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|
{
lib,
buildPythonPackage,
fetchFromGitHub,
fetchpatch,
pythonOlder,
ninja,
numpy,
packaging,
pybind11,
torch,
which,
}:
buildPythonPackage rec {
pname = "monai";
version = "1.4.0";
pyproject = true;
disabled = pythonOlder "3.9";
src = fetchFromGitHub {
owner = "Project-MONAI";
repo = "MONAI";
rev = "refs/tags/${version}";
hash = "sha256-PovYyRLgoYwxqGeCBpWxX/kdClYtYK1bgy8yRa9eue8=";
# note: upstream consistently seems to modify the tag shortly after release,
# so best to wait a few days before updating
};
preBuild = ''
export MAX_JOBS=$NIX_BUILD_CORES;
'';
build-system = [
ninja
which
];
buildInputs = [ pybind11 ];
dependencies = [
numpy
packaging
torch
];
env.BUILD_MONAI = 1;
doCheck = false; # takes too long; tries to download data
pythonImportsCheck = [
"monai"
"monai.apps"
"monai.data"
"monai.engines"
"monai.handlers"
"monai.inferers"
"monai.losses"
"monai.metrics"
"monai.optimizers"
"monai.networks"
"monai.transforms"
"monai.utils"
"monai.visualize"
];
meta = with lib; {
description = "Pytorch framework (based on Ignite) for deep learning in medical imaging";
homepage = "https://github.com/Project-MONAI/MONAI";
changelog = "https://github.com/Project-MONAI/MONAI/releases/tag/${version}";
license = licenses.asl20;
maintainers = [ maintainers.bcdarwin ];
};
}
|
