diff options
| -rw-r--r-- | pkgs/applications/science/molecular-dynamics/viennarna/default.nix | 4 | ||||
| -rw-r--r-- | pkgs/top-level/aliases.nix | 1 | ||||
| -rw-r--r-- | pkgs/top-level/all-packages.nix | 2 | ||||
| -rw-r--r-- | pkgs/top-level/python-aliases.nix | 1 | ||||
| -rw-r--r-- | pkgs/top-level/python-packages.nix | 2 |
5 files changed, 6 insertions, 4 deletions
diff --git a/pkgs/applications/science/molecular-dynamics/viennarna/default.nix b/pkgs/applications/science/molecular-dynamics/viennarna/default.nix index 3d20eeabe2685..f292cbb378c9a 100644 --- a/pkgs/applications/science/molecular-dynamics/viennarna/default.nix +++ b/pkgs/applications/science/molecular-dynamics/viennarna/default.nix @@ -8,11 +8,11 @@ }: stdenv.mkDerivation rec { - pname = "ViennaRNA"; + pname = "viennarna"; version = "2.5.1"; src = fetchurl { - url = "https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_5_x/${pname}-${version}.tar.gz"; + url = "https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_5_x/ViennaRNA-${version}.tar.gz"; sha256 = "sha256-BUAEN88VWV4QsaJd9snEiFbzVhMPnR44D6iGa20n9Fc="; }; diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix index 5bd2366c1bbe9..c04676e2597f7 100644 --- a/pkgs/top-level/aliases.nix +++ b/pkgs/top-level/aliases.nix @@ -1857,6 +1857,7 @@ mapAliases ({ ventoy-bin-full = ventoy-full; # Added 2023-04-12 venus = throw "venus has been removed from nixpkgs, as it's unmaintained"; # Added 2021-02-05 vgo2nix = throw "vgo2nix has been removed, because it was deprecated. Consider using gomod2nix instead"; # added 2022-08-24 + ViennaRNA = viennarna; # Added 2023-08-23 vimHugeX = vim-full; # Added 2022-12-04 vim_configurable = vim-full; # Added 2022-12-04 vimbWrapper = throw "'vimbWrapper' has been renamed to/replaced by 'vimb'"; # Converted to throw 2022-02-22 diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 56920d0d95bb3..79384397c0a46 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -41510,7 +41510,7 @@ with pkgs; viddy = callPackage ../tools/misc/viddy { }; - ViennaRNA = callPackage ../applications/science/molecular-dynamics/viennarna { }; + viennarna = callPackage ../applications/science/molecular-dynamics/viennarna { }; viewnior = callPackage ../applications/graphics/viewnior { }; diff --git a/pkgs/top-level/python-aliases.nix b/pkgs/top-level/python-aliases.nix index d79138fdf3ead..74e3d05a3bb2b 100644 --- a/pkgs/top-level/python-aliases.nix +++ b/pkgs/top-level/python-aliases.nix @@ -387,6 +387,7 @@ mapAliases ({ uproot3 = throw "uproot3 has been removed, use uproot instead"; # added 2022-12-13 uproot3-methods = throw "uproot3-methods has been removed"; # added 2022-12-13 validictory = throw "validictory has been removed, since it abandoned"; # added 2023-07-07 + ViennaRNA = viennarna; # added 2023-08-23 virtual-display = throw "virtual-display has been renamed to PyVirtualDisplay"; # added 2023-01-07 Wand = wand; # added 2022-11-13 wasm = throw "wasm has been removed because it no longer builds and is unmaintained"; # added 2023-05-20 diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 049f3318c07af..7f22f9ded8960 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -13616,7 +13616,7 @@ self: super: with self; { vidstab = callPackage ../development/python-modules/vidstab { }; - ViennaRNA = toPythonModule pkgs.ViennaRNA; + viennarna = toPythonModule pkgs.viennarna; viewstate = callPackage ../development/python-modules/viewstate { }; |