about summary refs log tree commit diff
path: root/pkgs/development/python-modules/datashader/default.nix
blob: 1fc9b1e80de050c17675dd1361c6c13982992967 (plain) (blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
{
  lib,
  buildPythonPackage,
  fetchPypi,
  dask,
  bokeh,
  toolz,
  datashape,
  numba,
  numpy,
  pandas,
  pillow,
  xarray,
  colorcet,
  param,
  pyct,
  scipy,
  pytestCheckHook,
  pythonOlder,
  nbsmoke,
  fastparquet,
  nbconvert,
  pytest-xdist,
  netcdf4,
}:

buildPythonPackage rec {
  pname = "datashader";
  version = "0.16.2";
  format = "setuptools";

  disabled = pythonOlder "3.7";

  src = fetchPypi {
    inherit pname version;
    hash = "sha256-eJmXm0wa26a0/S6GyqP175TE5qsjTLtzBspr/iQ/xN8=";
  };

  propagatedBuildInputs = [
    dask
    bokeh
    toolz
    datashape
    numba
    numpy
    pandas
    pillow
    xarray
    colorcet
    param
    pyct
    scipy
  ] ++ dask.optional-dependencies.complete;

  nativeCheckInputs = [
    pytestCheckHook
    pytest-xdist
    nbsmoke
    fastparquet
    nbconvert
    netcdf4
  ];

  # The complete extra is for usage with conda, which we
  # don't care about
  postPatch = ''
    substituteInPlace setup.py \
      --replace "dask[complete]" "dask" \
      --replace "xarray >=0.9.6" "xarray"
  '';

  preCheck = ''
    export HOME=$TMPDIR
  '';

  pytestFlagsArray = [ "datashader" ];

  disabledTests = [
    # Not compatible with current version of bokeh
    # see: https://github.com/holoviz/datashader/issues/1031
    "test_interactive_image_update"
    # Latest dask broken array marshalling
    # see: https://github.com/holoviz/datashader/issues/1032
    "test_raster_quadmesh_autorange_reversed"
  ];

  disabledTestPaths = [
    # 31/50 tests fail with TypeErrors
    "datashader/tests/test_datatypes.py"
  ];

  pythonImportsCheck = [ "datashader" ];

  meta = with lib; {
    description = "Data visualization toolchain based on aggregating into a grid";
    mainProgram = "datashader";
    homepage = "https://datashader.org";
    license = licenses.bsd3;
    maintainers = with maintainers; [ ];
  };
}