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2023-04-05varscan: 2.4.5 -> 2.4.6R. Ryantm1-2/+2
2023-04-03Merge pull request #224345 from natsukium/blast/darwinWeijia Wang1-0/+60
2023-04-03blast-bin: init at 2.13.0natsukium1-0/+60
2023-04-03last: 1447 -> 1453Justin Bedo1-2/+2
2023-03-25Merge master into staging-nextgithub-actions[bot]1-2/+2
2023-03-24Merge pull request #222464 from r-ryantm/auto-update/diamondWeijia Wang1-2/+2
2023-03-22Merge master into staging-nextgithub-actions[bot]1-3/+3
2023-03-22Merge pull request #222331 from r-ryantm/auto-update/seqkitNick Cao1-3/+3
2023-03-22diamond: 2.1.5 -> 2.1.6R. Ryantm1-2/+2
2023-03-21seqkit: 2.3.1 -> 2.4.0R. Ryantm1-3/+3
2023-03-20Merge remote-tracking branch 'origin/master' into staging-nextMartin Weinelt1-2/+2
2023-03-20Merge pull request #221743 from r-ryantm/auto-update/gatkWeijia Wang1-2/+2
2023-03-19Merge master into staging-nextgithub-actions[bot]1-0/+21
2023-03-19trf: init at 4.09.1natsukium1-0/+21
2023-03-19Merge master into staging-nextgithub-actions[bot]1-3/+3
2023-03-19Merge pull request #221864 from natsukium/mafft/updateWeijia Wang1-3/+3
2023-03-18Merge master into staging-nextgithub-actions[bot]1-4/+5
2023-03-19mafft: 7.508 -> 7.515natsukium1-3/+3
2023-03-18nest: specify licenseFabian Affolter1-1/+1
2023-03-18nest: add changelog to metaFabian Affolter1-1/+2
2023-03-18nest: 3.3 -> 3.4Weijia Wang1-3/+3
2023-03-18gatk: 4.3.0.0 -> 4.4.0.0R. Ryantm1-2/+2
2023-03-17Merge master into staging-nextgithub-actions[bot]1-2/+2
2023-03-16subread: 2.0.3 -> 2.0.4R. Ryantm1-2/+2
2023-03-16Merge #218309: ffmpeg: ffmpeg_4 → ffmpeg_5Vladimír Čunát1-2/+2
2023-03-14Merge remote-tracking branch 'origin/master' into staging-nextMartin Weinelt1-6/+6
2023-03-14Merge pull request #220570 from Artturin/fixlints1Artturi1-6/+6
2023-03-13treewide: make ffmpeg_4-dependant packages depend on ffmpeg_4Atemu1-2/+2
2023-03-12Merge branch 'master' into staging-nextVladimír Čunát1-2/+2
2023-03-11diamond: 2.1.4 -> 2.1.5R. Ryantm1-2/+2
2023-03-11treewide: fix lintsArtturin1-6/+6
2023-03-05Merge remote-tracking branch 'origin/master' into staging-nextMartin Weinelt1-2/+2
2023-03-04diamond: 2.1.3 -> 2.1.4R. Ryantm1-2/+2
2023-03-04Merge remote-tracking branch 'origin/staging' into staging-nextMartin Weinelt3-5/+5
2023-03-01picard-tools: 2.27.5 -> 3.0.0R. Ryantm1-2/+2
2023-02-27Merge pull request #218118 from r-ryantm/auto-update/diamondWeijia Wang1-2/+2
2023-02-27Merge pull request #218500 from alyssais/pythonForBuildArtturi1-1/+1
2023-02-27Merge pull request #218342 from r-ryantm/auto-update/bcftoolsWeijia Wang1-2/+2
2023-02-26treewide: python{ => .pythonForBuild}.interpreterAlyssa Ross1-1/+1
2023-02-26neuron-full: 8.2.1 -> 8.2.2R. Ryantm1-2/+2
2023-02-25bcftools: 1.16 -> 1.17R. Ryantm1-2/+2
2023-02-25Merge pull request #217897 from DavidCromp/nestWeijia Wang1-4/+19
2023-02-25nest: fix Python & DarwinDavidCromp1-4/+19
2023-02-25Merge pull request #218240 from amesgen/tandem-aligner-fix-build-gcc-12Artturi1-0/+10
2023-02-25tandem-aligner: fix build with GCC 12amesgen1-0/+10
2023-02-24diamond: 2.1.1 -> 2.1.3R. Ryantm1-2/+2
2023-02-22treewide: move NIX_CFLAGS_COMPILE to the env attrsetArtturin9-9/+9
2023-02-22treewide: use toString on list NIX_CFLAGS_COMPILEArtturin6-6/+6
2023-02-21neuron: 7.5 -> 8.2.1DavidCrompton1192@gmail.com3-93/+93
2023-02-19treewide:replace http by https when https is a permanent redirectionFerry Jérémie2-2/+2
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