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2022-04-10Merge pull request #164722 from armeenm/bump-eggnog-mapperArtturi1-16/+30
2022-04-03ncbi_tools: remove after being marked broken for over two yearsajs1241-34/+0
2022-03-31Merge pull request #166508 from siraben/automake-buildinputsBen Siraphob1-1/+2
2022-03-30treewide: move autoconf, automake to nativeBuildInputsBen Siraphob1-1/+2
2022-03-29Merge pull request #165458 from rbreslow/add-flywheel-cliSandro1-0/+49
2022-03-28flywheel-cli: init at 16.2.0Rocky Breslow1-0/+49
2022-03-23treewide: rename name to pname&versionFelix Buehler1-3/+3
2022-03-18eggnog-mapper: 1.0.3 -> 2.1.7Armeen Mahdian1-16/+30
2022-03-04angsd: init at 0.937Bruno Bzeznik1-0/+25
2022-03-04minimap2: enable aarch64 builds (#161169)Matthew Wakefield1-1/+2
2022-03-02last: 1260 -> 1268Justin Bedo1-4/+4
2022-02-28raxml-mpi: remove appendToName to have a consistent package name for repologyFelix Buehler1-2/+2
2022-02-28neuron-mpi: remove appendToName to have a consistent package name for repologyFelix Buehler1-1/+1
2022-02-25bcftools: 1.14 -> 1.15R. Ryantm1-2/+2
2022-02-24picard-tools: 2.26.10 -> 2.26.11R. Ryantm1-2/+2
2022-02-21febio-studio: init at 1.6.1Scriptkiddi2-0/+99
2022-02-18SPAdes: 3.15.3 -> 3.15.4R. RyanTM1-2/+2
2022-02-14messer-slim: 3.7 -> 3.7.1R. Ryantm1-2/+2
2022-02-13Merge pull request #159675 from r-ryantm/auto-update/picard-toolsJustin Bedő1-2/+2
2022-02-13Merge pull request #159562 from r-ryantm/auto-update/mosdepthJustin Bedő1-2/+2
2022-02-12picard-tools: 2.26.9 -> 2.26.10R. Ryantm1-2/+2
2022-02-12mosdepth: 0.3.2 -> 0.3.3R. Ryantm1-2/+2
2022-02-12last: 1256 -> 1260R. Ryantm1-2/+2
2022-02-06hisat2: update homepageRenaud1-2/+2
2022-01-31kallisto: 0.46.2 -> 0.48.0R. Ryantm1-2/+2
2022-01-31repseek: init at 9Sep2014 (#148017)Bruno Bzeznik1-0/+27
2022-01-29Merge pull request #156381 from r-ryantm/auto-update/bowtie2markuskowa1-2/+2
2022-01-24star: 2.7.9a -> 2.7.10aR. RyanTM1-2/+2
2022-01-23bowtie2: 2.4.4 -> 2.4.5R. Ryantm1-2/+2
2022-01-22Merge pull request #156014 from r-ryantm/auto-update/deeptoolsMario Rodas1-2/+2
2022-01-23sambamba: 0.8.1 -> 0.8.2 (#155972)Justin Bedő1-12/+12
2022-01-21deeptools: 3.5.0 -> 3.5.1R. Ryantm1-2/+2
2022-01-17Merge pull request #154687 from dotlambda/python-aliasFrederik Rietdijk2-9/+9
2022-01-17minimap2: 2.23 -> 2.24R. RyanTM1-2/+3
2022-01-16python,pythonPackages: make aliasesRobert Schütz1-3/+3
2022-01-16tebreak: also use python3 for testsRobert Schütz1-6/+6
2022-01-16lumpy: dropMartin Weinelt1-50/+0
2022-01-03Merge pull request #152801 from r-ryantm/auto-update/messer-slimmarkuskowa1-2/+2
2022-01-02stacks: 2.59 -> 2.60R. RyanTM1-2/+2
2022-01-01python3Packages.xenomapper: move to top-levelMartin Weinelt1-3/+3
2021-12-30messer-slim: 3.6 -> 3.7R. Ryantm1-2/+2
2021-12-27Merge pull request #149379 from r-ryantm/auto-update/minimap2Bobby Rong1-2/+2
2021-12-23diamond: switch to fetchFromGitHubFelix Buehler1-4/+6
2021-12-23kssd: switch to fetchFromGitHubFelix Buehler1-4/+6
2021-12-23messer-slim: switch to fetchFromGitHubFelix Buehler1-4/+6
2021-12-23niftyseg: switch to fetchFromGitHubFelix Buehler1-4/+7
2021-12-22picard-tools: 2.26.6 -> 2.26.9Justin Bedo1-2/+2
2021-12-15Merge pull request #150628 from jbedo/subreadJustin Bedő1-0/+40
2021-12-14subread: init 2.0.3Justin Bedo1-0/+40
2021-12-12seaview: 5.0.4 -> 5.0.5R. Ryantm1-2/+2
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