development/python-modules/objgraph/default.nix4
-rw-r--r--pkgs/top-level/python-packages.nix503
2 files changed, 346 insertions, 161 deletions
diff --git a/pkgs/development/python-modules/objgraph/default.nix b/pkgs/development/python-modules/objgraph/default.nix
index c79b11252be0f..0d2da52f015cb 100644
--- a/pkgs/development/python-modules/objgraph/default.nix
+++ b/pkgs/development/python-modules/objgraph/default.nix
@@ -3,7 +3,7 @@
 , fetchPypi
 , isPyPy
 , substituteAll
-, graphvizPkg
+, graphvizPkgs
 , graphviz
 , mock
 }:
@@ -23,7 +23,7 @@ buildPythonPackage rec {
   patches = [
     (substituteAll {
       src = ./hardcode-graphviz-path.patch;
-      graphviz = graphvizPkg;
+      graphviz = graphvizPkgs;
     })
   ];
 
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 7799b6356b39c..dc5902dcb27b6 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -386,15 +386,21 @@ in {
 
   ansiwrap = callPackage ../development/python-modules/ansiwrap { };
 
-  antlr4-python2-runtime = callPackage ../development/python-modules/antlr4-python2-runtime { antlr4 = pkgs.antlr4; };
+  antlr4-python2-runtime = callPackage ../development/python-modules/antlr4-python2-runtime {
+    inherit (pkgs) antlr4;
+  };
 
-  antlr4-python3-runtime = callPackage ../development/python-modules/antlr4-python3-runtime { antlr4 = pkgs.antlr4; };
+  antlr4-python3-runtime = callPackage ../development/python-modules/antlr4-python3-runtime {
+    inherit (pkgs) antlr4;
+  };
 
   anyio = callPackage ../development/python-modules/anyio { };
 
   anyjson = callPackage ../development/python-modules/anyjson { };
 
-  anytree = callPackage ../development/python-modules/anytree { inherit (pkgs) graphviz; };
+  anytree = callPackage ../development/python-modules/anytree {
+    inherit (pkgs) graphviz;
+  };
 
   apache-airflow = callPackage ../development/python-modules/apache-airflow { };
 
@@ -432,9 +438,13 @@ in {
 
   area = callPackage ../development/python-modules/area { };
 
-  arelle = callPackage ../development/python-modules/arelle { gui = true; };
+  arelle = callPackage ../development/python-modules/arelle {
+    gui = true;
+  };
 
-  arelle-headless = callPackage ../development/python-modules/arelle { gui = false; };
+  arelle-headless = callPackage ../development/python-modules/arelle {
+    gui = false;
+  };
 
   aresponses = callPackage ../development/python-modules/aresponses { };
 
@@ -446,7 +456,7 @@ in {
 
   args = callPackage ../development/python-modules/args { };
 
-  aria2p = callPackage ../development/python-modules/aria2p { inherit (pkgs) aria2; };
+  aria2p = callPackage ../development/python-modules/aria2p { };
 
   arrayqueues = callPackage ../development/python-modules/arrayqueues { };
 
@@ -558,7 +568,9 @@ in {
 
   audiotools = callPackage ../development/python-modules/audiotools { };
 
-  augeas = callPackage ../development/python-modules/augeas { inherit (pkgs) augeas; };
+  augeas = callPackage ../development/python-modules/augeas {
+    inherit (pkgs) augeas;
+  };
 
   auroranoaa = callPackage ../development/python-modules/auroranoaa { };
 
@@ -730,8 +742,7 @@ in {
 
   azure-mgmt-iothub = callPackage ../development/python-modules/azure-mgmt-iothub { };
 
-  azure-mgmt-iothubprovisioningservices =
-    callPackage ../development/python-modules/azure-mgmt-iothubprovisioningservices { };
+  azure-mgmt-iothubprovisioningservices = callPackage ../development/python-modules/azure-mgmt-iothubprovisioningservices { };
 
   azure-mgmt-keyvault = callPackage ../development/python-modules/azure-mgmt-keyvault { };
 
@@ -873,8 +884,7 @@ in {
 
   backports-shutil-which = callPackage ../development/python-modules/backports-shutil-which { };
 
-  backports_ssl_match_hostname =
-    if !(pythonOlder "3.5") then null else callPackage ../development/python-modules/backports_ssl_match_hostname { };
+  backports_ssl_match_hostname = callPackage ../development/python-modules/backports_ssl_match_hostname { };
 
   backports_tempfile = callPackage ../development/python-modules/backports_tempfile { };
 
@@ -886,7 +896,9 @@ in {
 
   bandit = callPackage ../development/python-modules/bandit { };
 
-  bap = callPackage ../development/python-modules/bap { inherit (pkgs.ocaml-ng.ocamlPackages) bap; };
+  bap = callPackage ../development/python-modules/bap {
+    inherit (pkgs.ocaml-ng.ocamlPackages) bap;
+  };
 
   baron = callPackage ../development/python-modules/baron { };
 
@@ -898,11 +910,11 @@ in {
 
   basemap = callPackage ../development/python-modules/basemap { };
 
-  bash_kernel = callPackage ../development/python-modules/bash_kernel { inherit (pkgs) bash; };
+  bash_kernel = callPackage ../development/python-modules/bash_kernel { };
 
   bashlex = callPackage ../development/python-modules/bashlex { };
 
-  basiciw = callPackage ../development/python-modules/basiciw { inherit (pkgs) gcc wirelesstools; };
+  basiciw = callPackage ../development/python-modules/basiciw { };
 
   batchgenerators = callPackage ../development/python-modules/batchgenerators { };
 
@@ -1118,8 +1130,7 @@ in {
 
   buildbot-ui = self.buildbot.withPlugins (with self.buildbot-plugins; [ www ]);
 
-  buildbot-full = self.buildbot.withPlugins
-    (with self.buildbot-plugins; [ www console-view waterfall-view grid-view wsgi-dashboards ]);
+  buildbot-full = self.buildbot.withPlugins (with self.buildbot-plugins; [ www console-view waterfall-view grid-view wsgi-dashboards ]);
 
   buildbot-pkg = callPackage ../development/python-modules/buildbot/pkg.nix { };
 
@@ -1133,7 +1144,7 @@ in {
 
   bunch = callPackage ../development/python-modules/bunch { };
 
-  bx-python = callPackage ../development/python-modules/bx-python { inherit (pkgs) zlib; };
+  bx-python = callPackage ../development/python-modules/bx-python { };
 
   bwapy = callPackage ../development/python-modules/bwapy { };
 
@@ -1180,7 +1191,9 @@ in {
 
   canopen = callPackage ../development/python-modules/canopen { };
 
-  capstone = callPackage ../development/python-modules/capstone { inherit (pkgs) capstone; };
+  capstone = callPackage ../development/python-modules/capstone {
+    inherit (pkgs) capstone;
+  };
 
   capturer = callPackage ../development/python-modules/capturer { };
 
@@ -1260,7 +1273,9 @@ in {
 
   chai = callPackage ../development/python-modules/chai { };
 
-  chainer = callPackage ../development/python-modules/chainer { cudaSupport = pkgs.config.cudaSupport or false; };
+  chainer = callPackage ../development/python-modules/chainer {
+    cudaSupport = pkgs.config.cudaSupport or false;
+  };
 
   chainmap = callPackage ../development/python-modules/chainmap { };
 
@@ -1618,9 +1633,7 @@ in {
 
   dask-gateway = callPackage ../development/python-modules/dask-gateway { };
 
-  dask-gateway-server = callPackage ../development/python-modules/dask-gateway-server {
-    inherit (pkgs) go;
-  };
+  dask-gateway-server = callPackage ../development/python-modules/dask-gateway-server { };
 
   dask-glm = callPackage ../development/python-modules/dask-glm { };
 
@@ -1638,9 +1651,7 @@ in {
 
   databricks-cli = callPackage ../development/python-modules/databricks-cli { };
 
-  databricks-connect = callPackage ../development/python-modules/databricks-connect {
-    inherit (pkgs) jdk;
-  };
+  databricks-connect = callPackage ../development/python-modules/databricks-connect { };
 
   dataclasses = callPackage ../development/python-modules/dataclasses { };
 
@@ -1662,9 +1673,7 @@ in {
 
   datashape = callPackage ../development/python-modules/datashape { };
 
-  datatable = callPackage ../development/python-modules/datatable {
-    inherit (pkgs.llvmPackages) libcxx;
-  };
+  datatable = callPackage ../development/python-modules/datatable { };
 
   dateparser = callPackage ../development/python-modules/dateparser { };
 
@@ -2016,9 +2025,7 @@ in {
 
   ds-store = callPackage ../development/python-modules/ds-store { };
 
-  ds4drv = callPackage ../development/python-modules/ds4drv {
-    inherit (pkgs) bluez;
-  };
+  ds4drv = callPackage ../development/python-modules/ds4drv { };
 
   dtopt = callPackage ../development/python-modules/dtopt { };
 
@@ -2047,10 +2054,7 @@ in {
 
   EasyProcess = callPackage ../development/python-modules/easyprocess { };
 
-  easysnmp = callPackage ../development/python-modules/easysnmp {
-    openssl = pkgs.openssl;
-    net-snmp = pkgs.net-snmp;
-  };
+  easysnmp = callPackage ../development/python-modules/easysnmp { };
 
   easy-thumbnails = callPackage ../development/python-modules/easy-thumbnails { };
 
@@ -2085,7 +2089,7 @@ in {
 
   elasticsearch-dsl = callPackage ../development/python-modules/elasticsearch-dsl { };
 
-  elasticsearchdsl = self.elasticsearch-dsl; # alias
+  elasticsearchdsl = self.elasticsearch-dsl;
 
   elementpath = callPackage ../development/python-modules/elementpath { };
 
@@ -2299,9 +2303,7 @@ in {
 
   fints = callPackage ../development/python-modules/fints { };
 
-  fiona = callPackage ../development/python-modules/fiona {
-    gdal_2 = pkgs.gdal_2;
-  };
+  fiona = callPackage ../development/python-modules/fiona { };
 
   fipy = callPackage ../development/python-modules/fipy { };
 
@@ -2808,6 +2810,7 @@ in {
   gorilla = callPackage ../development/python-modules/gorilla { };
 
   gpapi = callPackage ../development/python-modules/gpapi { };
+
   gplaycli = callPackage ../development/python-modules/gplaycli { };
 
   gpgme = toPythonModule (pkgs.gpgme.override {
@@ -2817,7 +2820,9 @@ in {
 
   gphoto2 = callPackage ../development/python-modules/gphoto2 { };
 
-  gprof2dot = callPackage ../development/python-modules/gprof2dot { inherit (pkgs) graphviz; };
+  gprof2dot = callPackage ../development/python-modules/gprof2dot {
+    inherit (pkgs) graphviz;
+  };
 
   gps3 = callPackage ../development/python-modules/gps3 { };
 
@@ -2859,7 +2864,9 @@ in {
 
   graphtage = callPackage ../development/python-modules/graphtage { };
 
-  graphviz = callPackage ../development/python-modules/graphviz { inherit (pkgs) graphviz; };
+  graphviz = callPackage ../development/python-modules/graphviz {
+    inherit (pkgs) graphviz;
+  };
 
   grappelli_safe = callPackage ../development/python-modules/grappelli_safe { };
 
@@ -2924,7 +2931,9 @@ in {
   guppy3 = callPackage ../development/python-modules/guppy3 { };
 
   gurobipy = if stdenv.hostPlatform.system == "x86_64-darwin" then
-    callPackage ../development/python-modules/gurobipy/darwin.nix { inherit (pkgs.darwin) cctools insert_dylib; }
+    callPackage ../development/python-modules/gurobipy/darwin.nix {
+      inherit (pkgs.darwin) cctools insert_dylib;
+    }
   else if stdenv.hostPlatform.system == "x86_64-linux" then
     callPackage ../development/python-modules/gurobipy/linux.nix { }
   else
@@ -2947,13 +2956,17 @@ in {
 
   h2 = callPackage ../development/python-modules/h2 { };
 
-  h3 = callPackage ../development/python-modules/h3 { inherit (pkgs) h3; };
+  h3 = callPackage ../development/python-modules/h3 {
+    inherit (pkgs) h3;
+  };
 
   h5netcdf = callPackage ../development/python-modules/h5netcdf { };
 
-  h5py = callPackage ../development/python-modules/h5py { hdf5 = pkgs.hdf5; };
+  h5py = callPackage ../development/python-modules/h5py { };
 
-  h5py-mpi = self.h5py.override { hdf5 = pkgs.hdf5-mpi; };
+  h5py-mpi = self.h5py.override {
+    hdf5 = pkgs.hdf5-mpi;
+  };
 
   habanero = callPackage ../development/python-modules/habanero { };
 
@@ -2991,7 +3004,9 @@ in {
 
   helper = callPackage ../development/python-modules/helper { };
 
-  hepmc3 = toPythonModule (pkgs.hepmc3.override { inherit python; });
+  hepmc3 = toPythonModule (pkgs.hepmc3.override {
+    inherit python;
+  });
 
   hetzner = callPackage ../development/python-modules/hetzner { };
 
@@ -3007,7 +3022,9 @@ in {
 
   hickle = callPackage ../development/python-modules/hickle { };
 
-  hidapi = callPackage ../development/python-modules/hidapi { inherit (pkgs) udev libusb1; };
+  hidapi = callPackage ../development/python-modules/hidapi {
+    inherit (pkgs) udev libusb1;
+  };
 
   hieroglyph = callPackage ../development/python-modules/hieroglyph { };
 
@@ -3035,7 +3052,9 @@ in {
 
   homeassistant-pyozw = callPackage ../development/python-modules/homeassistant-pyozw { };
 
-  hoomd-blue = toPythonModule (callPackage ../development/python-modules/hoomd-blue { inherit python; });
+  hoomd-blue = toPythonModule (callPackage ../development/python-modules/hoomd-blue {
+    inherit python;
+  });
 
   hopcroftkarp = callPackage ../development/python-modules/hopcroftkarp { };
 
@@ -3127,8 +3146,8 @@ in {
 
   hyperopt = callPackage ../development/python-modules/hyperopt { };
 
-  hypothesis_4 = callPackage ../development/python-modules/hypothesis/2.nix
-    { }; # File name is called 2.nix because this one will need to remain for Python 2.
+  # File name is called 2.nix because this one will need to remain for Python 2.
+  hypothesis_4 = callPackage ../development/python-modules/hypothesis/2.nix { };
 
   hypothesis-auto = callPackage ../development/python-modules/hypothesis-auto { };
 
@@ -3417,13 +3436,17 @@ in {
 
   josepy = callPackage ../development/python-modules/josepy { };
 
-  journalwatch = callPackage ../tools/system/journalwatch { inherit (self) systemd pytest; };
+  journalwatch = callPackage ../tools/system/journalwatch {
+    inherit (self) systemd pytest;
+  };
 
   jpylyzer = callPackage ../development/python-modules/jpylyzer { };
 
   JPype1 = callPackage ../development/python-modules/JPype1 { };
 
-  jq = callPackage ../development/python-modules/jq { inherit (pkgs) jq; };
+  jq = callPackage ../development/python-modules/jq {
+    inherit (pkgs) jq;
+  };
 
   jsbeautifier = callPackage ../development/python-modules/jsbeautifier { };
 
@@ -3507,8 +3530,7 @@ in {
 
   jupyterhub-ldapauthenticator = callPackage ../development/python-modules/jupyterhub-ldapauthenticator { };
 
-  jupyterhub-systemdspawner =
-    callPackage ../development/python-modules/jupyterhub-systemdspawner { inherit (pkgs) bash; };
+  jupyterhub-systemdspawner = callPackage ../development/python-modules/jupyterhub-systemdspawner { };
 
   jupyterhub-tmpauthenticator = callPackage ../development/python-modules/jupyterhub-tmpauthenticator { };
 
@@ -3522,7 +3544,9 @@ in {
 
   jupyterlab_server = callPackage ../development/python-modules/jupyterlab_server { };
 
-  jupyter-repo2docker = callPackage ../development/python-modules/jupyter-repo2docker { pkgs-docker = pkgs.docker; };
+  jupyter-repo2docker = callPackage ../development/python-modules/jupyter-repo2docker {
+    pkgs-docker = pkgs.docker;
+  };
 
   jupyter-sphinx = callPackage ../development/python-modules/jupyter-sphinx { };
 
@@ -3532,7 +3556,9 @@ in {
 
   jwcrypto = callPackage ../development/python-modules/jwcrypto { };
 
-  k5test = callPackage ../development/python-modules/k5test { inherit (pkgs) krb5Full findutils which; };
+  k5test = callPackage ../development/python-modules/k5test {
+    inherit (pkgs) krb5Full findutils which;
+  };
 
   kaa-base = callPackage ../development/python-modules/kaa-base { };
 
@@ -3566,7 +3592,9 @@ in {
 
   keras-preprocessing = callPackage ../development/python-modules/keras-preprocessing { };
 
-  kerberos = callPackage ../development/python-modules/kerberos { inherit (pkgs) kerberos; };
+  kerberos = callPackage ../development/python-modules/kerberos {
+    inherit (pkgs) kerberos;
+  };
 
   keyring = if isPy3k then
     callPackage ../development/python-modules/keyring { }
@@ -3577,9 +3605,13 @@ in {
 
   keystone-engine = callPackage ../development/python-modules/keystone-engine { };
 
-  keyutils = callPackage ../development/python-modules/keyutils { inherit (pkgs) keyutils; };
+  keyutils = callPackage ../development/python-modules/keyutils {
+    inherit (pkgs) keyutils;
+  };
 
-  kicad = disabledIf isPy27 (toPythonModule (pkgs.kicad.override { python3 = python; }).src);
+  kicad = disabledIf isPy27 (toPythonModule (pkgs.kicad.override {
+    python3 = python;
+  }).src);
 
   kinparse = callPackage ../development/python-modules/kinparse { };
 
@@ -3623,7 +3655,7 @@ in {
 
   labgrid = callPackage ../development/python-modules/labgrid { };
 
-  lammps-cython = callPackage ../development/python-modules/lammps-cython { mpi = pkgs.mpi; };
+  lammps-cython = callPackage ../development/python-modules/lammps-cython { };
 
   langcodes = callPackage ../development/python-modules/langcodes { };
 
@@ -3689,11 +3721,17 @@ in {
 
   libais = callPackage ../development/python-modules/libais { };
 
-  libarchive-c = callPackage ../development/python-modules/libarchive-c { inherit (pkgs) libarchive; };
+  libarchive-c = callPackage ../development/python-modules/libarchive-c {
+    inherit (pkgs) libarchive;
+  };
 
-  libarcus = callPackage ../development/python-modules/libarcus { inherit (pkgs) protobuf; };
+  libarcus = callPackage ../development/python-modules/libarcus {
+    inherit (pkgs) protobuf;
+  };
 
-  libasyncns = callPackage ../development/python-modules/libasyncns { inherit (pkgs) libasyncns; };
+  libasyncns = callPackage ../development/python-modules/libasyncns {
+    inherit (pkgs) libasyncns;
+  };
 
   libcloud = if isPy27 then
     callPackage ../development/python-modules/libcloud/2.nix { }
@@ -3741,7 +3779,9 @@ in {
 
   libmr = callPackage ../development/python-modules/libmr { };
 
-  libnacl = callPackage ../development/python-modules/libnacl { inherit (pkgs) libsodium; };
+  libnacl = callPackage ../development/python-modules/libnacl {
+    inherit (pkgs) libsodium;
+  };
 
   libnl-python = disabledIf isPy3k (toPythonModule (pkgs.libnl.override {
     pythonSupport = true;
@@ -3771,7 +3811,9 @@ in {
 
   librouteros = callPackage ../development/python-modules/librouteros { };
 
-  libsass = (callPackage ../development/python-modules/libsass { inherit (pkgs) libsass; });
+  libsass = (callPackage ../development/python-modules/libsass {
+    inherit (pkgs) libsass;
+  });
 
   libsavitar = callPackage ../development/python-modules/libsavitar { };
 
@@ -3861,7 +3903,9 @@ in {
 
   liquidctl = callPackage ../development/python-modules/liquidctl { };
 
-  lirc = disabledIf isPy27 (toPythonModule (pkgs.lirc.override { python3 = python; }));
+  lirc = disabledIf isPy27 (toPythonModule (pkgs.lirc.override {
+    python3 = python;
+  }));
 
   littleutils = callPackage ../development/python-modules/littleutils { };
 
@@ -3933,7 +3977,9 @@ in {
 
   lxc = callPackage ../development/python-modules/lxc { };
 
-  lxml = callPackage ../development/python-modules/lxml { inherit (pkgs) libxml2 libxslt zlib; };
+  lxml = callPackage ../development/python-modules/lxml {
+    inherit (pkgs) libxml2 libxslt zlib;
+  };
 
   lyricwikia = callPackage ../development/python-modules/lyricwikia { };
 
@@ -4001,7 +4047,9 @@ in {
 
   manuel = callPackage ../development/python-modules/manuel { };
 
-  manticore = callPackage ../development/python-modules/manticore { inherit (pkgs) z3; };
+  manticore = callPackage ../development/python-modules/manticore {
+    inherit (pkgs) z3;
+  };
 
   mapbox = callPackage ../development/python-modules/mapbox { };
 
@@ -4011,7 +4059,9 @@ in {
 
   marionette-harness = callPackage ../development/python-modules/marionette-harness { };
 
-  marisa = callPackage ../development/python-modules/marisa { marisa = pkgs.marisa; };
+  marisa = callPackage ../development/python-modules/marisa {
+    inherit (pkgs) marisa;
+  };
 
   marisa-trie = callPackage ../development/python-modules/marisa-trie { };
 
@@ -4101,7 +4151,9 @@ in {
 
   memory_profiler = callPackage ../development/python-modules/memory_profiler { };
 
-  mercurial = disabledIf (!isPy3k) (toPythonModule (pkgs.mercurial.override { python3Packages = self; }));
+  mercurial = disabledIf (!isPy3k) (toPythonModule (pkgs.mercurial.override {
+    python3Packages = self;
+  }));
 
   mergedeep = callPackage ../development/python-modules/mergedeep { };
 
@@ -4144,7 +4196,9 @@ in {
 
   minimock = callPackage ../development/python-modules/minimock { };
 
-  mininet-python = (toPythonModule (pkgs.mininet.override { inherit python; })).py;
+  mininet-python = (toPythonModule (pkgs.mininet.override {
+    inherit python;
+  })).py;
 
   minio = callPackage ../development/python-modules/minio { };
 
@@ -4199,8 +4253,8 @@ in {
 
   mohawk = callPackage ../development/python-modules/mohawk { };
 
-  moinmoin = callPackage ../development/python-modules/moinmoin
-    { }; # Needed here because moinmoin is loaded as a Python library.
+  # Needed here because moinmoin is loaded as a Python library.
+  moinmoin = callPackage ../development/python-modules/moinmoin { };
 
   mongodict = callPackage ../development/python-modules/mongodict { };
 
@@ -4268,13 +4322,15 @@ in {
 
   mpd = callPackage ../development/python-modules/mpd { };
 
-  mpi4py = callPackage ../development/python-modules/mpi4py { mpi = pkgs.mpi; };
+  mpi4py = callPackage ../development/python-modules/mpi4py { };
 
   mplleaflet = callPackage ../development/python-modules/mplleaflet { };
 
   mpmath = callPackage ../development/python-modules/mpmath { };
 
-  mpv = callPackage ../development/python-modules/mpv { mpv = pkgs.mpv; };
+  mpv = callPackage ../development/python-modules/mpv {
+    inherit (pkgs) mpv;
+  };
 
   mpyq = callPackage ../development/python-modules/mpyq { };
 
@@ -4377,7 +4433,9 @@ in {
 
   nanoleaf = callPackage ../development/python-modules/nanoleaf { };
 
-  nanomsg-python = callPackage ../development/python-modules/nanomsg-python { inherit (pkgs) nanomsg; };
+  nanomsg-python = callPackage ../development/python-modules/nanomsg-python {
+    inherit (pkgs) nanomsg;
+  };
 
   nanotime = callPackage ../development/python-modules/nanotime { };
 
@@ -4467,16 +4525,20 @@ in {
 
   nipy = callPackage ../development/python-modules/nipy { };
 
-  nipype = callPackage ../development/python-modules/nipype { inherit (pkgs) which; };
+  nipype = callPackage ../development/python-modules/nipype {
+    inherit (pkgs) which;
+  };
 
   nitime = callPackage ../development/python-modules/nitime { };
 
   nitpick = callPackage ../applications/version-management/nitpick { };
 
-  nix-kernel = callPackage ../development/python-modules/nix-kernel { inherit (pkgs) nix; };
+  nix-kernel = callPackage ../development/python-modules/nix-kernel {
+    inherit (pkgs) nix;
+  };
 
-  nixpart0 = callPackage ../tools/filesystems/nixpart/0.4
-    { }; # This is used for NixOps to make sure we won't break it with the next major version of nixpart.
+  # This is used for NixOps to make sure we won't break it with the next major version of nixpart.
+  nixpart0 = callPackage ../tools/filesystems/nixpart/0.4 { };
 
   nixpart = callPackage ../tools/filesystems/nixpart { };
 
@@ -4549,8 +4611,13 @@ in {
 
   notify-py = callPackage ../development/python-modules/notify-py { };
 
-  notmuch = callPackage ../development/python-modules/notmuch { inherit (pkgs) notmuch; };
-  notmuch2 = callPackage ../development/python-modules/notmuch/2.nix { inherit (pkgs) notmuch; };
+  notmuch = callPackage ../development/python-modules/notmuch {
+    inherit (pkgs) notmuch;
+  };
+
+  notmuch2 = callPackage ../development/python-modules/notmuch/2.nix {
+    inherit (pkgs) notmuch;
+  };
 
   nototools = callPackage ../data/fonts/noto-fonts/tools.nix { };
 
@@ -4570,7 +4637,7 @@ in {
 
   numba = callPackage ../development/python-modules/numba { };
 
-  numcodecs = callPackage ../development/python-modules/numcodecs { inherit (pkgs) gcc8; };
+  numcodecs = callPackage ../development/python-modules/numcodecs { };
 
   numericalunits = callPackage ../development/python-modules/numericalunits { };
 
@@ -4612,7 +4679,10 @@ in {
 
   obfsproxy = callPackage ../development/python-modules/obfsproxy { };
 
-  objgraph = callPackage ../development/python-modules/objgraph { graphvizPkg = pkgs.graphviz; };
+  objgraph = callPackage ../development/python-modules/objgraph {
+    # requires both the graphviz package and python package
+    graphvizPkgs = pkgs.graphviz;
+  };
 
   od = callPackage ../development/python-modules/od { };
 
@@ -4884,7 +4954,9 @@ in {
 
   pefile = callPackage ../development/python-modules/pefile { };
 
-  pelican = callPackage ../development/python-modules/pelican { inherit (pkgs) glibcLocales git; };
+  pelican = callPackage ../development/python-modules/pelican {
+    inherit (pkgs) glibcLocales git;
+  };
 
   pendulum = callPackage ../development/python-modules/pendulum { };
 
@@ -4917,6 +4989,7 @@ in {
   pexpect = callPackage ../development/python-modules/pexpect { };
 
   pg8000 = callPackage ../development/python-modules/pg8000 { };
+
   pg8000_1_12 = callPackage ../development/python-modules/pg8000/1_12.nix { };
 
   pgcli = callPackage ../development/tools/database/pgcli { };
@@ -4993,7 +5066,7 @@ in {
 
   pip-tools = callPackage ../development/python-modules/pip-tools {
     git = pkgs.gitMinimal;
-    glibcLocales = pkgs.glibcLocales;
+    inherit (pkgs) glibcLocales;
   };
 
   pipx = callPackage ../development/python-modules/pipx { };
@@ -5175,6 +5248,7 @@ in {
   prison = callPackage ../development/python-modules/prison { };
 
   privacyidea = callPackage ../development/python-modules/privacyidea { };
+
   privacyidea-ldap-proxy = callPackage ../development/python-modules/privacyidea/ldap-proxy.nix { };
 
   proboscis = callPackage ../development/python-modules/proboscis { };
@@ -5214,9 +5288,9 @@ in {
 
   protobuf = callPackage ../development/python-modules/protobuf {
     disabled = isPyPy;
-    doCheck =
-      !isPy3k; # If a protobuf upgrade causes many Python packages to fail, please pin it here to the previous version.
-    protobuf = pkgs.protobuf;
+    # If a protobuf upgrade causes many Python packages to fail, please pin it here to the previous version.
+    doCheck = !isPy3k;
+    inherit (pkgs) protobuf;
   };
 
   protobuf3-to-dict = callPackage ../development/python-modules/protobuf3-to-dict { };
@@ -5241,7 +5315,7 @@ in {
 
   ptest = callPackage ../development/python-modules/ptest { };
 
-  ptpython = callPackage ../development/python-modules/ptpython { prompt_toolkit = self.prompt_toolkit; };
+  ptpython = callPackage ../development/python-modules/ptpython { };
 
   ptyprocess = callPackage ../development/python-modules/ptyprocess { };
 
@@ -5281,7 +5355,9 @@ in {
 
   Pweave = callPackage ../development/python-modules/pweave { };
 
-  pwntools = callPackage ../development/python-modules/pwntools { debugger = pkgs.gdb; };
+  pwntools = callPackage ../development/python-modules/pwntools {
+    debugger = pkgs.gdb;
+  };
 
   pxml = callPackage ../development/python-modules/pxml { };
 
@@ -5492,7 +5568,9 @@ in {
 
   pydocumentdb = callPackage ../development/python-modules/pydocumentdb { };
 
-  pydot = callPackage ../development/python-modules/pydot { inherit (pkgs) graphviz; };
+  pydot = callPackage ../development/python-modules/pydot {
+    inherit (pkgs) graphviz;
+  };
 
   pydrive = callPackage ../development/python-modules/pydrive { };
 
@@ -5514,7 +5592,9 @@ in {
 
   pyemd = callPackage ../development/python-modules/pyemd { };
 
-  pyenchant = callPackage ../development/python-modules/pyenchant { enchant2 = pkgs.enchant2; };
+  pyenchant = callPackage ../development/python-modules/pyenchant {
+    inherit (pkgs) enchant2;
+  };
 
   pyepsg = callPackage ../development/python-modules/pyepsg { };
 
@@ -5616,9 +5696,13 @@ in {
   pygobject2 = callPackage ../development/python-modules/pygobject { };
 
   pygobject3 = if isPy3k then
-    callPackage ../development/python-modules/pygobject/3.nix { inherit (pkgs) meson; }
+    callPackage ../development/python-modules/pygobject/3.nix {
+      inherit (pkgs) meson;
+    }
   else
-    callPackage ../development/python-modules/pygobject/3.36.nix { inherit (pkgs) meson; };
+    callPackage ../development/python-modules/pygobject/3.36.nix {
+      inherit (pkgs) meson;
+    };
 
   pygogo = callPackage ../development/python-modules/pygogo { };
 
@@ -5626,7 +5710,7 @@ in {
 
   pygraphviz = callPackage ../development/python-modules/pygraphviz {
     inherit (pkgs) graphviz;
-  }; # not the python package
+  };
 
   pygreat = callPackage ../development/python-modules/pygreat { };
 
@@ -5687,7 +5771,9 @@ in {
 
   pykdl = callPackage ../development/python-modules/pykdl { };
 
-  pykdtree = callPackage ../development/python-modules/pykdtree { inherit (pkgs.llvmPackages) openmp; };
+  pykdtree = callPackage ../development/python-modules/pykdtree {
+    inherit (pkgs.llvmPackages) openmp;
+  };
 
   pykeepass = callPackage ../development/python-modules/pykeepass { };
 
@@ -5722,7 +5808,9 @@ in {
 
   pylibconfig2 = callPackage ../development/python-modules/pylibconfig2 { };
 
-  pylibftdi = callPackage ../development/python-modules/pylibftdi { inherit (pkgs) libusb1; };
+  pylibftdi = callPackage ../development/python-modules/pylibftdi {
+    inherit (pkgs) libusb1;
+  };
 
   pylibgen = throw "pylibgen is unmaintained upstreamed, and removed from nixpkgs"; # added 2020-06-20
 
@@ -5967,20 +6055,28 @@ in {
 
   pyqt4 = callPackage ../development/python-modules/pyqt/4.x.nix { };
 
-  pyqt5 = pkgs.libsForQt5.callPackage ../development/python-modules/pyqt/5.x.nix { pythonPackages = self; };
+  pyqt5 = pkgs.libsForQt5.callPackage ../development/python-modules/pyqt/5.x.nix {
+    pythonPackages = self;
+  };
 
-  pyqt5_with_qtmultimedia = self.pyqt5.override { withMultimedia = true; };
+  pyqt5_with_qtmultimedia = self.pyqt5.override {
+    withMultimedia = true;
+  };
 
   /*
     `pyqt5_with_qtwebkit` should not be used by python libraries in
     pkgs/development/python-modules/*. Putting this attribute in
     `propagatedBuildInputs` may cause collisions.
   */
-  pyqt5_with_qtwebkit = self.pyqt5.override { withWebKit = true; };
+  pyqt5_with_qtwebkit = self.pyqt5.override {
+    withWebKit = true;
+  };
 
   pyqtgraph = callPackage ../development/python-modules/pyqtgraph { };
 
-  pyqtwebengine = pkgs.libsForQt5.callPackage ../development/python-modules/pyqtwebengine { pythonPackages = self; };
+  pyqtwebengine = pkgs.libsForQt5.callPackage ../development/python-modules/pyqtwebengine {
+    pythonPackages = self;
+  };
 
   pyquery = callPackage ../development/python-modules/pyquery { };
 
@@ -6059,11 +6155,15 @@ in {
 
   pysam = callPackage ../development/python-modules/pysam { };
 
-  pysaml2 = callPackage ../development/python-modules/pysaml2 { inherit (pkgs) xmlsec; };
+  pysaml2 = callPackage ../development/python-modules/pysaml2 {
+    inherit (pkgs) xmlsec;
+  };
 
   pysc2 = callPackage ../development/python-modules/pysc2 { };
 
-  pyscard = callPackage ../development/python-modules/pyscard { inherit (pkgs.darwin.apple_sdk.frameworks) PCSC; };
+  pyscard = callPackage ../development/python-modules/pyscard {
+    inherit (pkgs.darwin.apple_sdk.frameworks) PCSC;
+  };
 
   pyschedule = callPackage ../development/python-modules/pyschedule { };
 
@@ -6091,14 +6191,21 @@ in {
 
   pyshp = callPackage ../development/python-modules/pyshp { };
 
-  pyside2-tools =
-    toPythonModule (callPackage ../development/python-modules/pyside2-tools { inherit (pkgs) cmake qt5; });
+  pyside2-tools = toPythonModule (callPackage ../development/python-modules/pyside2-tools {
+    inherit (pkgs) cmake qt5;
+  });
 
-  pyside2 = toPythonModule (callPackage ../development/python-modules/pyside2 { inherit (pkgs) cmake ninja qt5; });
+  pyside2 = toPythonModule (callPackage ../development/python-modules/pyside2 {
+    inherit (pkgs) cmake ninja qt5;
+  });
 
-  pyside = callPackage ../development/python-modules/pyside { inherit (pkgs) mesa; };
+  pyside = callPackage ../development/python-modules/pyside {
+    inherit (pkgs) mesa;
+  };
 
-  pysideShiboken = callPackage ../development/python-modules/pyside/shiboken.nix { inherit (pkgs) libxml2 libxslt; };
+  pysideShiboken = callPackage ../development/python-modules/pyside/shiboken.nix {
+    inherit (pkgs) libxml2 libxslt;
+  };
 
   pysideTools = callPackage ../development/python-modules/pyside/tools.nix { };
 
@@ -6106,7 +6213,9 @@ in {
 
   pysingleton = callPackage ../development/python-modules/pysingleton { };
 
-  pyslurm = callPackage ../development/python-modules/pyslurm { slurm = pkgs.slurm; };
+  pyslurm = callPackage ../development/python-modules/pyslurm {
+    inherit (pkgs) slurm;
+  };
 
   pysma = callPackage ../development/python-modules/pysma { };
 
@@ -6172,7 +6281,9 @@ in {
 
   pystache = callPackage ../development/python-modules/pystache { };
 
-  pystemd = callPackage ../development/python-modules/pystemd { systemd = pkgs.systemd; };
+  pystemd = callPackage ../development/python-modules/pystemd {
+    inherit (pkgs) systemd;
+  };
 
   PyStemmer = callPackage ../development/python-modules/pystemmer { };
 
@@ -6210,18 +6321,27 @@ in {
   pytest = if isPy3k then self.pytest_6 else self.pytest_4;
 
   pytest_4 = callPackage
-    ../development/python-modules/pytest/4.nix { # hypothesis tests require pytest that causes dependency cycle
-      hypothesis = self.hypothesis.override { doCheck = false; };
+    ../development/python-modules/pytest/4.nix {
+      # hypothesis tests require pytest that causes dependency cycle
+      hypothesis = self.hypothesis.override {
+        doCheck = false;
+      };
     };
 
   pytest_5 = callPackage
-    ../development/python-modules/pytest/5.nix { # hypothesis tests require pytest that causes dependency cycle
-      hypothesis = self.hypothesis.override { doCheck = false; };
+    ../development/python-modules/pytest/5.nix {
+      # hypothesis tests require pytest that causes dependency cycle
+      hypothesis = self.hypothesis.override {
+        doCheck = false;
+      };
     };
 
   pytest_6 =
-    callPackage ../development/python-modules/pytest { # hypothesis tests require pytest that causes dependency cycle
-      hypothesis = self.hypothesis.override { doCheck = false; };
+    callPackage ../development/python-modules/pytest {
+      # hypothesis tests require pytest that causes dependency cycle
+      hypothesis = self.hypothesis.override {
+        doCheck = false;
+      };
     };
 
   pytest-aiohttp = callPackage ../development/python-modules/pytest-aiohttp { };
@@ -6512,7 +6632,9 @@ in {
 
   python-lzf = callPackage ../development/python-modules/python-lzf { };
 
-  python-lzo = callPackage ../development/python-modules/python-lzo { inherit (pkgs) lzo; };
+  python-lzo = callPackage ../development/python-modules/python-lzo {
+    inherit (pkgs) lzo;
+  };
 
   python_magic = callPackage ../development/python-modules/python-magic { };
 
@@ -6596,7 +6718,9 @@ in {
     inherit (pkgs) snap7;
   };
 
-  python-snappy = callPackage ../development/python-modules/python-snappy { inherit (pkgs) snappy; };
+  python-snappy = callPackage ../development/python-modules/python-snappy {
+    inherit (pkgs) snappy;
+  };
 
   python-socketio = callPackage ../development/python-modules/python-socketio { };
 
@@ -6654,7 +6778,9 @@ in {
 
   pytools = callPackage ../development/python-modules/pytools { };
 
-  pytorch = callPackage ../development/python-modules/pytorch { cudaSupport = pkgs.config.cudaSupport or false; };
+  pytorch = callPackage ../development/python-modules/pytorch {
+    cudaSupport = pkgs.config.cudaSupport or false;
+  };
 
   pytorch-bin = callPackage ../development/python-modules/pytorch/bin.nix { };
 
@@ -6662,9 +6788,13 @@ in {
 
   pytorch-metric-learning = callPackage ../development/python-modules/pytorch-metric-learning { };
 
-  pytorchWithCuda = self.pytorch.override { cudaSupport = true; };
+  pytorchWithCuda = self.pytorch.override {
+    cudaSupport = true;
+  };
 
-  pytorchWithoutCuda = self.pytorch.override { cudaSupport = false; };
+  pytorchWithoutCuda = self.pytorch.override {
+    cudaSupport = false;
+  };
 
   pytrafikverket = callPackage ../development/python-modules/pytrafikverket { };
 
@@ -6691,7 +6821,9 @@ in {
       });
     };
 
-  pyudev = callPackage ../development/python-modules/pyudev { inherit (pkgs) systemd; };
+  pyudev = callPackage ../development/python-modules/pyudev {
+    inherit (pkgs) systemd;
+  };
 
   pyunbound = callPackage ../tools/networking/unbound/python.nix { };
 
@@ -6701,7 +6833,9 @@ in {
 
   pyupgrade = callPackage ../development/python-modules/pyupgrade { };
 
-  pyusb = callPackage ../development/python-modules/pyusb { libusb1 = pkgs.libusb1; };
+  pyusb = callPackage ../development/python-modules/pyusb {
+    inherit (pkgs) libusb1;
+  };
 
   pyutil = callPackage ../development/python-modules/pyutil { };
 
@@ -6745,8 +6879,9 @@ in {
 
   pywavelets = callPackage ../development/python-modules/pywavelets { };
 
-  # We need "normal" libxml2 and not the python package by the same name.
-  pywbem = callPackage ../development/python-modules/pywbem { libxml2 = pkgs.libxml2; };
+  pywbem = callPackage ../development/python-modules/pywbem {
+    inherit (pkgs) libxml2;
+  };
 
   PyWebDAV = callPackage ../development/python-modules/pywebdav { };
 
@@ -6827,7 +6962,9 @@ in {
 
   qscintilla-qt4 = callPackage ../development/python-modules/qscintilla { };
 
-  qscintilla-qt5 = pkgs.libsForQt5.callPackage ../development/python-modules/qscintilla-qt5 { pythonPackages = self; };
+  qscintilla-qt5 = pkgs.libsForQt5.callPackage ../development/python-modules/qscintilla-qt5 {
+    pythonPackages = self;
+  };
 
   qscintilla = self.qscintilla-qt4;
 
@@ -6843,8 +6980,8 @@ in {
 
   quandl = callPackage ../development/python-modules/quandl { };
 
-  Quandl =
-    callPackage ../development/python-modules/quandl { }; # alias for an older package which did not support Python 3
+  # TODO: rename this
+  Quandl = callPackage ../development/python-modules/quandl { }; # alias for an older package which did not support Python 3
 
   quantities = callPackage ../development/python-modules/quantities { };
 
@@ -6874,9 +7011,13 @@ in {
 
   random2 = callPackage ../development/python-modules/random2 { };
 
-  rarfile = callPackage ../development/python-modules/rarfile { inherit (pkgs) libarchive; };
+  rarfile = callPackage ../development/python-modules/rarfile {
+    inherit (pkgs) libarchive;
+  };
 
-  rasterio = callPackage ../development/python-modules/rasterio { gdal = pkgs.gdal_2; }; # gdal 3.0 not supported yet
+  rasterio = callPackage ../development/python-modules/rasterio {
+    gdal = pkgs.gdal_2;
+  };
 
   ratelimit = callPackage ../development/python-modules/ratelimit { };
 
@@ -7026,7 +7167,9 @@ in {
 
   rising = callPackage ../development/python-modules/rising { };
 
-  rivet = disabledIf (!isPy3k) (toPythonModule (pkgs.rivet.override { python3 = python; }));
+  rivet = disabledIf (!isPy3k) (toPythonModule (pkgs.rivet.override {
+    python3 = python;
+  }));
 
   rjsmin = callPackage ../development/python-modules/rjsmin { };
 
@@ -7088,7 +7231,9 @@ in {
 
   rply = callPackage ../development/python-modules/rply { };
 
-  rpm = disabledIf (!isPy3k) (toPythonModule (pkgs.rpm.override { inherit python; }));
+  rpm = disabledIf (!isPy3k) (toPythonModule (pkgs.rpm.override {
+    inherit python;
+  }));
 
   rpmfluff = callPackage ../development/python-modules/rpmfluff { };
 
@@ -7108,7 +7253,9 @@ in {
 
   rtmidi-python = callPackage ../development/python-modules/rtmidi-python { };
 
-  Rtree = callPackage ../development/python-modules/Rtree { inherit (pkgs) libspatialindex; };
+  Rtree = callPackage ../development/python-modules/Rtree {
+    inherit (pkgs) libspatialindex;
+  };
 
   rtslib = callPackage ../development/python-modules/rtslib { };
 
@@ -7274,7 +7421,9 @@ in {
 
   seccomp = callPackage ../development/python-modules/seccomp { };
 
-  secp256k1 = callPackage ../development/python-modules/secp256k1 { inherit (pkgs) secp256k1; };
+  secp256k1 = callPackage ../development/python-modules/secp256k1 {
+    inherit (pkgs) secp256k1;
+  };
 
   secretstorage = if isPy3k then
     callPackage ../development/python-modules/secretstorage { }
@@ -7303,7 +7452,9 @@ in {
 
   sendgrid = callPackage ../development/python-modules/sendgrid { };
 
-  sentencepiece = callPackage ../development/python-modules/sentencepiece { inherit (pkgs) sentencepiece; };
+  sentencepiece = callPackage ../development/python-modules/sentencepiece {
+    inherit (pkgs) sentencepiece;
+  };
 
   sentinel = callPackage ../development/python-modules/sentinel { };
 
@@ -7365,8 +7516,9 @@ in {
 
   shellingham = callPackage ../development/python-modules/shellingham { };
 
-  shiboken2 =
-    toPythonModule (callPackage ../development/python-modules/shiboken2 { inherit (pkgs) cmake llvmPackages qt5; });
+  shiboken2 = toPythonModule (callPackage ../development/python-modules/shiboken2 {
+    inherit (pkgs) cmake llvmPackages qt5;
+  });
 
   shippai = callPackage ../development/python-modules/shippai { };
 
@@ -7456,7 +7608,9 @@ in {
 
   slither-analyzer = callPackage ../development/python-modules/slither-analyzer { };
 
-  slixmpp = callPackage ../development/python-modules/slixmpp { inherit (pkgs) gnupg; };
+  slixmpp = callPackage ../development/python-modules/slixmpp {
+    inherit (pkgs) gnupg;
+  };
 
   slob = callPackage ../development/python-modules/slob { };
 
@@ -7480,7 +7634,9 @@ in {
 
   smpplib = callPackage ../development/python-modules/smpplib { };
 
-  snack = toPythonModule (pkgs.newt.override { inherit (self) python; });
+  snack = toPythonModule (pkgs.newt.override {
+    inherit (self) python;
+  });
 
   snakebite = callPackage ../development/python-modules/snakebite { };
 
@@ -7599,8 +7755,9 @@ in {
 
   sphinxcontrib-openapi = callPackage ../development/python-modules/sphinxcontrib-openapi { };
 
-  sphinxcontrib_plantuml =
-    callPackage ../development/python-modules/sphinxcontrib_plantuml { inherit (pkgs) plantuml; };
+  sphinxcontrib_plantuml = callPackage ../development/python-modules/sphinxcontrib_plantuml {
+    inherit (pkgs) plantuml;
+  };
 
   sphinxcontrib-qthelp = callPackage ../development/python-modules/sphinxcontrib-qthelp { };
 
@@ -7643,9 +7800,11 @@ in {
   spotipy = callPackage ../development/python-modules/spotipy { };
 
   spyder = callPackage ../development/python-modules/spyder { };
+
   spyder_3 = callPackage ../development/python-modules/spyder/3.nix { };
 
   spyder-kernels = callPackage ../development/python-modules/spyder-kernels { };
+
   spyder-kernels_0_5 = callPackage ../development/python-modules/spyder-kernels/0.x.nix { };
 
   sqlalchemy = callPackage ../development/python-modules/sqlalchemy { };
@@ -7667,6 +7826,7 @@ in {
   sqlitedict = callPackage ../development/python-modules/sqlitedict { };
 
   sqlite-fts4 = callPackage ../development/python-modules/sqlite-fts4 { };
+
   sqlite-utils = callPackage ../development/python-modules/sqlite-utils { };
 
   sqlmap = callPackage ../development/python-modules/sqlmap { };
@@ -7767,7 +7927,9 @@ in {
 
   subprocess32 = callPackage ../development/python-modules/subprocess32 { };
 
-  subunit = callPackage ../development/python-modules/subunit { inherit (pkgs) subunit cppunit check; };
+  subunit = callPackage ../development/python-modules/subunit {
+    inherit (pkgs) subunit cppunit check;
+  };
 
   suds = callPackage ../development/python-modules/suds { };
 
@@ -7818,16 +7980,18 @@ in {
   else
     callPackage ../development/python-modules/sympy/1_5.nix { };
 
-  systemd = callPackage ../development/python-modules/systemd { inherit (pkgs) systemd; };
+  systemd = callPackage ../development/python-modules/systemd {
+    inherit (pkgs) systemd;
+  };
 
   sysv_ipc = callPackage ../development/python-modules/sysv_ipc { };
 
   tableaudocumentapi = callPackage ../development/python-modules/tableaudocumentapi { };
 
   tables = if isPy3k then
-    callPackage ../development/python-modules/tables { hdf5 = pkgs.hdf5.override { zlib = pkgs.zlib; }; }
+    callPackage ../development/python-modules/tables { }
   else
-    callPackage ../development/python-modules/tables/3.5.nix { hdf5 = pkgs.hdf5.override { zlib = pkgs.zlib; }; };
+    callPackage ../development/python-modules/tables/3.5.nix { };
 
   tablib = callPackage ../development/python-modules/tablib { };
 
@@ -7906,9 +8070,13 @@ in {
 
   tensorflow-tensorboard = self.tensorflow-tensorboard_2;
 
-  tensorflowWithCuda = self.tensorflow.override { cudaSupport = true; };
+  tensorflowWithCuda = self.tensorflow.override {
+    cudaSupport = true;
+  };
 
-  tensorflowWithoutCuda = self.tensorflow.override { cudaSupport = false; };
+  tensorflowWithoutCuda = self.tensorflow.override {
+    cudaSupport = false;
+  };
 
   tensorly = callPackage ../development/python-modules/tensorly { };
 
@@ -7993,14 +8161,16 @@ in {
   thumborPexif = callPackage ../development/python-modules/thumborpexif { };
 
   tkinter = let
-    py = python.override{x11Support=true;};
+    py = python.override { x11Support=true; };
   in callPackage ../development/python-modules/tkinter { py = py; };
 
   tidylib = callPackage ../development/python-modules/pytidylib { };
 
   tifffile = callPackage ../development/python-modules/tifffile { };
 
-  tiledb = callPackage ../development/python-modules/tiledb { inherit (pkgs) tiledb; };
+  tiledb = callPackage ../development/python-modules/tiledb {
+    inherit (pkgs) tiledb;
+  };
 
   tilestache = callPackage ../development/python-modules/tilestache { };
 
@@ -8078,7 +8248,9 @@ in {
   # Used by streamlit, graphite_beacon, 2021-01-29
   tornado_5 = callPackage ../development/python-modules/tornado/5.nix { };
 
-  towncrier = callPackage ../development/python-modules/towncrier { inherit (pkgs) git; };
+  towncrier = callPackage ../development/python-modules/towncrier {
+    inherit (pkgs) git;
+  };
 
   tox = callPackage ../development/python-modules/tox { };
 
@@ -8231,7 +8403,9 @@ in {
 
   uarray = callPackage ../development/python-modules/uarray { };
 
-  ueberzug = callPackage ../development/python-modules/ueberzug { inherit (pkgs.xorg) libX11 libXext; };
+  ueberzug = callPackage ../development/python-modules/ueberzug {
+    inherit (pkgs.xorg) libX11 libXext;
+  };
 
   ufonormalizer = callPackage ../development/python-modules/ufonormalizer { };
 
@@ -8610,7 +8784,9 @@ in {
 
   x256 = callPackage ../development/python-modules/x256 { };
 
-  xapian = callPackage ../development/python-modules/xapian { xapian = pkgs.xapian; };
+  xapian = callPackage ../development/python-modules/xapian {
+    inherit (pkgs) xapian;
+  };
 
   xapp = callPackage ../development/python-modules/xapp {
     inherit (pkgs) gtk3 gobject-introspection polkit;
@@ -8635,7 +8811,9 @@ in {
 
   xenomapper = disabledIf (!isPy3k) (callPackage ../applications/science/biology/xenomapper { });
 
-  xgboost = callPackage ../development/python-modules/xgboost { xgboost = pkgs.xgboost; };
+  xgboost = callPackage ../development/python-modules/xgboost {
+    inherit (pkgs) xgboost;
+  };
 
   xhtml2pdf = callPackage ../development/python-modules/xhtml2pdf { };
 
@@ -8685,7 +8863,9 @@ in {
 
   xstatic-pygments = callPackage ../development/python-modules/xstatic-pygments { };
 
-  xvfbwrapper = callPackage ../development/python-modules/xvfbwrapper { inherit (pkgs.xorg) xorgserver; };
+  xvfbwrapper = callPackage ../development/python-modules/xvfbwrapper {
+    inherit (pkgs.xorg) xorgserver;
+  };
 
   xxhash = callPackage ../development/python-modules/xxhash { };
 
@@ -8744,7 +8924,9 @@ in {
 
   z3c-checkversions = callPackage ../development/python-modules/z3c-checkversions { };
 
-  z3 = (toPythonModule (pkgs.z3.override { inherit python; })).python;
+  z3 = (toPythonModule (pkgs.z3.override {
+    inherit python;
+  })).python;
 
   zake = callPackage ../development/python-modules/zake { };
 
@@ -8770,7 +8952,9 @@ in {
 
   zeep = callPackage ../development/python-modules/zeep { };
 
-  zeitgeist = (toPythonModule (pkgs.zeitgeist.override { python3 = python; })).py;
+  zeitgeist = (toPythonModule (pkgs.zeitgeist.override {
+    python3 = python;
+  })).py;
 
   zerobin = callPackage ../development/python-modules/zerobin { };
 
@@ -8863,10 +9047,11 @@ in {
 
   zstandard = callPackage ../development/python-modules/zstandard { };
 
-  zstd = callPackage ../development/python-modules/zstd { inherit (pkgs) zstd; };
+  zstd = callPackage ../development/python-modules/zstd {
+    inherit (pkgs) zstd;
+  };
 
   zulip = callPackage ../development/python-modules/zulip { };
 
   zxcvbn = callPackage ../development/python-modules/zxcvbn { };
-
 }