diff options
Diffstat (limited to 'pkgs/development/python-modules/hyppo/default.nix')
-rw-r--r-- | pkgs/development/python-modules/hyppo/default.nix | 61 |
1 files changed, 38 insertions, 23 deletions
diff --git a/pkgs/development/python-modules/hyppo/default.nix b/pkgs/development/python-modules/hyppo/default.nix index 8b2d73f68c5a..5288be1c30a3 100644 --- a/pkgs/development/python-modules/hyppo/default.nix +++ b/pkgs/development/python-modules/hyppo/default.nix @@ -1,49 +1,64 @@ -{ lib -, buildPythonPackage -, pythonOlder -, fetchFromGitHub -, pytestCheckHook -, autograd -, numba -, numpy -, scikit-learn -, scipy -, matplotlib -, seaborn +{ + lib, + autograd, + buildPythonPackage, + fetchFromGitHub, + future, + matplotlib, + numba, + numpy, + pytestCheckHook, + pythonOlder, + scikit-learn, + scipy, + seaborn, + setuptools, }: buildPythonPackage rec { pname = "hyppo"; - version = "0.4.0"; - format = "setuptools"; + version = "0.5.1"; + pyproject = true; - disabled = pythonOlder "3.6"; + disabled = pythonOlder "3.8"; src = fetchFromGitHub { owner = "neurodata"; - repo = pname; + repo = "hyppo"; rev = "refs/tags/v${version}"; - hash = "sha256-QRE3oSxTEobTQ/7DzCAUOdjzIZmWUn9bgPmJWj6JuZg="; + hash = "sha256-bYxqYSOOifQE3gbw8vNk/A13D5TPx7ERSgFvRHMXKGM="; }; - propagatedBuildInputs = [ + # some of the doctests (4/21) are broken, e.g. unbound variables, nondeterministic with insufficient tolerance, etc. + # (note upstream's .circleci/config.yml only tests test_*.py files despite their pytest.ini adding --doctest-modules) + postPatch = '' + substituteInPlace pytest.ini --replace-fail "addopts = --doctest-modules" "" + ''; + + build-system = [ setuptools ]; + + dependencies = [ autograd + future numba numpy scikit-learn scipy ]; - nativeCheckInputs = [ pytestCheckHook matplotlib seaborn ]; - disabledTestPaths = [ - "docs" - "benchmarks" - "examples" + nativeCheckInputs = [ + pytestCheckHook + matplotlib + seaborn + ]; + pytestFlagsArray = [ + "hyppo" ]; meta = with lib; { homepage = "https://github.com/neurodata/hyppo"; description = "Python package for multivariate hypothesis testing"; + changelog = "https://github.com/neurodata/hyppo/releases/tag/v${version}"; license = licenses.mit; maintainers = with maintainers; [ bcdarwin ]; }; |