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2023-12-15gatk: 4.4.0.0 -> 4.5.0.0R. Ryantm1-2/+2
2023-12-12Merge pull request #273382 from wegank/strelka-aarch64Weijia Wang1-3/+23
2023-12-12Merge pull request #273485 from r-ryantm/auto-update/kalignOTABI Tomoya1-2/+2
2023-12-11strelka: add aarch64-linux supportWeijia Wang1-3/+13
2023-12-11kalign: 3.3.5 -> 3.4.0R. Ryantm1-2/+2
2023-12-11poretools: mark as brokenAaron Jheng1-2/+3
2023-12-10strelka: fix build on gcc-12Sergei Trofimovich1-1/+11
2023-12-05last: 1499 -> 1518R. Ryantm1-2/+2
2023-12-04Merge pull request #266665 from r-ryantm/auto-update/seqkitWeijia Wang1-3/+3
2023-12-04Merge pull request #264994 from r-ryantm/auto-update/kallistoWeijia Wang1-2/+2
2023-11-30Merge pull request #186462 from apraga/bio-bigfile-1.07Doron Behar1-5/+1
2023-11-28mosdepth: build with a lockfileEmery Hemingway1-25/+0
2023-11-26igv: Fix missing wrapGAppsHook causing causing GLib-GIO-ERRORStian Lågstad1-1/+2
2023-11-25Merge pull request #269640 from natsukium/dssp/updateOTABI Tomoya1-2/+2
2023-11-24dssp: 4.4.4.1 -> 4.4.5natsukium1-2/+2
2023-11-21perlPackages.BioBigFile: Addressing reviewer changeAlexis Praga1-27/+0
2023-11-21perlPackages.BioBigfile: init at 1.07Alexis Praga1-0/+27
2023-11-17treewide: s_targetPlatform_hostPlatform_ in non-compiler packagesAdam Joseph1-1/+1
2023-11-15picard-tools: 3.1.0 -> 3.1.1R. Ryantm1-2/+2
2023-11-12kent: enable patches if needed.Alexis Praga1-5/+1
2023-11-10seqkit: 2.5.1 -> 2.6.0R. Ryantm1-3/+3
2023-11-09bedtools: 2.31.0 -> 2.31.1R. Ryantm1-2/+2
2023-11-08Merge pull request #264872 from r-ryantm/auto-update/lastJustin Bedő1-2/+2
2023-11-05treewide: change pythonForBuild to pythonOnBuildForHostAdam Joseph1-1/+1
2023-11-03Merge pull request #243431 from natsukium/kssd/updateOTABI Tomoya1-15/+34
2023-11-03kssd: enable aarch64-linux support & testsnatsukium1-1/+12
2023-11-03kssd: refactornatsukium1-7/+16
2023-11-03kssd: 1.1 -> 2.21natsukium1-7/+6
2023-11-02kallisto: 0.50.0 -> 0.50.1R. Ryantm1-2/+2
2023-11-01last: 1471 -> 1499R. Ryantm1-2/+2
2023-11-01mmseqs2: 14-7e284 -> 15-6f452R. Ryantm1-2/+2
2023-10-28Merge pull request #262311 from scalavision/update-deeptoolsGuillaume Girol1-4/+7
2023-10-28Merge pull request #262697 from natsukium/dssp/updateOTABI Tomoya1-2/+11
2023-10-28Merge pull request #261508 from r-ryantm/auto-update/raxmlWeijia Wang1-2/+2
2023-10-25delly: 1.1.7 -> 1.1.8R. Ryantm1-2/+2
2023-10-22dssp: 4.4.3 -> 4.4.4.1natsukium1-2/+11
2023-10-21Merge pull request #227090 from natsukium/bowtie2/aarch64OTABI Tomoya1-8/+44
2023-10-20Merge pull request #262351 from h7x4/remove-nix-exec-bitsDmitry Kalinkin3-0/+0
2023-10-20treewide: remove execute bit for non-executable `*.nix` filesh7x43-0/+0
2023-10-20Merge pull request #249750 from natsukium/bioawk/initOTABI Tomoya1-0/+50
2023-10-20bowtie2: enable testsnatsukium1-0/+16
2023-10-20bowtie2: fix build on aarch64natsukium1-2/+12
2023-10-20bowtie2: refactornatsukium1-6/+16
2023-10-18deeptools: 3.5.1 -> 3.5.4scalavision1-4/+7
2023-10-16raxml: 8.2.12 -> 8.2.13R. Ryantm1-2/+2
2023-10-14bowtie2: 2.5.1 -> 2.5.2R. Ryantm1-2/+2
2023-10-12Merge pull request #259418 from natsukium/blast-bin/updateOTABI Tomoya1-5/+6
2023-10-07blast-bin: add sourceProvenance to metanatsukium1-0/+1
2023-10-07blast-bin: 2.13.0 -> 2.14.1natsukium1-5/+5
2023-10-07truvari: 4.0.0 -> 4.1.0natsukium1-18/+8
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