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AgeCommit message (Expand)AuthorFilesLines
2022-06-04treewide: set sourceProvenance for packages containing downloaded jarsRobert Scott6-0/+9
2022-06-03Merge pull request #175259 from trofi/workaround-fno-common-for-svabaSergei Trofimovich1-0/+6
2022-05-31Merge pull request #175477 from bzizou/astralckie1-0/+56
2022-05-31astral: init at 5.7.1Bruno Bzeznik1-0/+56
2022-05-30treewide: pkgs/applications: mark broken for aarch64-linuxRick van Schijndel4-0/+4
2022-05-29treewide: pkgs/applications: mark broken for darwinRick van Schijndel5-1/+6
2022-05-29svaba: add -fcommon workaroundSergei Trofimovich1-0/+6
2022-05-28Merge pull request #173867 from trofi/fix-fno-common-for-kssdRick van Schijndel1-1/+11
2022-05-25Merge pull request #174036 from trofi/workaround-fno-common-for-pamlSandro1-0/+6
2022-05-22paml: add -fcommon workaroundSergei Trofimovich1-0/+6
2022-05-22mni_autoreg: pull upstream workaround for -fno-common toolchainsSergei Trofimovich1-1/+11
2022-05-22Merge pull request #173017 from trofi/workaround-fno-common-for-freebayesBobby Rong1-0/+6
2022-05-21kssd: pull upstream fix for -fno-common tollchainsSergei Trofimovich1-1/+11
2022-05-17ezminc: mark brokenBen Darwin1-0/+1
2022-05-14freebayes: add -fcommon workaroundSergei Trofimovich1-0/+6
2022-05-13bayescan: fix the buildThomas Gerbet1-0/+2
2022-05-11bowtie: fix build on case insensitive file systemsTheodore Ni1-0/+10
2022-05-11bowtie: add arm64 patch to build on M1 MacsTheodore Ni1-1/+11
2022-05-08bwa: pull upstream fix for -fno-common tollchainsSergei Trofimovich1-1/+11
2022-05-04Static bwaLuis Pedro Coelho1-0/+2
2022-05-04Static build for samtoolsLuis Pedro Coelho1-1/+8
2022-05-04Static build for megahitLuis Pedro Coelho1-0/+3
2022-04-30Merge branch 'master' into staging-next-2022-04-23Vladimír Čunát1-2/+2
2022-04-29blast: 2.12.0 -> 2.13.0R. Ryantm1-2/+2
2022-04-25Merge master into staging-nextgithub-actions[bot]2-7/+78
2022-04-25Merge pull request #165477 from rbreslow/dcm2niix-optional-modulesSandro2-7/+78
2022-04-18dcm2niix: support usage of suggested Cloudflare zlibRocky Breslow2-16/+67
2022-04-18dcm2niix: add maintainerRocky Breslow1-3/+2
2022-04-16treewide: remove nativeBuildInputs that are in stdenvBen Siraphob2-5/+3
2022-04-15cmtk: add `-std=c++11` to fix build on gcc11Fabián Heredia Montiel1-1/+4
2022-04-14treewide: add meta.mainProgram to many packagesMalo Bourgon3-0/+3
2022-04-10Merge pull request #164722 from armeenm/bump-eggnog-mapperArtturi1-16/+30
2022-04-04dcm2niix: add support for configuring optional compile-time modulesRocky Breslow1-3/+24
2022-04-03ncbi_tools: remove after being marked broken for over two yearsajs1241-34/+0
2022-03-31Merge pull request #166508 from siraben/automake-buildinputsBen Siraphob1-1/+2
2022-03-30treewide: move autoconf, automake to nativeBuildInputsBen Siraphob1-1/+2
2022-03-29Merge pull request #165458 from rbreslow/add-flywheel-cliSandro1-0/+49
2022-03-28flywheel-cli: init at 16.2.0Rocky Breslow1-0/+49
2022-03-23treewide: rename name to pname&versionFelix Buehler1-3/+3
2022-03-18eggnog-mapper: 1.0.3 -> 2.1.7Armeen Mahdian1-16/+30
2022-03-04angsd: init at 0.937Bruno Bzeznik1-0/+25
2022-03-04minimap2: enable aarch64 builds (#161169)Matthew Wakefield1-1/+2
2022-03-02last: 1260 -> 1268Justin Bedo1-4/+4
2022-02-28raxml-mpi: remove appendToName to have a consistent package name for repologyFelix Buehler1-2/+2
2022-02-28neuron-mpi: remove appendToName to have a consistent package name for repologyFelix Buehler1-1/+1
2022-02-25bcftools: 1.14 -> 1.15R. Ryantm1-2/+2
2022-02-24picard-tools: 2.26.10 -> 2.26.11R. Ryantm1-2/+2
2022-02-21febio-studio: init at 1.6.1Scriptkiddi2-0/+99
2022-02-18SPAdes: 3.15.3 -> 3.15.4R. RyanTM1-2/+2
2022-02-14messer-slim: 3.7 -> 3.7.1R. Ryantm1-2/+2
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